Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007430.1-P | Field mustard | nucleus | 95.7 | 99.3 |
| CDX71916 | Canola | nucleus | 96.61 | 96.39 |
| CDY00603 | Canola | nucleus, plastid | 53.17 | 85.77 |
| CDY67566 | Canola | nucleus, plastid | 53.17 | 85.77 |
| AT3G59060.2 | Thale cress | nucleus | 81.22 | 80.86 |
| CDY30375 | Canola | nucleus | 56.56 | 61.58 |
| CDX70453 | Canola | nucleus | 56.33 | 61.18 |
| CDY29961 | Canola | nucleus | 56.33 | 61.18 |
| CDY14866 | Canola | nucleus | 54.75 | 60.05 |
| CDX83509 | Canola | nucleus | 56.11 | 60.05 |
| CDY42809 | Canola | nucleus | 55.88 | 59.66 |
| CDY37185 | Canola | mitochondrion | 9.5 | 42.86 |
| TraesCS2B01G273500.1 | Wheat | nucleus | 27.38 | 33.8 |
| Os03t0782500-01 | Rice | nucleus | 31.22 | 33.66 |
| TraesCS2A01G253900.2 | Wheat | nucleus | 27.15 | 33.52 |
| HORVU2Hr1G060680.1 | Barley | nucleus | 27.15 | 33.15 |
| KRH45975 | Soybean | nucleus | 39.14 | 32.95 |
| HORVU5Hr1G102240.3 | Barley | nucleus | 28.96 | 32.32 |
| Zm00001d034298_P001 | Maize | nucleus | 30.32 | 31.75 |
| Solyc07g043580.2.1 | Tomato | nucleus | 35.52 | 31.72 |
| VIT_12s0028g01110.t01 | Wine grape | nucleus | 39.59 | 31.36 |
| TraesCS5B01G422000.1 | Wheat | nucleus | 28.73 | 30.98 |
| KRG99030 | Soybean | nucleus | 38.24 | 30.9 |
| PGSC0003DMT400041156 | Potato | nucleus | 35.97 | 30.75 |
| TraesCS5D01G428400.2 | Wheat | nucleus | 28.73 | 30.38 |
| KRH73584 | Soybean | nucleus | 37.33 | 29.36 |
| Zm00001d013130_P001 | Maize | nucleus | 25.57 | 29.2 |
| KRH14535 | Soybean | nucleus | 36.88 | 29.0 |
| TraesCS2D01G254400.3 | Wheat | nucleus | 27.6 | 28.37 |
| TraesCS5A01G420200.1 | Wheat | nucleus | 26.92 | 28.33 |
| OQU88421 | Sorghum | nucleus | 26.47 | 28.33 |
| Os07t0143200-01 | Rice | nucleus | 26.24 | 28.02 |
| CDY24734 | Canola | plastid | 7.69 | 23.94 |
| CDY35224 | Canola | nucleus | 14.03 | 23.94 |
| CDY01438 | Canola | nucleus, plastid | 11.31 | 22.94 |
| CDY12804 | Canola | nucleus, plastid | 11.09 | 22.69 |
| CDY65390 | Canola | nucleus | 10.63 | 22.49 |
| CDY31989 | Canola | nucleus | 24.21 | 22.48 |
| CDX67873 | Canola | nucleus | 15.61 | 22.48 |
| CDY06870 | Canola | nucleus | 22.62 | 21.98 |
| CDY20289 | Canola | nucleus | 10.41 | 21.8 |
| CDX91917 | Canola | nucleus | 16.97 | 21.61 |
| CDY35220 | Canola | nucleus | 18.1 | 21.56 |
| CDY05725 | Canola | nucleus | 24.66 | 21.5 |
| CDX83214 | Canola | nucleus | 16.74 | 21.26 |
| CDY65446 | Canola | nucleus | 15.84 | 21.15 |
| CDY06865 | Canola | nucleus | 16.74 | 20.61 |
| CDX69281 | Canola | nucleus, plastid | 15.84 | 20.06 |
| CDX80064 | Canola | nucleus | 18.1 | 20.0 |
| CDY44048 | Canola | nucleus, plastid | 15.38 | 19.94 |
| CDX74328 | Canola | nucleus | 17.42 | 19.9 |
| CDY22636 | Canola | nucleus | 21.95 | 19.76 |
| CDY22448 | Canola | nucleus, plastid | 15.61 | 19.6 |
| CDY06358 | Canola | nucleus | 21.72 | 19.55 |
| CDX75629 | Canola | nucleus | 15.16 | 19.36 |
| CDY06867 | Canola | nucleus | 21.04 | 19.29 |
| CDY66254 | Canola | nucleus | 17.42 | 19.25 |
| CDY21498 | Canola | nucleus | 16.52 | 18.86 |
| CDX94963 | Canola | nucleus | 21.04 | 18.67 |
| CDY64745 | Canola | nucleus | 20.81 | 18.33 |
| CDX83349 | Canola | nucleus | 16.52 | 18.07 |
| KXG37432 | Sorghum | plastid | 19.68 | 18.05 |
| CDY11836 | Canola | nucleus | 11.31 | 17.48 |
| CDY50911 | Canola | nucleus | 10.63 | 17.34 |
| CDY55014 | Canola | nucleus | 11.31 | 17.3 |
| CDX76616 | Canola | extracellular | 13.8 | 17.04 |
| CDY62262 | Canola | nucleus | 11.54 | 16.89 |
| CDY46133 | Canola | nucleus | 7.24 | 16.75 |
| CDX88653 | Canola | nucleus | 11.31 | 16.67 |
| CDY02785 | Canola | nucleus | 11.09 | 16.55 |
| CDY11401 | Canola | extracellular | 13.12 | 16.48 |
| CDX91293 | Canola | nucleus | 11.09 | 16.44 |
| CDY32733 | Canola | nucleus | 11.09 | 16.23 |
| CDX97278 | Canola | nucleus | 10.63 | 15.72 |
| CDY21898 | Canola | nucleus | 10.63 | 15.61 |
| CDY22062 | Canola | nucleus | 10.63 | 15.46 |
| CDY18011 | Canola | nucleus | 10.63 | 15.46 |
| CDY35222 | Canola | nucleus | 20.14 | 15.42 |
| CDX76819 | Canola | nucleus | 11.76 | 15.29 |
| CDX89919 | Canola | nucleus | 10.63 | 15.11 |
| CDY34780 | Canola | nucleus | 11.54 | 15.09 |
| CDY28232 | Canola | nucleus | 11.09 | 14.98 |
| CDX68710 | Canola | nucleus | 11.09 | 14.98 |
| CDX90930 | Canola | nucleus | 10.41 | 14.84 |
| CDY18143 | Canola | nucleus | 10.18 | 14.71 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 5.66 | 12.32 |
| CDY46132 | Canola | endoplasmic reticulum | 4.3 | 10.8 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.1.4 | Gene3D:4.10.280.10 | GO:A0A078EY10 | EnsemblPlants:CDY06026 | ProteinID:CDY06026 |
| ProteinID:CDY06026.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00121872001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF194 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EDC903 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g37540D
Coordinates
chrLK031967:+:290646..293288
Molecular Weight (calculated)
49692.6 Da
IEP (calculated)
7.224
GRAVY (calculated)
-0.844
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQLFSDWNF EDNFHMSSNK RSVRPEDELV ELLWRDGQVV LQSQVRREPS VQVQTHKHDQ ALRKPNNTYL DNQETIRKHN ENVQGDQETV SWIQYPPEDV
101: VDPFESEFSS HFFSSVDHLD GPNHPKKPLT IKEAAKPEAK AMAPPKFRPP VVSVGPSHCG SNQSTNDHQV THPPVSMSDR SKNVEERLDT SSGGSSGCSK
201: ETESGRSVSI SRKRKHAMDT DQESMSQSDV RLMPTDDQTM GNKSSQRSGS TRRSRAAEVH NLSERRRRDR INERMKALQE LIPHCSKTDK ASILDEAIDY
301: LKTLQMQLQV MWMGSGMAAA AAAAATPMMF PGVQSSQYIN QMAMQSQMQM PQFPVMNRPA AQNHPGLVCQ NPAVQFQMQA QNQMLSEQLA RYMGGFPPMP
401: ATTQTQTVQQ PMDMMRFGSQ VGQQSQLSTP VTTDSLRMGK TG
101: VDPFESEFSS HFFSSVDHLD GPNHPKKPLT IKEAAKPEAK AMAPPKFRPP VVSVGPSHCG SNQSTNDHQV THPPVSMSDR SKNVEERLDT SSGGSSGCSK
201: ETESGRSVSI SRKRKHAMDT DQESMSQSDV RLMPTDDQTM GNKSSQRSGS TRRSRAAEVH NLSERRRRDR INERMKALQE LIPHCSKTDK ASILDEAIDY
301: LKTLQMQLQV MWMGSGMAAA AAAAATPMMF PGVQSSQYIN QMAMQSQMQM PQFPVMNRPA AQNHPGLVCQ NPAVQFQMQA QNQMLSEQLA RYMGGFPPMP
401: ATTQTQTVQQ PMDMMRFGSQ VGQQSQLSTP VTTDSLRMGK TG
001: MEQVFADWNF EDNFHMSTNK RSIRPEDELV ELLWRDGQVV LQSQARREPS VQVQTHKQET LRKPNNIFLD NQETVQKPNY AALDDQETVS WIQYPPDDVI
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQTVQQQ PADMLGFGSP AGPQSQLSAP ATTDSLHMGK IG
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQTVQQQ PADMLGFGSP AGPQSQLSAP ATTDSLHMGK IG
Arabidopsis Description
PIF5Transcription factor PIF5 [Source:UniProtKB/Swiss-Prot;Acc:Q84LH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.