Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012133.1-P | Field mustard | nucleus, plastid | 95.87 | 97.66 |
| CDY12804 | Canola | nucleus, plastid | 95.41 | 96.3 |
| CDY37185 | Canola | mitochondrion | 38.99 | 86.73 |
| CDY24734 | Canola | plastid | 52.75 | 80.99 |
| AT5G67110.1 | Thale cress | nucleus | 73.85 | 76.67 |
| GSMUA_Achr9P11300_001 | Banana | nucleus | 19.72 | 68.25 |
| TraesCS6A01G190600.1 | Wheat | nucleus | 24.77 | 41.86 |
| KRH04711 | Soybean | plastid | 23.85 | 32.5 |
| Os06t0164400-01 | Rice | cytosol, mitochondrion, nucleus | 27.98 | 30.96 |
| KRH05665 | Soybean | nucleus | 36.7 | 26.94 |
| KRH15381 | Soybean | nucleus | 36.24 | 26.6 |
| CDX75629 | Canola | nucleus | 39.91 | 25.14 |
| CDX69281 | Canola | nucleus, plastid | 38.99 | 24.36 |
| CDY44048 | Canola | nucleus, plastid | 36.7 | 23.46 |
| CDY22448 | Canola | nucleus, plastid | 37.61 | 23.3 |
| Solyc04g078690.2.1 | Tomato | nucleus | 33.49 | 23.25 |
| PGSC0003DMT400020534 | Potato | nucleus | 33.49 | 23.25 |
| OQU75890 | Sorghum | nucleus | 30.73 | 23.02 |
| VIT_18s0001g10270.t01 | Wine grape | nucleus | 38.07 | 22.49 |
| Os02t0805250-00 | Rice | nucleus | 27.98 | 21.79 |
| KXG31309 | Sorghum | nucleus | 28.9 | 21.58 |
| Zm00001d045212_P001 | Maize | nucleus | 33.49 | 21.53 |
| TraesCS7A01G126900.1 | Wheat | nucleus | 32.57 | 21.45 |
| TraesCS7D01G124700.1 | Wheat | nucleus | 32.57 | 21.01 |
| TraesCS7B01G026300.1 | Wheat | nucleus | 32.57 | 20.94 |
| HORVU7Hr1G026560.2 | Barley | nucleus | 32.11 | 20.71 |
| GSMUA_Achr10P... | Banana | plastid | 31.65 | 20.12 |
| GSMUA_Achr8P15670_001 | Banana | nucleus | 32.11 | 19.83 |
| CDY65390 | Canola | nucleus | 18.81 | 19.62 |
| HORVU6Hr1G088020.4 | Barley | nucleus | 26.61 | 19.59 |
| CDY20289 | Canola | nucleus | 18.81 | 19.43 |
| TraesCS6D01G357700.1 | Wheat | nucleus | 25.69 | 18.86 |
| TraesCS6B01G411300.1 | Wheat | nucleus | 26.15 | 18.81 |
| TraesCS6A01G373500.2 | Wheat | nucleus | 26.15 | 18.81 |
| CDY35224 | Canola | nucleus | 22.02 | 18.53 |
| Zm00001d018416_P001 | Maize | mitochondrion | 27.98 | 18.48 |
| CDY67566 | Canola | nucleus, plastid | 21.1 | 16.79 |
| CDY00603 | Canola | nucleus, plastid | 21.1 | 16.79 |
| CDY55014 | Canola | nucleus | 21.56 | 16.26 |
| CDY02785 | Canola | nucleus | 21.56 | 15.88 |
| CDY11836 | Canola | nucleus | 20.64 | 15.73 |
| CDX88653 | Canola | nucleus | 21.1 | 15.33 |
| CDY62262 | Canola | nucleus | 21.1 | 15.23 |
| CDY32733 | Canola | nucleus | 21.1 | 15.23 |
| CDX91917 | Canola | nucleus | 23.39 | 14.7 |
| CDY35220 | Canola | nucleus | 24.77 | 14.56 |
| CDX83214 | Canola | nucleus | 22.94 | 14.37 |
| CDY46133 | Canola | nucleus | 12.39 | 14.14 |
| CDX67873 | Canola | nucleus | 19.27 | 13.68 |
| CDY31989 | Canola | nucleus | 29.82 | 13.66 |
| CDY34780 | Canola | nucleus | 21.1 | 13.61 |
| CDX76819 | Canola | nucleus | 21.1 | 13.53 |
| CDX68710 | Canola | nucleus | 20.18 | 13.46 |
| CDY28232 | Canola | nucleus | 20.18 | 13.46 |
| CDX74328 | Canola | nucleus | 23.85 | 13.44 |
| CDY06865 | Canola | nucleus | 22.02 | 13.37 |
| CDX91293 | Canola | nucleus | 17.89 | 13.09 |
| CDX97278 | Canola | nucleus | 17.89 | 13.04 |
| CDY65446 | Canola | nucleus | 19.72 | 12.99 |
| CDY21898 | Canola | nucleus | 17.89 | 12.96 |
| CDY21498 | Canola | nucleus | 22.94 | 12.92 |
| CDY22062 | Canola | nucleus | 17.89 | 12.83 |
| CDY06870 | Canola | nucleus | 26.61 | 12.75 |
| CDY14866 | Canola | nucleus | 23.39 | 12.66 |
| CDY05725 | Canola | nucleus | 29.36 | 12.62 |
| CDY30375 | Canola | nucleus | 23.39 | 12.56 |
| CDY18011 | Canola | nucleus | 17.43 | 12.5 |
| CDY18143 | Canola | nucleus | 17.43 | 12.42 |
| CDX83509 | Canola | nucleus | 23.39 | 12.35 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 11.47 | 12.32 |
| CDX70453 | Canola | nucleus | 22.94 | 12.29 |
| CDY29961 | Canola | nucleus | 22.94 | 12.29 |
| CDY22636 | Canola | nucleus | 27.52 | 12.22 |
| CDX89919 | Canola | nucleus | 17.43 | 12.22 |
| CDY64745 | Canola | nucleus | 27.98 | 12.15 |
| CDX94963 | Canola | nucleus | 27.52 | 12.05 |
| CDX90930 | Canola | nucleus | 16.97 | 11.94 |
| CDY06358 | Canola | nucleus | 26.15 | 11.61 |
| CDY42809 | Canola | nucleus | 22.02 | 11.59 |
| CDY06867 | Canola | nucleus | 25.23 | 11.41 |
| CDY06026 | Canola | nucleus | 22.94 | 11.31 |
| CDX71916 | Canola | nucleus | 22.94 | 11.29 |
| CDY66254 | Canola | nucleus | 20.64 | 11.25 |
| CDX80064 | Canola | nucleus | 20.64 | 11.25 |
| GSMUA_Achr7P20810_001 | Banana | nucleus | 30.73 | 11.19 |
| CDX83349 | Canola | nucleus | 20.18 | 10.89 |
| CDY50911 | Canola | nucleus | 12.39 | 9.96 |
| CDY35222 | Canola | nucleus | 25.69 | 9.71 |
| CDX76616 | Canola | extracellular | 15.6 | 9.5 |
| CDY11401 | Canola | extracellular | 15.14 | 9.38 |
| CDY46132 | Canola | endoplasmic reticulum | 6.88 | 8.52 |
Protein Annotations
| EnsemblPlants:CDY01438 | EnsemblPlantsGene:GSBRNA2T00112438001 | Gene3D:4.10.280.10 | GO:A0A078EPJ2 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF297 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:CDY01438 | ProteinID:CDY01438.1 |
| SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEE452 | MapMan:15.5.32 | : |
Description
BnaA07g12110D
Coordinates
chrLK031926:+:1053193..1059074
Molecular Weight (calculated)
23808.5 Da
IEP (calculated)
9.596
GRAVY (calculated)
-0.565
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNSDEGDRL PAPSSSDELS SILRQVLSRT PTAQPSFSPK KIVSSAEMFN RTFPLLIPTP GGAVSYAACA AAETGEGKCG FENKRNGAKQ RNSLKRNIDA
101: QFHNLSEKRR RSKINEKMKA LQKLIPNSNK TDKASMLDEA IEYLKQLQLQ FQTLAAMNGL GLNPLRLPPI LPPTQTRITG TSEQGLNLET LLGGSHSMAN
201: HEPPEPTQEM CFSTTTLL
101: QFHNLSEKRR RSKINEKMKA LQKLIPNSNK TDKASMLDEA IEYLKQLQLQ FQTLAAMNGL GLNPLRLPPI LPPTQTRITG TSEQGLNLET LLGGSHSMAN
201: HEPPEPTQEM CFSTTTLL
001: MGDSDVGDRL PPPSSSDELS SFLRQILSRT PTAQPSSPPK STNVSSAETF FPSVSGGAVS SVGYGVSETG QDKYAFEHKR SGAKQRNSLK RNIDAQFHNL
101: SEKKRRSKIN EKMKALQKLI PNSNKTDKAS MLDEAIEYLK QLQLQVQTLA VMNGLGLNPM RLPQVPPPTH TRINETLEQD LNLETLLAAP HSLEPAKTSQ
201: GMCFSTATLL
101: SEKKRRSKIN EKMKALQKLI PNSNKTDKAS MLDEAIEYLK QLQLQVQTLA VMNGLGLNPM RLPQVPPPTH TRINETLEQD LNLETLLAAP HSLEPAKTSQ
201: GMCFSTATLL
Arabidopsis Description
ALCTranscription factor ALC [Source:UniProtKB/Swiss-Prot;Acc:Q9FHA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.