Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007863.1-P | Field mustard | nucleus | 99.11 | 99.11 |
| CDX76819 | Canola | nucleus | 94.67 | 94.12 |
| CDY20289 | Canola | nucleus | 50.0 | 80.09 |
| AT2G24260.1 | Thale cress | nucleus | 81.07 | 78.29 |
| CDY46133 | Canola | nucleus | 42.6 | 75.39 |
| CDY46132 | Canola | endoplasmic reticulum | 36.39 | 69.89 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 39.94 | 66.5 |
| CDY28232 | Canola | nucleus | 55.33 | 57.19 |
| CDX68710 | Canola | nucleus | 54.73 | 56.57 |
| CDY11836 | Canola | nucleus | 37.28 | 44.06 |
| CDY55014 | Canola | nucleus | 37.57 | 43.94 |
| CDY02785 | Canola | nucleus | 37.57 | 42.91 |
| CDX88653 | Canola | nucleus | 37.28 | 42.0 |
| CDY32733 | Canola | nucleus | 37.28 | 41.72 |
| CDY62262 | Canola | nucleus | 37.28 | 41.72 |
| CDY37185 | Canola | mitochondrion | 11.24 | 38.78 |
| CDX91293 | Canola | nucleus | 32.25 | 36.58 |
| CDY21898 | Canola | nucleus | 32.54 | 36.54 |
| CDY22062 | Canola | nucleus | 32.54 | 36.18 |
| CDY18011 | Canola | nucleus | 32.25 | 35.86 |
| CDX97278 | Canola | nucleus | 31.07 | 35.12 |
| CDX90930 | Canola | nucleus | 31.95 | 34.84 |
| CDY18143 | Canola | nucleus | 30.77 | 33.99 |
| CDX89919 | Canola | nucleus | 30.77 | 33.44 |
| CDY24734 | Canola | plastid | 10.65 | 25.35 |
| CDY12804 | Canola | nucleus, plastid | 13.61 | 21.3 |
| CDY01438 | Canola | nucleus, plastid | 13.61 | 21.1 |
| CDY65390 | Canola | nucleus | 11.83 | 19.14 |
| CDY35224 | Canola | nucleus | 13.61 | 17.76 |
| CDY67566 | Canola | nucleus, plastid | 13.91 | 17.15 |
| CDY00603 | Canola | nucleus, plastid | 13.91 | 17.15 |
| CDX91917 | Canola | nucleus | 15.38 | 14.99 |
| CDY44048 | Canola | nucleus, plastid | 15.09 | 14.96 |
| CDX83214 | Canola | nucleus | 15.38 | 14.94 |
| CDX69281 | Canola | nucleus, plastid | 15.38 | 14.9 |
| CDX75629 | Canola | nucleus | 15.09 | 14.74 |
| CDY22448 | Canola | nucleus, plastid | 15.09 | 14.49 |
| CDX83509 | Canola | nucleus | 16.57 | 13.56 |
| CDY35220 | Canola | nucleus | 14.79 | 13.48 |
| CDX74328 | Canola | nucleus | 15.38 | 13.44 |
| CDX67873 | Canola | nucleus | 12.13 | 13.36 |
| CDY14866 | Canola | nucleus | 15.68 | 13.15 |
| CDY42809 | Canola | nucleus | 15.98 | 13.04 |
| CDX70453 | Canola | nucleus | 15.68 | 13.02 |
| CDY29961 | Canola | nucleus | 15.68 | 13.02 |
| CDY21498 | Canola | nucleus | 14.79 | 12.92 |
| CDY31989 | Canola | nucleus | 18.05 | 12.82 |
| CDY06865 | Canola | nucleus | 13.61 | 12.81 |
| CDY30375 | Canola | nucleus | 15.38 | 12.81 |
| CDX80064 | Canola | nucleus | 15.09 | 12.75 |
| CDY06870 | Canola | nucleus | 17.16 | 12.75 |
| CDX83349 | Canola | nucleus | 15.09 | 12.62 |
| CDY05725 | Canola | nucleus | 18.93 | 12.62 |
| CDY50911 | Canola | nucleus | 10.06 | 12.55 |
| CDY65446 | Canola | nucleus | 12.13 | 12.39 |
| CDY66254 | Canola | nucleus | 14.5 | 12.25 |
| CDY06867 | Canola | nucleus | 17.16 | 12.03 |
| CDY06026 | Canola | nucleus | 15.09 | 11.54 |
| CDX71916 | Canola | nucleus | 15.09 | 11.51 |
| CDY11401 | Canola | extracellular | 11.83 | 11.36 |
| CDY06358 | Canola | nucleus | 16.27 | 11.2 |
| CDX76616 | Canola | extracellular | 11.83 | 11.17 |
| CDY22636 | Canola | nucleus | 15.98 | 11.0 |
| CDX94963 | Canola | nucleus | 15.68 | 10.64 |
| CDY64745 | Canola | nucleus | 15.68 | 10.56 |
| CDY35222 | Canola | nucleus | 16.57 | 9.71 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078H8E8 | UniProt:A0A078H8E8 | EnsemblPlants:CDY34780 | ProteinID:CDY34780 |
| ProteinID:CDY34780.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00057325001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 |
| PANTHER:PTHR16223:SF28 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EDFC2F | InterPro:bHLH_dom | SEG:seg |
Description
BnaA09g41470DBnaA09g41470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8E8]
Coordinates
chrLK032341:+:237962..240908
Molecular Weight (calculated)
35614.0 Da
IEP (calculated)
6.962
GRAVY (calculated)
-0.435
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSSLLTPSS SSHVQTPATT FDHEDFLDQI FASSPWPSDE AHPPPPPPPP PSSDGFVDSR HQQIMMMPLP SHHRNEVVDG SSVHSLYNGF SACGSLPFHI
101: PQGSAGGMMN QQGQALTQTQ AQKQPQVSAS IATGGTAAAP PQSRTKVRAR RGQATDPHSI AERLRRERIA ERMKGLQELV PNGNKTDKAS MLDEIIDYVK
201: FLQLQVKVLS MSRLGGGASI PSQISEENAS SAVAGGNQAT GNSNDSLTMT EHQVAKLMEE DMGSAMQYLQ GKGLCLMPIS LATAISTATC HSRAAGNVGG
301: HPSSPNLSGM TVQSTNKVKL SGNGVTEGSS PLAVKEAV
101: PQGSAGGMMN QQGQALTQTQ AQKQPQVSAS IATGGTAAAP PQSRTKVRAR RGQATDPHSI AERLRRERIA ERMKGLQELV PNGNKTDKAS MLDEIIDYVK
201: FLQLQVKVLS MSRLGGGASI PSQISEENAS SAVAGGNQAT GNSNDSLTMT EHQVAKLMEE DMGSAMQYLQ GKGLCLMPIS LATAISTATC HSRAAGNVGG
301: HPSSPNLSGM TVQSTNKVKL SGNGVTEGSS PLAVKEAV
001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
Arabidopsis Description
BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.