CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12909	Soybean	nucleus	88.57	91.37
KRH03075	Soybean	nucleus	54.49	72.75
VIT_11s0037g00040.t01	Wine grape	nucleus	65.51	63.69
PGSC0003DMT400020244	Potato	nucleus	49.59	63.61
Solyc12g010170.1.1	Tomato	nucleus	49.39	62.53
KRH72281	Soybean	nucleus, plastid	15.92	62.4
PGSC0003DMT400028917	Potato	nucleus	52.04	57.43
Solyc07g005400.2.1	Tomato	nucleus	51.02	56.82
KRH55381	Soybean	cytosol	7.96	56.52
GSMUA_Achr4P01910_001	Banana	nucleus	49.39	53.9
GSMUA_Achr3P04630_001	Banana	nucleus	49.59	49.8
KRH71344	Soybean	cytosol	7.55	49.33
KRH32094	Soybean	nucleus	28.37	49.12
KRG95612	Soybean	nucleus	29.18	48.97
KRH67287	Soybean	nucleus	28.57	47.95
KRH71345	Soybean	nucleus	16.33	45.2
KRH34087	Soybean	nucleus	29.59	44.21
KRG92679	Soybean	nucleus	29.39	43.37
KRH71636	Soybean	golgi, plasma membrane, vacuole	9.8	31.37
KRH04711	Soybean	plastid	9.39	28.75
KRH76132	Soybean	nucleus	9.8	26.23
KRH69138	Soybean	cytosol, nucleus, vacuole	7.35	20.0
KRH15381	Soybean	nucleus	11.63	19.19
KRH05665	Soybean	nucleus	11.63	19.19
KRH04595	Soybean	nucleus	10.41	18.75
KRH28453	Soybean	nucleus	10.61	17.87
KRH77016	Soybean	nucleus	12.86	16.8
KRH32290	Soybean	nucleus	15.51	15.48
KRH67519	Soybean	nucleus	15.1	14.74
KRH65412	Soybean	nucleus	11.84	14.61
KRH19683	Soybean	nucleus	15.1	14.54
KRH45975	Soybean	nucleus	14.9	13.9
KRG88937	Soybean	nucleus	13.06	13.76
KRH75301	Soybean	nucleus	12.86	13.76
KRG99030	Soybean	nucleus	15.1	13.53
KRH54630	Soybean	nucleus	11.02	13.43
KRH73584	Soybean	nucleus	14.9	12.99
KRH33663	Soybean	nucleus	11.63	12.69
KRH14535	Soybean	nucleus	14.49	12.63
KRH68348	Soybean	nucleus	13.27	12.57
KRG96615	Soybean	nucleus	12.45	11.78
KRH33733	Soybean	nucleus	15.92	11.29
KRG90443	Soybean	nucleus	15.71	10.66
KRH68390	Soybean	nucleus	11.84	9.29
KRG96663	Soybean	nucleus	11.43	8.85
KRH05051	Soybean	nucleus	5.31	6.5

Protein Annotations

EntrezGene:100807286	MapMan:15.5.32	Gene3D:4.10.280.10	EMBL:ACUP02005559	EnsemblPlantsGene:GLYMA_09G098300	GO:GO:0001046
GO:GO:0001228	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006366	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	UniProt:I1L2E0	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KRH37912
ProteinID:KRH37912	ProteinID:KRH37912.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR16223	PANTHER:PTHR16223:SF28
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00023CAE5B	InterPro:bHLH_dom	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:16910152..16914573

Molecular Weight (calculated)

51776.1 Da

IEP (calculated)

6.545

GRAVY (calculated)

-0.562

Length

490 amino acids

Sequence
(BLAST)

001: MQPCSREMQG LNSLLNSSSQ ISLQDLHNHT TNQIQNSHMN HQHHHQQQQQ HQQQQHQLAH FDSTSHDDFL EQMLSSCSWT DLNHNKPLLW DPNTPNDIKP
101: PDETTPSNNN DDATANVVFP SFDEHSTLAS KFRNHQISPN NAPKNAAAAA FMLQHQLLRD SGLLNMPLSL PGNDVVDASS FKSPNPGGEA SVQALYNGFA
201: GSLHGAGQSS NQTQHFQNPQ GSSNPMQGQN FGAAPAGGGG ATNQAPGSGA AAGGAPAQPR QRVRARRGQA TDPHSIAERL RRERIAERMK ALQELVPNAN
301: KTDKASMLDE IIDYVKFLQL QVKVLSMSRL GGAAAVAPLV ADMYSEGGGD CIQANGNSNG GGAHAPNSNT NQTSATTPSN DSLTMTEHQV AKLMEEDMGS
401: AMQYLQGKGL CLMPISLATA ISTATCHTRN VTVNVNPLIN AAAAAQIPTA ANPAGDGPSS PSMSVLTVQS AVAVNDGSAA VKDAASVSKP

Best Arabidopsis Sequence Match ( AT2G24260.1 )
(BLAST)

001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA

Arabidopsis Description

BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.