Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30460 | Sorghum | nucleus | 76.07 | 73.52 |
| Os02t0564700-01 | Rice | nucleus | 55.83 | 52.1 |
| Bra020398.1-P | Field mustard | nucleus | 22.7 | 39.64 |
| CDY11836 | Canola | nucleus | 22.29 | 38.11 |
| Bra002679.1-P | Field mustard | nucleus | 22.49 | 38.06 |
| CDY55014 | Canola | nucleus | 22.49 | 38.06 |
| AT5G58010.1 | Thale cress | nucleus | 22.7 | 37.37 |
| GSMUA_Achr9P18080_001 | Banana | nucleus | 37.01 | 37.32 |
| CDY02785 | Canola | nucleus | 22.49 | 37.16 |
| Bra006788.1-P | Field mustard | nucleus | 22.7 | 37.0 |
| CDX88653 | Canola | nucleus | 22.7 | 37.0 |
| Zm00001d018967_P001 | Maize | nucleus | 21.47 | 36.84 |
| CDY32733 | Canola | nucleus | 22.7 | 36.76 |
| Zm00001d013073_P002 | Maize | nucleus | 21.27 | 36.49 |
| CDY62262 | Canola | nucleus | 22.49 | 36.42 |
| Zm00001d045046_P001 | Maize | nucleus | 35.58 | 36.17 |
| Zm00001d020490_P001 | Maize | nucleus | 24.34 | 34.59 |
| Zm00001d037098_P003 | Maize | nucleus | 35.99 | 33.78 |
| GSMUA_Achr3P10120_001 | Banana | nucleus | 37.63 | 33.76 |
| Zm00001d018374_P001 | Maize | nucleus | 25.97 | 32.65 |
| VIT_11s0016g00380.t01 | Wine grape | nucleus | 35.58 | 32.46 |
| Zm00001d052038_P001 | Maize | nucleus | 21.27 | 31.14 |
| Zm00001d005750_P002 | Maize | mitochondrion | 25.36 | 30.32 |
| Zm00001d045107_P001 | Maize | nucleus | 19.63 | 28.92 |
| Zm00001d000291_P001 | Maize | nucleus | 26.58 | 27.72 |
| Zm00001d002288_P002 | Maize | nucleus | 8.59 | 19.63 |
| Zm00001d026317_P003 | Maize | nucleus, plastid | 7.98 | 16.46 |
| Zm00001d045212_P001 | Maize | nucleus | 10.63 | 15.34 |
| Zm00001d018416_P001 | Maize | mitochondrion | 9.2 | 13.64 |
| Zm00001d013130_P001 | Maize | nucleus | 9.82 | 12.4 |
| Zm00001d034298_P001 | Maize | nucleus | 10.63 | 12.32 |
| Zm00001d031044_P001 | Maize | nucleus | 9.82 | 12.03 |
| Zm00001d024783_P001 | Maize | nucleus | 12.07 | 11.68 |
| Zm00001d029898_P001 | Maize | nucleus | 10.84 | 10.82 |
| Zm00001d040536_P005 | Maize | nucleus | 12.47 | 10.76 |
| Zm00001d033267_P001 | Maize | nucleus | 11.45 | 10.22 |
| Zm00001d008205_P001 | Maize | nucleus | 13.29 | 10.19 |
| Zm00001d029897_P001 | Maize | nucleus | 2.04 | 3.66 |
Protein Annotations
| EntrezGene:103627314 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1D6HAY7 | ProteinID:AQK71867.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF28 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000220D9E6 | EnsemblPlantsGene:Zm00001d016873 | EnsemblPlants:Zm00001d016873_P001 | EnsemblPlants:Zm00001d016873_T001 | InterPro:bHLH_dom | SEG:seg |
Description
bHLH-transcription factor 152Transcription factor bHLH69
Coordinates
chr5:-:178968180..178971530
Molecular Weight (calculated)
51008.0 Da
IEP (calculated)
4.799
GRAVY (calculated)
-0.261
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGFVDPFVP EQAWPQDAMF IGSSWPCAGA GATSLADPAG TYAYLGAQAA PGQGAGFHLQ DGSSTALVPP LELHQQFLSA HLPGDDVTVT QEEGLGFEVN
101: SALVAGMLGP VLSAPCAVSL ADSAPVVCSS SNDSSGGSEQ SGLPPPPRFL VLGEQPASWP SAFPRISSLA GEETSRSFGF GAVSDNDLVR GSSCVADVNK
201: YPQIGNARLH VEDDVEFNTG KMLSFAPGLD FGDLQLSQKE LSGLRHLNSG QQLSSFDATR NPEQSSNEAS GGGTGLNAPP FMVPANGAAG NGAPKPRVRA
301: RRGQATDPHS IAERLRREKI SDRMKNLQEL VPNSNRTDKA SMLDEIIEYV KFLQLQVKVL SMSRLGATEA VVPLLTQSQT ENSGGGLLLS PRSGSGRQQQ
401: ARGGSLPPPS SEVRDGAAFE QEVAQLMESD MTTAMQYLQS KGLCLMPVAL ASAISGQKGA SSAAVQPENG GAKEMLRAVK PLASPIHGR
101: SALVAGMLGP VLSAPCAVSL ADSAPVVCSS SNDSSGGSEQ SGLPPPPRFL VLGEQPASWP SAFPRISSLA GEETSRSFGF GAVSDNDLVR GSSCVADVNK
201: YPQIGNARLH VEDDVEFNTG KMLSFAPGLD FGDLQLSQKE LSGLRHLNSG QQLSSFDATR NPEQSSNEAS GGGTGLNAPP FMVPANGAAG NGAPKPRVRA
301: RRGQATDPHS IAERLRREKI SDRMKNLQEL VPNSNRTDKA SMLDEIIEYV KFLQLQVKVL SMSRLGATEA VVPLLTQSQT ENSGGGLLLS PRSGSGRQQQ
401: ARGGSLPPPS SEVRDGAAFE QEVAQLMESD MTTAMQYLQS KGLCLMPVAL ASAISGQKGA SSAAVQPENG GAKEMLRAVK PLASPIHGR
001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
Arabidopsis Description
BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.