Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G46970.1 | KRH03510 | AT5G61380.1 | 11828029 |
| AT2G46970.1 | KRH54582 | AT5G61380.1 | 11828029 |
| AT2G46970.1 | KRH56889 | AT5G61380.1 | 11828029 |
| AT2G46970.1 | KRH63298 | AT5G61380.1 | 11828029 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69138 | Soybean | cytosol, nucleus, vacuole | 34.74 | 86.67 |
| KRH68348 | Soybean | nucleus | 48.78 | 42.36 |
| KRG96615 | Soybean | nucleus | 48.55 | 42.08 |
| KRH71636 | Soybean | golgi, plasma membrane, vacuole | 14.25 | 41.83 |
| VIT_07s0005g02510.t01 | Wine grape | nucleus | 14.48 | 32.5 |
| KRH04711 | Soybean | plastid | 10.02 | 28.12 |
| KRH76132 | Soybean | nucleus | 10.69 | 26.23 |
| KRH04595 | Soybean | nucleus | 15.37 | 25.37 |
| KRH72281 | Soybean | nucleus, plastid | 6.9 | 24.8 |
| CDX67873 | Canola | nucleus | 16.93 | 24.76 |
| Bra003483.1-P | Field mustard | nucleus | 16.7 | 24.43 |
| CDY65446 | Canola | nucleus | 17.37 | 23.57 |
| AT2G46970.1 | Thale cress | nucleus | 20.94 | 22.6 |
| AT3G62090.2 | Thale cress | nucleus | 17.82 | 22.04 |
| KRH28453 | Soybean | nucleus | 14.25 | 21.99 |
| KRH15381 | Soybean | nucleus | 14.48 | 21.89 |
| KRH05665 | Soybean | nucleus | 14.48 | 21.89 |
| KRH55381 | Soybean | cytosol | 3.34 | 21.74 |
| CDX76616 | Canola | extracellular | 16.93 | 21.23 |
| CDY11401 | Canola | extracellular | 16.48 | 21.02 |
| CDX80064 | Canola | nucleus | 18.71 | 21.0 |
| Bra004489.1-P | Field mustard | nucleus | 18.71 | 21.0 |
| KRH77016 | Soybean | nucleus | 17.37 | 20.8 |
| CDX83349 | Canola | nucleus | 18.71 | 20.79 |
| Bra000436.1-P | Field mustard | nucleus | 18.71 | 20.79 |
| KRH67519 | Soybean | nucleus | 22.72 | 20.32 |
| KRH32290 | Soybean | nucleus | 22.05 | 20.16 |
| KRH54630 | Soybean | nucleus | 18.04 | 20.15 |
| KRH19683 | Soybean | nucleus | 22.49 | 19.84 |
| CDY66254 | Canola | nucleus | 17.59 | 19.75 |
| Os05t0139100-01 | Rice | nucleus | 22.05 | 19.6 |
| CDY50911 | Canola | nucleus | 11.8 | 19.56 |
| HORVU1Hr1G017900.1 | Barley | nucleus | 21.38 | 19.47 |
| KRH68390 | Soybean | nucleus | 26.95 | 19.39 |
| TraesCS1B01G100400.2 | Wheat | nucleus | 21.6 | 19.32 |
| TraesCS1D01G084200.1 | Wheat | nucleus | 21.6 | 19.32 |
| KRH45975 | Soybean | nucleus | 22.49 | 19.24 |
| TraesCS1A01G083000.1 | Wheat | nucleus | 21.6 | 19.13 |
| Zm00001d024783_P001 | Maize | nucleus | 20.94 | 18.61 |
| KRG96663 | Soybean | nucleus | 26.06 | 18.48 |
| KRG99030 | Soybean | nucleus | 22.27 | 18.28 |
| Zm00001d040536_P005 | Maize | nucleus | 22.72 | 17.99 |
| KXG32305 | Sorghum | nucleus | 23.83 | 17.72 |
| KRH75301 | Soybean | nucleus | 18.04 | 17.69 |
| KRH14535 | Soybean | nucleus | 22.05 | 17.62 |
| KRH71345 | Soybean | nucleus | 6.9 | 17.51 |
| KRH33733 | Soybean | nucleus | 26.95 | 17.51 |
| KRH73584 | Soybean | nucleus | 21.83 | 17.44 |
| Bra007660.1-P | Field mustard | nucleus | 16.26 | 17.3 |
| GSMUA_Achr1P19000_001 | Banana | mitochondrion, nucleus | 22.72 | 17.2 |
| KRG88937 | Soybean | nucleus | 17.37 | 16.77 |
| KRG90443 | Soybean | nucleus | 26.5 | 16.48 |
| Zm00001d008205_P001 | Maize | nucleus | 23.16 | 16.3 |
| KRH65412 | Soybean | nucleus | 14.25 | 16.12 |
| PGSC0003DMT400047079 | Potato | nucleus | 25.39 | 16.1 |
| Os01t0286100-01 | Rice | nucleus | 22.49 | 15.86 |
| Solyc01g102300.2.1 | Tomato | nucleus | 24.72 | 15.52 |
| KRG95612 | Soybean | nucleus | 10.02 | 15.41 |
| KRH03075 | Soybean | nucleus | 12.47 | 15.26 |
| KRH67287 | Soybean | nucleus | 9.8 | 15.07 |
| KRH32094 | Soybean | nucleus | 9.35 | 14.84 |
| KXG21255 | Sorghum | nucleus | 22.05 | 14.39 |
| KRH05051 | Soybean | nucleus | 11.58 | 13.0 |
| KRG92679 | Soybean | nucleus | 9.35 | 12.65 |
| KRH34087 | Soybean | nucleus | 9.13 | 12.5 |
| KRH12909 | Soybean | nucleus | 12.69 | 12.0 |
| KRH37912 | Soybean | nucleus | 12.69 | 11.63 |
| KRH71344 | Soybean | cytosol | 1.11 | 6.67 |
Protein Annotations
| EntrezGene:100818543 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02006548 | EnsemblPlantsGene:GLYMA_10G138800 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| UniProt:K7LJB0 | EnsemblPlants:KRH33663 | ProteinID:KRH33663 | ProteinID:KRH33663.1 | ProteinID:KRH33664.1 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF284 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00029519BC |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:37245347..37247924
Molecular Weight (calculated)
49164.0 Da
IEP (calculated)
8.231
GRAVY (calculated)
-0.688
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEKMPDST KPGMTRSTSY LDSIYGKGSL ELVWENGQLH VQQGGSSSTS SVVTRMTPSC EGSFNAKSAR LSSLYSLMDF PVQRDSALDN SQPNSHQSND
101: QNSGKFAKAA NSSSKGLDRS LVINSPKGSP GRQKNPLNSD TSNMVPRSEE TTPPDEQSEA VGHDSIHGSR GQYFNQTSSS ARHRAKGKAH DTKQKYCDEG
201: LLESSSLCSI GASNNRNVCS RTHDDIDDST YLSNNDEEPE DVVKEKPAWE GTGVKRSRNA EVHNLCERKR RDKINKRMRI LKELIPNCNK TDKASMLDDA
301: IEYLKTLKLQ LQMMSMGAGF CMPFMMLPNA AHHMMNTPHL HQLMGLGMGF RPGTAMPCSL PQFPITPLHG ITDNRVHMFG FPNQVPPMPI SHAPFIPMLG
401: NPSTQPTPLA TSTNINLAEN PASSQLTTLM ASSPKNLFIS GQAEYATKQ
101: QNSGKFAKAA NSSSKGLDRS LVINSPKGSP GRQKNPLNSD TSNMVPRSEE TTPPDEQSEA VGHDSIHGSR GQYFNQTSSS ARHRAKGKAH DTKQKYCDEG
201: LLESSSLCSI GASNNRNVCS RTHDDIDDST YLSNNDEEPE DVVKEKPAWE GTGVKRSRNA EVHNLCERKR RDKINKRMRI LKELIPNCNK TDKASMLDDA
301: IEYLKTLKLQ LQMMSMGAGF CMPFMMLPNA AHHMMNTPHL HQLMGLGMGF RPGTAMPCSL PQFPITPLHG ITDNRVHMFG FPNQVPPMPI SHAPFIPMLG
401: NPSTQPTPLA TSTNINLAEN PASSQLTTLM ASSPKNLFIS GQAEYATKQ
001: MEAKPLASSS SEPNMISPSS NIKPKLKDED YMELVCENGQ ILAKIRRPKN NGSFQKQRRQ SLLDLYETEY SEGFKKNIKI LGDTQVVPVS QSKPQQDKET
101: NEQMNNNKKK LKSSKIEFER NVSKSNKCVE SSTLIDVSAK GPKNVEVTTA PPDEQSAAVG RSTELYFASS SKFSRGTSRD LSCCSLKRKY GDIEEEESTY
201: LSNNSDDESD DAKTQVHART RKPVTKRKRS TEVHKLYERK RRDEFNKKMR ALQDLLPNCY KDDKASLLDE AIKYMRTLQL QVQMMSMGNG LIRPPTMLPM
301: GHYSPMGLGM HMGAAATPTS IPQFLPMNVQ ATGFPGMNNA PPQMLSFLNH PSGLIPNTPI FSPLENCSQP FVVPSCVSQT QATSFTQFPK SASASNLEDA
401: MQYRGSNGFS YYRSPN
101: NEQMNNNKKK LKSSKIEFER NVSKSNKCVE SSTLIDVSAK GPKNVEVTTA PPDEQSAAVG RSTELYFASS SKFSRGTSRD LSCCSLKRKY GDIEEEESTY
201: LSNNSDDESD DAKTQVHART RKPVTKRKRS TEVHKLYERK RRDEFNKKMR ALQDLLPNCY KDDKASLLDE AIKYMRTLQL QVQMMSMGNG LIRPPTMLPM
301: GHYSPMGLGM HMGAAATPTS IPQFLPMNVQ ATGFPGMNNA PPQMLSFLNH PSGLIPNTPI FSPLENCSQP FVVPSCVSQT QATSFTQFPK SASASNLEDA
401: MQYRGSNGFS YYRSPN
Arabidopsis Description
PIL1Transcription factor PIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5W8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.