Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72281 | Soybean | nucleus, plastid | 17.97 | 56.8 |
| HORVU6Hr1G085500.3 | Barley | nucleus | 41.01 | 44.75 |
| CDY46133 | Canola | nucleus | 17.22 | 35.6 |
| GSMUA_Achr10P... | Banana | nucleus | 34.43 | 34.0 |
| HORVU5Hr1G106310.3 | Barley | nucleus | 26.33 | 33.33 |
| HORVU5Hr1G065450.20 | Barley | nucleus | 38.48 | 32.62 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 15.7 | 30.54 |
| CDY46132 | Canola | endoplasmic reticulum | 12.41 | 27.84 |
| HORVU2Hr1G104040.6 | Barley | nucleus | 12.15 | 25.53 |
| HORVU7Hr1G032420.3 | Barley | nucleus | 25.82 | 21.21 |
| HORVU5Hr1G102240.3 | Barley | nucleus | 16.96 | 16.92 |
| HORVU6Hr1G088020.4 | Barley | nucleus | 12.66 | 16.89 |
| HORVU5Hr1G011780.1 | Barley | nucleus | 14.18 | 16.42 |
| HORVU2Hr1G060680.1 | Barley | nucleus | 14.43 | 15.75 |
| HORVU7Hr1G026560.2 | Barley | nucleus | 13.16 | 15.38 |
| HORVU1Hr1G017900.1 | Barley | nucleus | 15.95 | 12.78 |
| HORVU5Hr1G093310.11 | Barley | nucleus | 17.47 | 12.61 |
| HORVU1Hr1G054260.3 | Barley | nucleus | 11.9 | 10.13 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G030250.5 | EnsemblPlantsGene:HORVU7Hr1G030250 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR16223 |
| PANTHER:PTHR16223:SF28 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000B488F27 | UniProt:A0A287VWS1 | MapMan:15.5.32 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:59304721..59307256
Molecular Weight (calculated)
42101.9 Da
IEP (calculated)
11.982
GRAVY (calculated)
-0.793
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGDGGGGG GAQDDFFDQM LSTLPSAWGD LGAGGKSPWE IAAGAEDLGA FDESALLASR LRQHQIGGEK PVMLQLTDLQ RQGLGEETGG TGFSPLPLFA
101: DRSPPQSREE MDGGFKSPNG TMQGGDHALF NGFGVHGGAA AVQPTFGQGG SMSGQSFGGG PAASGGTTAP ASSGGGAAPP RQTRVRARRG QATDPHSIAE
201: RVRRERIAER MKSLQELVPN ANKTDKASML DEIIDYVKFL QLQVKVLSMS RLGGAAGMAP LVASMSSEVG VLKQRRREQR GGRGGQGERR RRERGRWRGR
301: RAAGDGAAGG QDDGGGHGHG HAVPAGEGPL PHAHLPRLRH LLRHHHHHLP GLAPREAGRP PRLHRRRAGL RERRRRRRCQ ARQGRRRRRV RREAV
101: DRSPPQSREE MDGGFKSPNG TMQGGDHALF NGFGVHGGAA AVQPTFGQGG SMSGQSFGGG PAASGGTTAP ASSGGGAAPP RQTRVRARRG QATDPHSIAE
201: RVRRERIAER MKSLQELVPN ANKTDKASML DEIIDYVKFL QLQVKVLSMS RLGGAAGMAP LVASMSSEVG VLKQRRREQR GGRGGQGERR RRERGRWRGR
301: RAAGDGAAGG QDDGGGHGHG HAVPAGEGPL PHAHLPRLRH LLRHHHHHLP GLAPREAGRP PRLHRRRAGL RERRRRRRCQ ARQGRRRRRV RREAV
001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
Arabidopsis Description
BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.