Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06870 | Canola | nucleus | 74.93 | 61.1 |
| CDY06867 | Canola | nucleus | 65.5 | 50.41 |
| CDY06865 | Canola | nucleus | 45.82 | 47.35 |
| CDY35222 | Canola | nucleus | 70.89 | 45.58 |
| CDY37185 | Canola | mitochondrion | 11.05 | 41.84 |
| AT4G28815.1 | Thale cress | vacuole | 32.61 | 39.41 |
| AT4G28800.2 | Thale cress | nucleus | 46.36 | 37.64 |
| AT4G28811.1 | Thale cress | nucleus | 52.29 | 35.66 |
| AT4G28790.1 | Thale cress | nucleus | 38.54 | 34.62 |
| CDY24734 | Canola | plastid | 12.13 | 31.69 |
| CDY35224 | Canola | nucleus | 21.83 | 31.27 |
| CDY31989 | Canola | nucleus | 38.01 | 29.62 |
| CDY05725 | Canola | nucleus | 37.74 | 27.61 |
| TraesCS2D01G461900.1 | Wheat | nucleus | 10.78 | 25.48 |
| CDY12804 | Canola | nucleus, plastid | 14.56 | 25.0 |
| CDY01438 | Canola | nucleus, plastid | 14.56 | 24.77 |
| CDY20289 | Canola | nucleus | 14.02 | 24.64 |
| Os04t0618600-01 | Rice | nucleus | 11.86 | 24.31 |
| EES11436 | Sorghum | nucleus | 11.59 | 22.87 |
| Zm00001d002288_P002 | Maize | nucleus | 12.94 | 22.43 |
| TraesCS2D01G461700.3 | Wheat | nucleus | 11.05 | 21.81 |
| TraesCS2B01G483300.1 | Wheat | nucleus | 11.05 | 21.81 |
| TraesCS2A01G461700.2 | Wheat | nucleus | 11.05 | 21.81 |
| HORVU2Hr1G104040.6 | Barley | nucleus | 11.05 | 21.81 |
| CDY30375 | Canola | nucleus | 22.91 | 20.94 |
| CDY14866 | Canola | nucleus | 22.64 | 20.84 |
| CDX83509 | Canola | nucleus | 23.18 | 20.82 |
| CDX70453 | Canola | nucleus | 22.64 | 20.64 |
| CDY29961 | Canola | nucleus | 22.64 | 20.64 |
| CDY42809 | Canola | nucleus | 22.91 | 20.53 |
| CDY67566 | Canola | nucleus, plastid | 14.29 | 19.34 |
| CDY00603 | Canola | nucleus, plastid | 14.29 | 19.34 |
| CDY46133 | Canola | nucleus | 9.7 | 18.85 |
| Zm00001d026317_P003 | Maize | nucleus, plastid | 11.86 | 18.57 |
| Solyc04g007430.1.1 | Tomato | nucleus | 9.16 | 18.48 |
| CDY06026 | Canola | nucleus | 21.56 | 18.1 |
| CDX71916 | Canola | nucleus | 21.56 | 18.06 |
| CDX94963 | Canola | nucleus | 22.91 | 17.07 |
| CDX75629 | Canola | nucleus | 15.9 | 17.05 |
| CDY22448 | Canola | nucleus, plastid | 16.17 | 17.05 |
| CDY44048 | Canola | nucleus, plastid | 15.63 | 17.01 |
| CDX69281 | Canola | nucleus, plastid | 15.9 | 16.91 |
| CDY22636 | Canola | nucleus | 22.1 | 16.7 |
| CDY06358 | Canola | nucleus | 21.83 | 16.5 |
| PGSC0003DMT400015377 | Potato | nucleus | 8.89 | 16.26 |
| CDX91917 | Canola | nucleus | 15.09 | 16.14 |
| CDY64745 | Canola | nucleus | 21.83 | 16.14 |
| CDY11836 | Canola | nucleus | 12.4 | 16.08 |
| CDY55014 | Canola | nucleus | 12.4 | 15.92 |
| CDX83214 | Canola | nucleus | 14.56 | 15.52 |
| CDX88653 | Canola | nucleus | 12.4 | 15.33 |
| CDY28232 | Canola | nucleus | 13.48 | 15.29 |
| CDY32733 | Canola | nucleus | 12.4 | 15.23 |
| CDY62262 | Canola | nucleus | 12.4 | 15.23 |
| CDY02785 | Canola | nucleus | 12.13 | 15.2 |
| CDX68710 | Canola | nucleus | 13.21 | 14.98 |
| CDY34780 | Canola | nucleus | 13.48 | 14.79 |
| CDX74328 | Canola | nucleus | 15.36 | 14.73 |
| CDX76819 | Canola | nucleus | 13.21 | 14.41 |
| CDY50911 | Canola | nucleus | 10.51 | 14.39 |
| CDY65390 | Canola | nucleus | 8.09 | 14.35 |
| CDX83349 | Canola | nucleus | 15.36 | 14.11 |
| CDY21498 | Canola | nucleus | 14.56 | 13.95 |
| CDX91293 | Canola | nucleus | 11.05 | 13.76 |
| CDX80064 | Canola | nucleus | 14.82 | 13.75 |
| CDY66254 | Canola | nucleus | 14.82 | 13.75 |
| CDX97278 | Canola | nucleus | 11.05 | 13.71 |
| CDX67873 | Canola | nucleus | 11.32 | 13.68 |
| CDY18011 | Canola | nucleus | 11.05 | 13.49 |
| CDY18143 | Canola | nucleus | 11.05 | 13.4 |
| CDY65446 | Canola | nucleus | 11.86 | 13.29 |
| CDX90930 | Canola | nucleus | 11.05 | 13.23 |
| CDX89919 | Canola | nucleus | 11.05 | 13.18 |
| CDY21898 | Canola | nucleus | 10.51 | 12.96 |
| CDY22062 | Canola | nucleus | 10.51 | 12.83 |
| CDY11401 | Canola | extracellular | 10.51 | 11.08 |
| CDX76616 | Canola | extracellular | 10.51 | 10.89 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 5.12 | 9.36 |
| CDY46132 | Canola | endoplasmic reticulum | 2.7 | 5.68 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078H9U4 | UniProt:A0A078H9U4 | EnsemblPlants:CDY35220 | ProteinID:CDY35220 |
| ProteinID:CDY35220.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00058131001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF145 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEAD08 | InterPro:bHLH_dom | SEG:seg |
Description
BnaA01g08110DBnaA01g08110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9U4]
Coordinates
chrLK032348:+:210525..214410
Molecular Weight (calculated)
41334.5 Da
IEP (calculated)
6.863
GRAVY (calculated)
-0.751
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MKETKEKRQK GLRVEGRRHC ECRKRHSTHR DTHFRGREER EREGILFVNQ GEDDIVELLW KSGQVVESSQ AQRPPVPPPI LRGSGSGGGE GNAQLPQPPP
101: LQQRSDDQNL FIGEDEMASW LLHHPLREED DFHSHLFYSG VVSAVPSTQP QASVSLTPPQ PPTAAERPIG QVMAERRAES FFNFWRLRGN IHTGGRVEAA
201: AAPWVPVVKD SKQVGSSATP SSSAATATSG VLQAFAVPRL GQSGVDTVCE IAGPSSSVVS KTETELFRIE TEAGDDERKR KEREEPADDT EETGEEARGS
301: TSRKRSRAAE MHSISERRRR EKINEKLKAL QELIPRCNKT DKASMLEDAI EYVKSLQLQI QAFVFLFLSV V
101: LQQRSDDQNL FIGEDEMASW LLHHPLREED DFHSHLFYSG VVSAVPSTQP QASVSLTPPQ PPTAAERPIG QVMAERRAES FFNFWRLRGN IHTGGRVEAA
201: AAPWVPVVKD SKQVGSSATP SSSAATATSG VLQAFAVPRL GQSGVDTVCE IAGPSSSVVS KTETELFRIE TEAGDDERKR KEREEPADDT EETGEEARGS
301: TSRKRSRAAE MHSISERRRR EKINEKLKAL QELIPRCNKT DKASMLEDAI EYVKSLQLQI QAFVFLFLSV V
001: MTWKPKMLIL SHDLISPEKY IMGEDDIVEL LGKSSQVVTS SQTQTPSCDP PLILRGSGSG DGEGNGPLPQ PPPPLYHQQS LFIQEDEMAS WLHQPNRQDY
101: LYSQLLYSGV ASTHPQSLAS LEPPPPPRAQ YILAADRPTG HILAERRAEN FMNISRQRGN IFLGGVEAVP SNSTLLSSAT ESIPATHGTE SRATVTGGVS
201: RTFAVPGLGP RGKAVAIETA GTQSWGLCKA ETEPVQRQPA TETDITDERK RKTREETNVE NQGTEEARDS TSSKRSRAAI MHKLSERRRR QKINEMMKAL
301: QELLPRCTKT DRSSMLDDVI EYVKSLQSQI QMFSMGHVMI PPMMYAGNIQ QQYMPHMAMG MNRPPAFIPF PRQAHMAEGV GPVDLFRENE ETEQETMSLL
401: LREDKRTKQK MFS
101: LYSQLLYSGV ASTHPQSLAS LEPPPPPRAQ YILAADRPTG HILAERRAEN FMNISRQRGN IFLGGVEAVP SNSTLLSSAT ESIPATHGTE SRATVTGGVS
201: RTFAVPGLGP RGKAVAIETA GTQSWGLCKA ETEPVQRQPA TETDITDERK RKTREETNVE NQGTEEARDS TSSKRSRAAI MHKLSERRRR QKINEMMKAL
301: QELLPRCTKT DRSSMLDDVI EYVKSLQSQI QMFSMGHVMI PPMMYAGNIQ QQYMPHMAMG MNRPPAFIPF PRQAHMAEGV GPVDLFRENE ETEQETMSLL
401: LREDKRTKQK MFS
Arabidopsis Description
BHLH23Uncharacterized protein At4g28790 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.