Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76616 | Canola | extracellular | 96.02 | 94.41 |
| Bra007660.1-P | Field mustard | nucleus | 94.6 | 78.91 |
| CDY65446 | Canola | nucleus | 69.03 | 73.41 |
| CDX67873 | Canola | nucleus | 61.93 | 71.01 |
| AT3G62090.2 | Thale cress | nucleus | 67.05 | 65.01 |
| CDX80064 | Canola | nucleus | 41.48 | 36.5 |
| CDY66254 | Canola | nucleus | 40.62 | 35.75 |
| CDY50911 | Canola | nucleus | 26.99 | 35.06 |
| CDX83349 | Canola | nucleus | 40.06 | 34.9 |
| CDY37185 | Canola | mitochondrion | 7.95 | 28.57 |
| KRH69138 | Soybean | cytosol, nucleus, vacuole | 11.93 | 23.33 |
| VIT_07s0005g02510.t01 | Wine grape | nucleus | 12.5 | 22.0 |
| CDY65390 | Canola | nucleus | 12.22 | 20.57 |
| CDX91917 | Canola | nucleus | 17.61 | 17.87 |
| CDX83214 | Canola | nucleus | 17.05 | 17.24 |
| CDX74328 | Canola | nucleus | 18.18 | 16.54 |
| KRH33663 | Soybean | nucleus | 21.02 | 16.48 |
| CDY24734 | Canola | plastid | 6.53 | 16.2 |
| CDY67566 | Canola | nucleus, plastid | 12.5 | 16.06 |
| CDY00603 | Canola | nucleus, plastid | 12.5 | 16.06 |
| CDY21498 | Canola | nucleus | 17.33 | 15.76 |
| CDY35224 | Canola | nucleus | 11.36 | 15.44 |
| CDY12804 | Canola | nucleus, plastid | 9.38 | 15.28 |
| CDY01438 | Canola | nucleus, plastid | 9.38 | 15.14 |
| CDX83509 | Canola | nucleus | 17.05 | 14.53 |
| CDY31989 | Canola | nucleus | 18.75 | 13.87 |
| CDY42809 | Canola | nucleus | 16.19 | 13.77 |
| CDY14866 | Canola | nucleus | 15.62 | 13.65 |
| KRH68348 | Soybean | nucleus | 19.89 | 13.54 |
| CDY29961 | Canola | nucleus | 15.62 | 13.51 |
| CDX70453 | Canola | nucleus | 15.62 | 13.51 |
| CDY05725 | Canola | nucleus | 19.32 | 13.41 |
| KRG96615 | Soybean | nucleus | 19.6 | 13.32 |
| CDY30375 | Canola | nucleus | 15.34 | 13.3 |
| CDY44048 | Canola | nucleus, plastid | 12.78 | 13.2 |
| CDY06026 | Canola | nucleus | 16.48 | 13.12 |
| CDX71916 | Canola | nucleus | 16.48 | 13.09 |
| Zm00001d024783_P001 | Maize | nucleus | 18.47 | 12.87 |
| CDX75629 | Canola | nucleus | 12.5 | 12.72 |
| CDY11836 | Canola | nucleus | 10.23 | 12.59 |
| CDY22448 | Canola | nucleus, plastid | 12.5 | 12.5 |
| CDY02785 | Canola | nucleus | 10.51 | 12.5 |
| CDY46132 | Canola | endoplasmic reticulum | 6.25 | 12.5 |
| CDY55014 | Canola | nucleus | 10.23 | 12.46 |
| CDX69281 | Canola | nucleus, plastid | 12.22 | 12.32 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 7.1 | 12.32 |
| CDY06870 | Canola | nucleus | 15.91 | 12.31 |
| CDY21898 | Canola | nucleus | 10.51 | 12.29 |
| Os05t0139100-01 | Rice | nucleus | 17.61 | 12.28 |
| CDY32733 | Canola | nucleus | 10.51 | 12.25 |
| CDY28232 | Canola | nucleus | 11.36 | 12.23 |
| CDY22062 | Canola | nucleus | 10.51 | 12.17 |
| CDY18143 | Canola | nucleus | 10.51 | 12.09 |
| CDX91293 | Canola | nucleus | 10.23 | 12.08 |
| CDX97278 | Canola | nucleus | 10.23 | 12.04 |
| CDX88653 | Canola | nucleus | 10.23 | 12.0 |
| CDY64745 | Canola | nucleus | 17.05 | 11.95 |
| TraesCS1B01G100400.2 | Wheat | nucleus | 17.05 | 11.95 |
| TraesCS1D01G084200.1 | Wheat | nucleus | 17.05 | 11.95 |
| CDX68710 | Canola | nucleus | 11.08 | 11.93 |
| CDY62262 | Canola | nucleus | 10.23 | 11.92 |
| CDX89919 | Canola | nucleus | 10.51 | 11.9 |
| CDY20289 | Canola | nucleus | 7.1 | 11.85 |
| CDY34780 | Canola | nucleus | 11.36 | 11.83 |
| CDX76819 | Canola | nucleus | 11.36 | 11.76 |
| CDY06865 | Canola | nucleus | 11.93 | 11.7 |
| TraesCS1A01G083000.1 | Wheat | nucleus | 16.76 | 11.64 |
| CDY18011 | Canola | nucleus | 9.94 | 11.51 |
| CDX94963 | Canola | nucleus | 16.19 | 11.45 |
| HORVU1Hr1G017900.1 | Barley | nucleus | 15.91 | 11.36 |
| Zm00001d040536_P005 | Maize | nucleus | 18.18 | 11.29 |
| KXG32305 | Sorghum | nucleus | 19.03 | 11.09 |
| CDX90930 | Canola | nucleus | 9.66 | 10.97 |
| CDY22636 | Canola | nucleus | 15.06 | 10.79 |
| GSMUA_Achr1P19000_001 | Banana | mitochondrion, nucleus | 18.18 | 10.79 |
| CDY35220 | Canola | nucleus | 11.08 | 10.51 |
| PGSC0003DMT400047079 | Potato | nucleus | 21.02 | 10.45 |
| CDY06358 | Canola | nucleus | 14.49 | 10.39 |
| Zm00001d008205_P001 | Maize | nucleus | 18.75 | 10.34 |
| Os01t0286100-01 | Rice | nucleus | 18.47 | 10.2 |
| KXG21255 | Sorghum | nucleus | 19.32 | 9.88 |
| Solyc01g102300.2.1 | Tomato | nucleus | 19.89 | 9.79 |
| CDY06867 | Canola | nucleus | 13.07 | 9.54 |
| CDY46133 | Canola | nucleus | 4.83 | 8.9 |
| CDY35222 | Canola | nucleus | 13.64 | 8.32 |
Protein Annotations
| EnsemblPlants:CDY11401 | EnsemblPlantsGene:GSBRNA2T00049463001 | Gene3D:4.10.280.10 | GO:A0A078FDK3 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF194 | PFscan:PS50888 | ProteinID:CDY11401 | ProteinID:CDY11401.1 |
| SEG:seg | SUPFAM:SSF47459 | UniParc:UPI0004EDC9DD | UniProt:A0A078FDK3 | MapMan:15.5.32 | : |
Description
BnaA09g39670DBnaA09g39670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDK3]
Coordinates
chrLK032011:-:236554..237870
Molecular Weight (calculated)
39324.0 Da
IEP (calculated)
4.725
GRAVY (calculated)
-0.447
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MQMMFVLTKL IYCCCRLTDQ EYMELVFENG QILAKSQRSN GFSMHNQRTK SIVDLYEAEY NEDFKKTIHG ADTSDKNLVD TQVVPEPLVV AAYETNMLMN
101: QLNLIQSLKA SSSKRMVVDY ENRKDIVPPD EQSVVAERSV ELGYDSTDFT EDSEESTYQS SSLDDVRPQV PARTSNILVK RRRKQKETND INKKMRNLQD
201: LLPNSQKEDN EALLDEAINY MTTLQHQVQM MTMGNRFVTP ATVLPLGPQY SQMGLAIGMQ MGVPQLLPAP VLGAGLPLVG TQADVLRVLN HPVLMPIQDS
301: APFTPMENYL PQSVPPACAA FPNLIPNSTT SSNLDDARTH GGNLSGKESD KP
101: QLNLIQSLKA SSSKRMVVDY ENRKDIVPPD EQSVVAERSV ELGYDSTDFT EDSEESTYQS SSLDDVRPQV PARTSNILVK RRRKQKETND INKKMRNLQD
201: LLPNSQKEDN EALLDEAINY MTTLQHQVQM MTMGNRFVTP ATVLPLGPQY SQMGLAIGMQ MGVPQLLPAP VLGAGLPLVG TQADVLRVLN HPVLMPIQDS
301: APFTPMENYL PQSVPPACAA FPNLIPNSTT SSNLDDARTH GGNLSGKESD KP
001: MMFLPTDYCC RLSDQEYMEL VFENGQILAK GQRSNVSLHN QRTKSIMDLY EAEYNEDFMK SIIHGGGGAI TNLGDTQVVP QSHVAAAHET NMLESNKHVD
101: DSETLKASSS KRMMVDYHNR KKIKFIPPDE QSVVADRSFK LGFDTSSVGF TEDSEGSMYL SSSLDDESDD ARPQVPARTR KALVKRKRNA EAYNSPERNQ
201: RNDINKKMRT LQNLLPNSHK DDNESMLDEA INYMTNLQLQ VQMMTMGNRF VTPSMMMPLG PNYSQMGLAM GVGMQMGEQQ FLPAHVLGAG LPGINDSADM
301: LRFLNHPGLM PMQNSAPFIP TENCSPQSVP PSCAAFPNQI PNPNSLSNLD GATLHKKSRK TNR
101: DSETLKASSS KRMMVDYHNR KKIKFIPPDE QSVVADRSFK LGFDTSSVGF TEDSEGSMYL SSSLDDESDD ARPQVPARTR KALVKRKRNA EAYNSPERNQ
201: RNDINKKMRT LQNLLPNSHK DDNESMLDEA INYMTNLQLQ VQMMTMGNRF VTPSMMMPLG PNYSQMGLAM GVGMQMGEQQ FLPAHVLGAG LPGINDSADM
301: LRFLNHPGLM PMQNSAPFIP TENCSPQSVP PSCAAFPNQI PNPNSLSNLD GATLHKKSRK TNR
Arabidopsis Description
PIF6PIL2 [Source:UniProtKB/TrEMBL;Acc:A0A178VFI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.