Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06865 | Canola | nucleus | 59.56 | 75.49 |
| CDY35220 | Canola | nucleus | 61.1 | 74.93 |
| Bra011061.1-P | Field mustard | nucleus | 84.18 | 74.08 |
| CDY06867 | Canola | nucleus | 73.41 | 69.29 |
| CDY35224 | Canola | nucleus | 37.14 | 65.25 |
| AT4G28815.1 | Thale cress | vacuole | 37.58 | 55.7 |
| AT4G28800.2 | Thale cress | nucleus | 53.85 | 53.61 |
| CDY35222 | Canola | nucleus | 66.59 | 52.51 |
| AT4G28811.1 | Thale cress | nucleus | 56.48 | 47.24 |
| CDY37185 | Canola | mitochondrion | 9.89 | 45.92 |
| CDY31989 | Canola | nucleus | 42.2 | 40.34 |
| AT4G28790.1 | Thale cress | nucleus | 34.95 | 38.5 |
| CDY05725 | Canola | nucleus | 42.2 | 37.87 |
| Os04t0618600-01 | Rice | nucleus | 12.09 | 30.39 |
| CDY24734 | Canola | plastid | 9.45 | 30.28 |
| TraesCS2D01G461900.1 | Wheat | nucleus | 10.33 | 29.94 |
| EES11436 | Sorghum | nucleus | 11.43 | 27.66 |
| HORVU2Hr1G104040.6 | Barley | nucleus | 11.21 | 27.13 |
| CDY67566 | Canola | nucleus, plastid | 16.04 | 26.64 |
| CDY00603 | Canola | nucleus, plastid | 16.04 | 26.64 |
| Zm00001d002288_P002 | Maize | nucleus | 12.53 | 26.64 |
| Solyc04g007430.1.1 | Tomato | nucleus | 10.77 | 26.63 |
| CDY01438 | Canola | nucleus, plastid | 12.75 | 26.61 |
| TraesCS2A01G461700.2 | Wheat | nucleus | 10.99 | 26.6 |
| TraesCS2B01G483300.1 | Wheat | nucleus | 10.99 | 26.6 |
| TraesCS2D01G461700.3 | Wheat | nucleus | 10.99 | 26.6 |
| CDY12804 | Canola | nucleus, plastid | 12.53 | 26.39 |
| CDY65390 | Canola | nucleus | 11.65 | 25.36 |
| CDY30375 | Canola | nucleus | 22.2 | 24.88 |
| CDY14866 | Canola | nucleus | 21.98 | 24.81 |
| CDX83509 | Canola | nucleus | 22.42 | 24.7 |
| CDX70453 | Canola | nucleus | 21.98 | 24.57 |
| CDY29961 | Canola | nucleus | 21.98 | 24.57 |
| CDY42809 | Canola | nucleus | 21.98 | 24.15 |
| PGSC0003DMT400015377 | Potato | nucleus | 10.55 | 23.65 |
| CDX91917 | Canola | nucleus | 18.02 | 23.63 |
| CDX83214 | Canola | nucleus | 17.8 | 23.28 |
| Zm00001d026317_P003 | Maize | nucleus, plastid | 12.09 | 23.21 |
| CDY06026 | Canola | nucleus | 21.98 | 22.62 |
| CDX71916 | Canola | nucleus | 21.98 | 22.57 |
| CDY20289 | Canola | nucleus | 10.11 | 21.8 |
| CDX74328 | Canola | nucleus | 18.24 | 21.45 |
| CDX75629 | Canola | nucleus | 16.04 | 21.1 |
| CDY21498 | Canola | nucleus | 17.8 | 20.93 |
| CDY22448 | Canola | nucleus, plastid | 16.04 | 20.74 |
| CDX69281 | Canola | nucleus, plastid | 15.82 | 20.63 |
| CDY44048 | Canola | nucleus, plastid | 15.38 | 20.53 |
| CDX94963 | Canola | nucleus | 21.76 | 19.88 |
| CDX67873 | Canola | nucleus | 13.41 | 19.87 |
| CDY22636 | Canola | nucleus | 21.32 | 19.76 |
| CDY50911 | Canola | nucleus | 11.65 | 19.56 |
| CDY06358 | Canola | nucleus | 21.1 | 19.55 |
| CDY64745 | Canola | nucleus | 21.54 | 19.52 |
| CDY65446 | Canola | nucleus | 13.85 | 19.03 |
| CDX83349 | Canola | nucleus | 16.48 | 18.56 |
| CDX80064 | Canola | nucleus | 16.26 | 18.5 |
| CDY66254 | Canola | nucleus | 16.26 | 18.5 |
| CDY11836 | Canola | nucleus | 11.43 | 18.18 |
| CDY55014 | Canola | nucleus | 11.43 | 17.99 |
| CDY28232 | Canola | nucleus | 12.53 | 17.43 |
| CDY46133 | Canola | nucleus | 7.25 | 17.28 |
| CDY02785 | Canola | nucleus | 11.21 | 17.23 |
| CDY32733 | Canola | nucleus | 11.43 | 17.22 |
| CDY34780 | Canola | nucleus | 12.75 | 17.16 |
| CDX68710 | Canola | nucleus | 12.31 | 17.13 |
| CDX88653 | Canola | nucleus | 11.21 | 17.0 |
| CDY62262 | Canola | nucleus | 11.21 | 16.89 |
| CDX76819 | Canola | nucleus | 12.53 | 16.76 |
| CDX76616 | Canola | extracellular | 12.75 | 16.2 |
| CDY11401 | Canola | extracellular | 12.31 | 15.91 |
| CDX91293 | Canola | nucleus | 10.33 | 15.77 |
| CDY18011 | Canola | nucleus | 10.33 | 15.46 |
| CDX97278 | Canola | nucleus | 10.11 | 15.38 |
| CDY18143 | Canola | nucleus | 10.33 | 15.36 |
| CDX89919 | Canola | nucleus | 10.33 | 15.11 |
| CDY21898 | Canola | nucleus | 9.89 | 14.95 |
| CDX90930 | Canola | nucleus | 10.11 | 14.84 |
| CDY22062 | Canola | nucleus | 9.89 | 14.8 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 6.37 | 14.29 |
| CDY46132 | Canola | endoplasmic reticulum | 4.18 | 10.8 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.1.4 | Gene3D:4.10.280.10 | GO:A0A078EXP7 | EnsemblPlants:CDY06870 | ProteinID:CDY06870 |
| ProteinID:CDY06870.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00123148001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF145 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE9075 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaC01g09690D
Coordinates
chrLK031973:-:916439..918787
Molecular Weight (calculated)
50149.1 Da
IEP (calculated)
5.508
GRAVY (calculated)
-0.719
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFWATLRGG EDDIVELLWK SGQVVESSQE QRPPVPPSIL RGSGSGGGEE SAPLPSPPPL PSHQQQLSDD QNLFIGEDEM ASWLLHHHPL REEGDFHSHL
101: FYSGVASASL TPPPPPAAGS AIYTPTAAER PMGQAIASRR AESFFNFWRL RENIHTGGRV EAAAAPWVPV VKDSTQVGSS ATPSSSAATA TSGVLQTFAV
201: PSLGQRGVDT VCDIPRPSSS VVSKTETELF RIETEAGDDE RKRKEREEPS DDEEETGEEA RGSTSRKRSR AAEMHNISER RRREKINEKL KALQELIPRC
301: NKTDKASMLE DAIEYVKSLQ MQIQMMSMRG GGMMPMMYTP NMQRFMPSSA MGMMGMNRPP FIPFPGMALP RPAHMEGLGP PYPPPRYPFP NVQAFDPNQP
401: QFPGYMNPYS QFVGLQQMQQ PPPPTQLQNQ SSSQLSFSQA SSSKEPEDQD NKPKG
101: FYSGVASASL TPPPPPAAGS AIYTPTAAER PMGQAIASRR AESFFNFWRL RENIHTGGRV EAAAAPWVPV VKDSTQVGSS ATPSSSAATA TSGVLQTFAV
201: PSLGQRGVDT VCDIPRPSSS VVSKTETELF RIETEAGDDE RKRKEREEPS DDEEETGEEA RGSTSRKRSR AAEMHNISER RRREKINEKL KALQELIPRC
301: NKTDKASMLE DAIEYVKSLQ MQIQMMSMRG GGMMPMMYTP NMQRFMPSSA MGMMGMNRPP FIPFPGMALP RPAHMEGLGP PYPPPRYPFP NVQAFDPNQP
401: QFPGYMNPYS QFVGLQQMQQ PPPPTQLQNQ SSSQLSFSQA SSSKEPEDQD NKPKG
001: MGEDDIVELL WNGQVVRTSQ PQRPSSGKPS PTPPILRGSG SGSGEENAPL PLPLLQPPRP LHHQNLFIRE EEMSSWLHYS YTGVTSTPAT HPQSSVSLPP
101: PPPIAPSEDD VVELLWKSGQ VVQSIQTQRP IPPPIFRGSG SGGGEETVLP LPPLHPSHQN IFIQEDEMAS WLYHPLRQDY FSSGVASTSA TRPQSSASLA
201: PTPPPPSVPY GQIPVERRTE NFMNFLRLRG NIFSGGRVEA GPVVIESTQI GSSATPSSSA AESCVIPATH GTESRAAAIT GVSRTFAVPG LGRRGKEVAT
301: ETAGTSYSGV NKAETERVQI QPERETKITE DKKREETIAE IQGTEEAHGS TSRKRSRAAD MHNLSERRRR ERINERMKTL QELLPRCRKT DKVSMLEDVI
401: EYVKSLQLQI QMMSMGHGMM PPMMHEGNTQ QFMPHMAMGM KGMNRPPPFV PFPGKTFPRP GHMAGVGPSY PALRYPFPDT QASDLSRVHV PSLHSNPVPN
501: QPRFPAYINP YSQFVGLHQM QQPPLPLQGQ PTSQPSFSHA STSK
101: PPPIAPSEDD VVELLWKSGQ VVQSIQTQRP IPPPIFRGSG SGGGEETVLP LPPLHPSHQN IFIQEDEMAS WLYHPLRQDY FSSGVASTSA TRPQSSASLA
201: PTPPPPSVPY GQIPVERRTE NFMNFLRLRG NIFSGGRVEA GPVVIESTQI GSSATPSSSA AESCVIPATH GTESRAAAIT GVSRTFAVPG LGRRGKEVAT
301: ETAGTSYSGV NKAETERVQI QPERETKITE DKKREETIAE IQGTEEAHGS TSRKRSRAAD MHNLSERRRR ERINERMKTL QELLPRCRKT DKVSMLEDVI
401: EYVKSLQLQI QMMSMGHGMM PPMMHEGNTQ QFMPHMAMGM KGMNRPPPFV PFPGKTFPRP GHMAGVGPSY PALRYPFPDT QASDLSRVHV PSLHSNPVPN
501: QPRFPAYINP YSQFVGLHQM QQPPLPLQGQ PTSQPSFSHA STSK
Arabidopsis Description
BHLH119Transcription factor bHLH119 [Source:UniProtKB/Swiss-Prot;Acc:Q8GT73]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.