Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G00050.1 | CDY22597 | AT1G32230.1 | 19548978 |
| AT4G00050.1 | CDY41739 | AT1G32230.1 | 19548978 |
| AT4G00050.1 | CDY43007 | AT1G32230.1 | 19548978 |
| AT4G00050.1 | CDY60257 | AT1G32230.1 | 19548978 |
| AT4G00050.1 | CDY67026 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037312.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX83214 | Canola | nucleus | 77.99 | 46.84 |
| CDX91917 | Canola | nucleus | 76.08 | 45.82 |
| CDX74328 | Canola | nucleus | 79.43 | 42.89 |
| CDY21498 | Canola | nucleus | 77.99 | 42.12 |
| AT4G00050.1 | Thale cress | nucleus | 78.47 | 41.1 |
| CDY37185 | Canola | mitochondrion | 19.14 | 40.82 |
| CDY24734 | Canola | plastid | 16.75 | 24.65 |
| PGSC0003DMT400066807 | Potato | nucleus | 53.59 | 24.14 |
| KRG88937 | Soybean | nucleus | 53.11 | 23.87 |
| KRH75301 | Soybean | nucleus | 52.15 | 23.8 |
| VIT_15s0021g02690.t01 | Wine grape | nucleus | 52.63 | 23.66 |
| Solyc10g018510.1.1 | Tomato | nucleus | 43.06 | 23.02 |
| HORVU1Hr1G054260.3 | Barley | nucleus | 43.54 | 19.61 |
| TraesCS1B01G226200.2 | Wheat | nucleus | 42.58 | 19.56 |
| TraesCS1D01G215600.2 | Wheat | nucleus | 41.63 | 19.12 |
| CDY12804 | Canola | nucleus, plastid | 19.62 | 18.98 |
| Os10t0556200-01 | Rice | nucleus | 42.11 | 18.92 |
| TraesCS1A01G212700.1 | Wheat | nucleus | 41.15 | 18.9 |
| CDY01438 | Canola | nucleus, plastid | 19.62 | 18.81 |
| Zm00001d029898_P001 | Maize | nucleus | 43.06 | 18.37 |
| CDY35224 | Canola | nucleus | 22.49 | 18.15 |
| OQU92150 | Sorghum | nucleus | 44.02 | 17.13 |
| CDY67566 | Canola | nucleus, plastid | 20.57 | 15.69 |
| CDY00603 | Canola | nucleus, plastid | 20.57 | 15.69 |
| CDY11836 | Canola | nucleus | 21.05 | 15.38 |
| CDY55014 | Canola | nucleus | 21.05 | 15.22 |
| CDY44048 | Canola | nucleus, plastid | 24.4 | 14.96 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 14.35 | 14.78 |
| CDX75629 | Canola | nucleus | 24.4 | 14.74 |
| CDY20289 | Canola | nucleus | 14.83 | 14.69 |
| CDY62262 | Canola | nucleus | 21.05 | 14.57 |
| CDY02785 | Canola | nucleus | 20.57 | 14.53 |
| CDY22448 | Canola | nucleus, plastid | 24.4 | 14.49 |
| CDX88653 | Canola | nucleus | 20.57 | 14.33 |
| CDY32733 | Canola | nucleus | 20.57 | 14.24 |
| CDX69281 | Canola | nucleus, plastid | 22.97 | 13.75 |
| CDX67873 | Canola | nucleus | 19.14 | 13.03 |
| CDY28232 | Canola | nucleus | 20.1 | 12.84 |
| CDX68710 | Canola | nucleus | 19.62 | 12.54 |
| CDY46132 | Canola | endoplasmic reticulum | 10.53 | 12.5 |
| CDY65446 | Canola | nucleus | 19.62 | 12.39 |
| CDX76616 | Canola | extracellular | 21.05 | 12.29 |
| CDY06865 | Canola | nucleus | 21.05 | 12.26 |
| CDY11401 | Canola | extracellular | 20.57 | 12.22 |
| CDY14866 | Canola | nucleus | 22.97 | 11.91 |
| CDY34780 | Canola | nucleus | 19.14 | 11.83 |
| CDX70453 | Canola | nucleus | 22.97 | 11.79 |
| CDY29961 | Canola | nucleus | 22.97 | 11.79 |
| CDX76819 | Canola | nucleus | 19.14 | 11.76 |
| CDX80064 | Canola | nucleus | 22.49 | 11.75 |
| CDY06870 | Canola | nucleus | 25.36 | 11.65 |
| CDY66254 | Canola | nucleus | 22.01 | 11.5 |
| CDY50911 | Canola | nucleus | 14.83 | 11.44 |
| CDX91293 | Canola | nucleus | 16.27 | 11.41 |
| CDX83349 | Canola | nucleus | 22.01 | 11.39 |
| CDY30375 | Canola | nucleus | 22.01 | 11.33 |
| CDY21898 | Canola | nucleus | 16.27 | 11.3 |
| CDY22062 | Canola | nucleus | 16.27 | 11.18 |
| CDY18011 | Canola | nucleus | 16.27 | 11.18 |
| CDY31989 | Canola | nucleus | 25.36 | 11.13 |
| CDY18143 | Canola | nucleus | 16.27 | 11.11 |
| CDY05725 | Canola | nucleus | 26.79 | 11.05 |
| CDX90930 | Canola | nucleus | 16.27 | 10.97 |
| CDX89919 | Canola | nucleus | 16.27 | 10.93 |
| CDX83509 | Canola | nucleus | 21.53 | 10.9 |
| CDY06026 | Canola | nucleus | 22.49 | 10.63 |
| CDX71916 | Canola | nucleus | 22.49 | 10.61 |
| CDY06867 | Canola | nucleus | 23.92 | 10.37 |
| CDX97278 | Canola | nucleus | 14.83 | 10.37 |
| CDX94963 | Canola | nucleus | 24.4 | 10.24 |
| CDY22636 | Canola | nucleus | 23.92 | 10.18 |
| CDY42809 | Canola | nucleus | 20.1 | 10.14 |
| CDY06358 | Canola | nucleus | 23.45 | 9.98 |
| CDY64745 | Canola | nucleus | 23.92 | 9.96 |
| CDY35220 | Canola | nucleus | 14.35 | 8.09 |
| CDY46133 | Canola | nucleus | 7.18 | 7.85 |
| CDY35222 | Canola | nucleus | 21.53 | 7.8 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078JFZ5 | UniProt:A0A078JFZ5 | EnsemblPlants:CDY65390 | ProteinID:CDY65390 |
| ProteinID:CDY65390.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00045731001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF173 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002541B17 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng20430DBnaAnng20430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFZ5]
Coordinates
chrLK034764:-:2364..3811
Molecular Weight (calculated)
23237.3 Da
IEP (calculated)
9.554
GRAVY (calculated)
-0.544
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEEEKQAG GKSPVPTKRS RAAAIHNQTE RKRRDKINQR MKTLQKLVPN SSKTDKASML DEVIEYLKQL QAQVSMMCRM NLPSMMLPMA MQQQQQQLQL
101: SLMSSSMGLG LGMGMPALGL LDLNSMNRAA ATAPNIHANM MPNPFVPMTS PPWDASSSTD TLFQSPLTHD TMPAFLSCSS QQTTMEAYSR MAALYQQMQQ
201: QIPPPSSPK
101: SLMSSSMGLG LGMGMPALGL LDLNSMNRAA ATAPNIHANM MPNPFVPMTS PPWDASSSTD TLFQSPLTHD TMPAFLSCSS QQTTMEAYSR MAALYQQMQQ
201: QIPPPSSPK
001: MAMDALVPCS NLVHEQQSKP GGVGSTRVGS CSDGRTMGGG KRARVAPEWS GGGSQRLTMD TYDVGFTSTS MGSHDNTIDD HDSVCHSRPQ MEDEEEKKAG
101: GKSSVSTKRS RAAAIHNQSE RKRRDKINQR MKTLQKLVPN SSKTDKASML DEVIEYLKQL QAQVSMMSRM NMPSMMLPMA MQQQQQLQMS LMSNPMGLGM
201: GMGMPGLGLL DLNSMNRAAA SAPNIHANMM PNPFLPMNCP SWDASSNDSR FQSPLIPDPM SAFLACSTQP TTMEAYSRMA TLYQQMQQQL PPPSNPK
101: GKSSVSTKRS RAAAIHNQSE RKRRDKINQR MKTLQKLVPN SSKTDKASML DEVIEYLKQL QAQVSMMSRM NMPSMMLPMA MQQQQQLQMS LMSNPMGLGM
201: GMGMPGLGLL DLNSMNRAAA SAPNIHANMM PNPFLPMNCP SWDASSNDSR FQSPLIPDPM SAFLACSTQP TTMEAYSRMA TLYQQMQQQL PPPSNPK
Arabidopsis Description
UNE10Transcription factor UNE10 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ38]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.