Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020017.1-P | Field mustard | nucleus | 96.22 | 97.77 |
| CDX94963 | Canola | nucleus | 92.43 | 93.17 |
| CDY22636 | Canola | nucleus | 79.48 | 81.26 |
| CDY06358 | Canola | nucleus | 78.88 | 80.65 |
| AT1G09530.3 | Thale cress | nucleus | 82.27 | 78.82 |
| CDY37185 | Canola | mitochondrion | 9.76 | 50.0 |
| VIT_07s0005g02510.t01 | Wine grape | nucleus | 13.74 | 34.5 |
| CDY24734 | Canola | plastid | 8.76 | 30.99 |
| KRG96663 | Soybean | nucleus | 36.26 | 28.75 |
| CDY01438 | Canola | nucleus, plastid | 12.15 | 27.98 |
| KRH68390 | Soybean | nucleus | 34.66 | 27.88 |
| CDY12804 | Canola | nucleus, plastid | 11.95 | 27.78 |
| CDY67566 | Canola | nucleus, plastid | 14.94 | 27.37 |
| CDY00603 | Canola | nucleus, plastid | 14.94 | 27.37 |
| PGSC0003DMT400047079 | Potato | nucleus | 37.65 | 26.69 |
| Solyc01g102300.2.1 | Tomato | nucleus | 36.45 | 25.59 |
| CDY35224 | Canola | nucleus | 12.95 | 25.1 |
| Zm00001d024783_P001 | Maize | nucleus | 24.3 | 24.16 |
| CDY65390 | Canola | nucleus | 9.96 | 23.92 |
| Os05t0139100-01 | Rice | nucleus | 23.71 | 23.56 |
| Zm00001d040536_P005 | Maize | nucleus | 26.49 | 23.46 |
| HORVU1Hr1G017900.1 | Barley | nucleus | 22.91 | 23.33 |
| KXG32305 | Sorghum | nucleus | 27.89 | 23.18 |
| TraesCS1A01G083000.1 | Wheat | nucleus | 23.31 | 23.08 |
| CDX91917 | Canola | nucleus | 15.94 | 23.05 |
| TraesCS1D01G084200.1 | Wheat | nucleus | 22.91 | 22.91 |
| TraesCS1B01G100400.2 | Wheat | nucleus | 22.91 | 22.91 |
| CDY31989 | Canola | nucleus | 21.71 | 22.9 |
| CDY05725 | Canola | nucleus | 23.11 | 22.88 |
| GSMUA_Achr1P19000_001 | Banana | mitochondrion, nucleus | 26.89 | 22.77 |
| CDX83509 | Canola | nucleus | 18.73 | 22.76 |
| CDX83214 | Canola | nucleus | 15.74 | 22.7 |
| CDX80064 | Canola | nucleus | 17.93 | 22.5 |
| CDY14866 | Canola | nucleus | 17.93 | 22.33 |
| CDY20289 | Canola | nucleus | 9.36 | 22.27 |
| CDY66254 | Canola | nucleus | 17.73 | 22.25 |
| CDY30375 | Canola | nucleus | 17.73 | 21.92 |
| CDX70453 | Canola | nucleus | 17.73 | 21.87 |
| CDY29961 | Canola | nucleus | 17.73 | 21.87 |
| CDY35220 | Canola | nucleus | 16.14 | 21.83 |
| CDX67873 | Canola | nucleus | 13.35 | 21.82 |
| CDY06870 | Canola | nucleus | 19.52 | 21.54 |
| Os01t0286100-01 | Rice | nucleus | 27.29 | 21.51 |
| CDY42809 | Canola | nucleus | 17.73 | 21.5 |
| CDX74328 | Canola | nucleus | 16.33 | 21.19 |
| CDY65446 | Canola | nucleus | 13.94 | 21.15 |
| CDY44048 | Canola | nucleus, plastid | 14.34 | 21.11 |
| Zm00001d008205_P001 | Maize | nucleus | 26.69 | 21.0 |
| CDY06026 | Canola | nucleus | 18.33 | 20.81 |
| CDX71916 | Canola | nucleus | 18.33 | 20.77 |
| CDY22448 | Canola | nucleus, plastid | 14.54 | 20.74 |
| CDX75629 | Canola | nucleus | 14.14 | 20.52 |
| CDY21498 | Canola | nucleus | 15.74 | 20.41 |
| CDX69281 | Canola | nucleus, plastid | 14.14 | 20.34 |
| CDX83349 | Canola | nucleus | 16.33 | 20.3 |
| CDY06865 | Canola | nucleus | 14.14 | 19.78 |
| CDY50911 | Canola | nucleus | 10.36 | 19.19 |
| KXG21255 | Sorghum | nucleus | 25.3 | 18.46 |
| CDY28232 | Canola | nucleus | 11.95 | 18.35 |
| CDX68710 | Canola | nucleus | 11.95 | 18.35 |
| CDY06867 | Canola | nucleus | 17.33 | 18.05 |
| CDY55014 | Canola | nucleus | 10.36 | 17.99 |
| CDY11836 | Canola | nucleus | 10.16 | 17.83 |
| CDY02785 | Canola | nucleus | 10.36 | 17.57 |
| CDX76616 | Canola | extracellular | 12.35 | 17.32 |
| CDY62262 | Canola | nucleus | 10.36 | 17.22 |
| CDY32733 | Canola | nucleus | 10.36 | 17.22 |
| CDY11401 | Canola | extracellular | 11.95 | 17.05 |
| CDX88653 | Canola | nucleus | 10.16 | 17.0 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 6.77 | 16.75 |
| CDY46133 | Canola | nucleus | 6.18 | 16.23 |
| CDY34780 | Canola | nucleus | 10.56 | 15.68 |
| CDX76819 | Canola | nucleus | 10.56 | 15.59 |
| CDY21898 | Canola | nucleus | 9.16 | 15.28 |
| CDY22062 | Canola | nucleus | 9.16 | 15.13 |
| CDY18011 | Canola | nucleus | 8.96 | 14.8 |
| CDX91293 | Canola | nucleus | 8.76 | 14.77 |
| CDY35222 | Canola | nucleus | 16.93 | 14.73 |
| CDX97278 | Canola | nucleus | 8.76 | 14.72 |
| CDX90930 | Canola | nucleus | 8.96 | 14.52 |
| CDY18143 | Canola | nucleus | 8.76 | 14.38 |
| CDX89919 | Canola | nucleus | 8.76 | 14.15 |
| CDY46132 | Canola | endoplasmic reticulum | 4.78 | 13.64 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.1.4 | Gene3D:4.10.280.10 | GO:A0A078JE62 | UniProt:A0A078JE62 | EnsemblPlants:CDY64745 |
| ProteinID:CDY64745 | ProteinID:CDY64745.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00042664001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF284 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE5C03 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g37850DBnaA06g37850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JE62]
Coordinates
chrLK034541:-:2046..5187
Molecular Weight (calculated)
54881.2 Da
IEP (calculated)
6.036
GRAVY (calculated)
-0.724
Length
502 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLFELFRLA NANVEYAQDE NTSPTVDEVI ELVWENGQIS TQSQSSRSRN IPPPQSIHQA RAREIGTGSK ATMVDEIPMS VPSLMTGLSQ DDDLVPWLNP
101: HQSLDGYCSD LLHDVSPVTV NEQESDAFPR RNNGNESAPA ASSSQFNGFD SHSLYGTGRA RDPVSQPAKP DQFTQRQEPL VTSNKPGLLN FSHFLRTAAL
201: AKTNNVSKEK SPQSPPNVFQ TRVLGAKDKV LNEPKDNNQK VCLVSEDSNR KEQESEKAVV CSSVGSGNSL DGPSESPLKR KHLDVQDIEC HSEDVEGESG
301: DGRKEAAPSR TGMGSKRSRS AEVHNLSERR RRDRINEKMR ALQELIPNCN KVDKASMLDE AIEYLKSLQL QVQFMSMASG YYMPPVMFPP GMGHHYQAAA
401: MAMGMGMPYA MGLPDMSRGG PSVNNGPQFQ VPGMQQPVAM AIPRVSAGGF FGSSTVEMNK SDDGSTRDLS GGTKDQTTTK DNNSLRPIKR KQASSDQFCG
501: SL
101: HQSLDGYCSD LLHDVSPVTV NEQESDAFPR RNNGNESAPA ASSSQFNGFD SHSLYGTGRA RDPVSQPAKP DQFTQRQEPL VTSNKPGLLN FSHFLRTAAL
201: AKTNNVSKEK SPQSPPNVFQ TRVLGAKDKV LNEPKDNNQK VCLVSEDSNR KEQESEKAVV CSSVGSGNSL DGPSESPLKR KHLDVQDIEC HSEDVEGESG
301: DGRKEAAPSR TGMGSKRSRS AEVHNLSERR RRDRINEKMR ALQELIPNCN KVDKASMLDE AIEYLKSLQL QVQFMSMASG YYMPPVMFPP GMGHHYQAAA
401: MAMGMGMPYA MGLPDMSRGG PSVNNGPQFQ VPGMQQPVAM AIPRVSAGGF FGSSTVEMNK SDDGSTRDLS GGTKDQTTTK DNNSLRPIKR KQASSDQFCG
501: SL
001: MPLFELFRLT KAKLESAQDR NPSPPVDEVV ELVWENGQIS TQSQSSRSRN IPPPQANSSR AREIGNGSKT TMVDEIPMSV PSLMTGLSQD DDFVPWLNHH
101: PSLDGYCSDF LRDVSSPVTV NEQESDMAVN QTAFPLFQRR KDGNESAPAA SSSQYNGFQS HSLYGSDRAR DLPSQQTNPD RFTQTQEPLI TSNKPSLVNF
201: SHFLRPATFA KTTNNNLHDT KEKSPQSPPN VFQTRVLGAK DSEDKVLNES VASATPKDNQ KACLISEDSC RKDQESEKAV VCSSVGSGNS LDGPSESPSL
301: SLKRKHSNIQ DIDCHSEDVE EESGDGRKEA GPSRTGLGSK RSRSAEVHNL SERRRRDRIN EKMRALQELI PNCNKVDKAS MLDEAIEYLK SLQLQVQIMS
401: MASGYYLPPA VMFPPGMGHY PAAAAAMAMG MGMPYAMGLP DLSRGGSSVN HGPQFQVSGM QQQPVAMGIP RVSGGGIFAG SSTIGNGSTR DLSGSKDQTT
501: TNNNSNLKPI KRKQGSSDQF CGSS
101: PSLDGYCSDF LRDVSSPVTV NEQESDMAVN QTAFPLFQRR KDGNESAPAA SSSQYNGFQS HSLYGSDRAR DLPSQQTNPD RFTQTQEPLI TSNKPSLVNF
201: SHFLRPATFA KTTNNNLHDT KEKSPQSPPN VFQTRVLGAK DSEDKVLNES VASATPKDNQ KACLISEDSC RKDQESEKAV VCSSVGSGNS LDGPSESPSL
301: SLKRKHSNIQ DIDCHSEDVE EESGDGRKEA GPSRTGLGSK RSRSAEVHNL SERRRRDRIN EKMRALQELI PNCNKVDKAS MLDEAIEYLK SLQLQVQIMS
401: MASGYYLPPA VMFPPGMGHY PAAAAAMAMG MGMPYAMGLP DLSRGGSSVN HGPQFQVSGM QQQPVAMGIP RVSGGGIFAG SSTIGNGSTR DLSGSKDQTT
501: TNNNSNLKPI KRKQGSSDQF CGSS
Arabidopsis Description
PIF3Transcription factor PIF3 [Source:UniProtKB/Swiss-Prot;Acc:O80536]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.