Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67566 | Canola | nucleus, plastid | 100.0 | 100.0 |
| CDY06026 | Canola | nucleus | 85.77 | 53.17 |
| CDX71916 | Canola | nucleus | 85.04 | 52.6 |
| AT3G59060.2 | Thale cress | nucleus | 81.75 | 50.45 |
| CDY37185 | Canola | mitochondrion | 14.96 | 41.84 |
| CDX83509 | Canola | nucleus | 61.68 | 40.92 |
| CDY30375 | Canola | nucleus | 59.85 | 40.39 |
| CDY42809 | Canola | nucleus | 60.95 | 40.34 |
| CDY29961 | Canola | nucleus | 58.76 | 39.56 |
| CDX70453 | Canola | nucleus | 58.76 | 39.56 |
| CDY14866 | Canola | nucleus | 56.2 | 38.21 |
| TraesCS2B01G273500.1 | Wheat | nucleus | 35.04 | 26.82 |
| TraesCS2A01G253900.2 | Wheat | nucleus | 34.67 | 26.54 |
| HORVU5Hr1G102240.3 | Barley | nucleus | 37.96 | 26.26 |
| HORVU2Hr1G060680.1 | Barley | nucleus | 34.67 | 26.24 |
| Os03t0782500-01 | Rice | nucleus | 37.96 | 25.37 |
| TraesCS5B01G422000.1 | Wheat | nucleus | 37.59 | 25.12 |
| TraesCS5D01G428400.2 | Wheat | nucleus | 37.23 | 24.4 |
| TraesCS5A01G420200.1 | Wheat | nucleus | 36.86 | 24.05 |
| Zm00001d034298_P001 | Maize | nucleus | 36.5 | 23.7 |
| KRH45975 | Soybean | nucleus | 44.89 | 23.43 |
| Solyc07g043580.2.1 | Tomato | nucleus | 41.97 | 23.23 |
| CDY35224 | Canola | nucleus | 21.9 | 23.17 |
| Os07t0143200-01 | Rice | nucleus | 34.31 | 22.71 |
| VIT_12s0028g01110.t01 | Wine grape | nucleus | 45.99 | 22.58 |
| OQU88421 | Sorghum | nucleus | 33.94 | 22.52 |
| TraesCS2D01G254400.3 | Wheat | nucleus | 35.04 | 22.33 |
| PGSC0003DMT400041156 | Potato | nucleus | 41.97 | 22.24 |
| KRG99030 | Soybean | nucleus | 44.16 | 22.12 |
| CDY24734 | Canola | plastid | 11.31 | 21.83 |
| KRH73584 | Soybean | nucleus | 43.43 | 21.17 |
| CDY01438 | Canola | nucleus, plastid | 16.79 | 21.1 |
| CDY12804 | Canola | nucleus, plastid | 16.42 | 20.83 |
| KRH14535 | Soybean | nucleus | 42.34 | 20.64 |
| CDY65390 | Canola | nucleus | 15.69 | 20.57 |
| Zm00001d013130_P001 | Maize | nucleus | 28.47 | 20.16 |
| CDY20289 | Canola | nucleus | 15.33 | 19.91 |
| CDY44048 | Canola | nucleus, plastid | 23.36 | 18.77 |
| CDY06865 | Canola | nucleus | 24.09 | 18.38 |
| CDY22448 | Canola | nucleus, plastid | 23.36 | 18.18 |
| CDX91917 | Canola | nucleus | 22.99 | 18.16 |
| CDX83214 | Canola | nucleus | 22.99 | 18.1 |
| CDX67873 | Canola | nucleus | 20.07 | 17.92 |
| CDX69281 | Canola | nucleus, plastid | 22.63 | 17.77 |
| CDX75629 | Canola | nucleus | 22.26 | 17.63 |
| CDY31989 | Canola | nucleus | 29.2 | 16.81 |
| CDY65446 | Canola | nucleus | 20.07 | 16.62 |
| CDX74328 | Canola | nucleus | 23.36 | 16.54 |
| CDX80064 | Canola | nucleus | 23.72 | 16.25 |
| CDY05725 | Canola | nucleus | 29.93 | 16.17 |
| CDY22636 | Canola | nucleus | 28.83 | 16.09 |
| CDY06870 | Canola | nucleus | 26.64 | 16.04 |
| CDY06358 | Canola | nucleus | 28.47 | 15.89 |
| CDY11836 | Canola | nucleus | 16.42 | 15.73 |
| CDY55014 | Canola | nucleus | 16.42 | 15.57 |
| CDY21498 | Canola | nucleus | 21.9 | 15.5 |
| CDY66254 | Canola | nucleus | 22.63 | 15.5 |
| KXG37432 | Sorghum | plastid | 27.01 | 15.35 |
| CDX94963 | Canola | nucleus | 27.74 | 15.26 |
| CDY62262 | Canola | nucleus | 16.79 | 15.23 |
| CDY02785 | Canola | nucleus | 16.42 | 15.2 |
| CDY50911 | Canola | nucleus | 14.96 | 15.13 |
| CDX88653 | Canola | nucleus | 16.42 | 15.0 |
| CDY64745 | Canola | nucleus | 27.37 | 14.94 |
| CDY32733 | Canola | nucleus | 16.42 | 14.9 |
| CDX68710 | Canola | nucleus | 17.52 | 14.68 |
| CDY28232 | Canola | nucleus | 17.52 | 14.68 |
| CDY46133 | Canola | nucleus | 10.22 | 14.66 |
| CDX83349 | Canola | nucleus | 21.53 | 14.6 |
| CDY35220 | Canola | nucleus | 19.34 | 14.29 |
| CDY34780 | Canola | nucleus | 17.15 | 13.91 |
| CDX76819 | Canola | nucleus | 17.15 | 13.82 |
| CDX91293 | Canola | nucleus | 14.96 | 13.76 |
| CDY06867 | Canola | nucleus | 24.09 | 13.69 |
| CDY21898 | Canola | nucleus | 14.96 | 13.62 |
| CDY22062 | Canola | nucleus | 14.96 | 13.49 |
| CDY18011 | Canola | nucleus | 14.96 | 13.49 |
| CDY18143 | Canola | nucleus | 14.96 | 13.4 |
| CDX97278 | Canola | nucleus | 14.6 | 13.38 |
| CDX89919 | Canola | nucleus | 14.96 | 13.18 |
| CDX76616 | Canola | extracellular | 17.15 | 13.13 |
| CDX90930 | Canola | nucleus | 14.6 | 12.9 |
| CDY11401 | Canola | extracellular | 16.06 | 12.5 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 8.76 | 11.82 |
| CDY35222 | Canola | nucleus | 23.72 | 11.27 |
| CDY46132 | Canola | endoplasmic reticulum | 6.2 | 9.66 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.1.4 | Gene3D:4.10.280.10 | GO:A0A078JPB6 | UniProt:A0A078JPB6 | EnsemblPlants:CDY00603 |
| ProteinID:CDY00603 | ProteinID:CDY00603.1 | ProteinID:CDY67566.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00110371001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF194 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0004EF1885 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
BnaC04g23220DBnaC04g23220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPB6]
Coordinates
chrLK031920:-:619731..620857
Molecular Weight (calculated)
30815.9 Da
IEP (calculated)
9.836
GRAVY (calculated)
-0.758
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPKFRSSV VTVGTSHCGS NQSTNDHQVT HPQFPMSDRS KNVEQRLDTS SGGSSGCSKE NESGRSVTIS RKRKHVMDTD QESVSQSDVR LMSTDDQIMG
101: NKSSQRSGST RRSRAAEVHN LSERKRRDRI NERMKALQEL IPHCNRTDKA SILDEAIDYL KSLQMQLQVM WMGRGMAAAA ATPMMFPGVQ SSQYINQMAM
201: QSQMQQPQFP VMNRLVAQSH PCLVCQNPVM QLQMQAQNHI LSEQLSRYMG GFPPMPATTQ VQQQPMEETQ IIKK
101: NKSSQRSGST RRSRAAEVHN LSERKRRDRI NERMKALQEL IPHCNRTDKA SILDEAIDYL KSLQMQLQVM WMGRGMAAAA ATPMMFPGVQ SSQYINQMAM
201: QSQMQQPQFP VMNRLVAQSH PCLVCQNPVM QLQMQAQNHI LSEQLSRYMG GFPPMPATTQ VQQQPMEETQ IIKK
001: MEQVFADWNF EDNFHMSTNK RSIRPEDELV ELLWRDGQVV LQSQARREPS VQVQTHKQET LRKPNNIFLD NQETVQKPNY AALDDQETVS WIQYPPDDVI
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQTVQQQ PADMLGFGSP AGPQSQLSAP ATTDSLHMGK IG
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQTVQQQ PADMLGFGSP AGPQSQLSAP ATTDSLHMGK IG
Arabidopsis Description
PIF5Transcription factor PIF5 [Source:UniProtKB/Swiss-Prot;Acc:Q84LH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.