CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90443	Soybean	nucleus	91.17	87.26
KRH05051	Soybean	nucleus	50.07	86.5
KRH68390	Soybean	nucleus	47.47	52.56
KRG96663	Soybean	nucleus	47.47	51.82
KRH71636	Soybean	golgi, plasma membrane, vacuole	11.43	51.63
KRH04711	Soybean	plastid	8.68	37.5
KRH72281	Soybean	nucleus, plastid	6.51	36.0
KRH76132	Soybean	nucleus	8.83	33.33
KRH69138	Soybean	cytosol, nucleus, vacuole	8.54	32.78
GSMUA_Achr1P19000_001	Banana	mitochondrion, nucleus	27.35	31.87
Zm00001d040536_P005	Maize	nucleus	26.05	31.75
KRH04595	Soybean	nucleus	12.3	31.25
KXG32305	Sorghum	nucleus	27.06	30.96
TraesCS1D01G084200.1	Wheat	nucleus	22.14	30.48
KRH55381	Soybean	cytosol	3.04	30.43
HORVU1Hr1G017900.1	Barley	nucleus	21.71	30.43
TraesCS1B01G100400.2	Wheat	nucleus	22.0	30.28
KRH19683	Soybean	nucleus	22.29	30.26
KRH32290	Soybean	nucleus	21.42	30.14
TraesCS1A01G083000.1	Wheat	nucleus	22.0	29.98
Zm00001d024783_P001	Maize	nucleus	21.56	29.5
Os01t0286100-01	Rice	nucleus	26.92	29.2
Zm00001d008205_P001	Maize	nucleus	26.92	29.15
Os05t0139100-01	Rice	nucleus	20.84	28.51
KRH67519	Soybean	nucleus	20.69	28.49
KRH28453	Soybean	nucleus	11.58	27.49
KRH68348	Soybean	nucleus	20.55	27.47
KRH77016	Soybean	nucleus	14.76	27.2
KRH33663	Soybean	nucleus	17.51	26.95
KRH05665	Soybean	nucleus	11.58	26.94
KRH15381	Soybean	nucleus	11.58	26.94
KRG96615	Soybean	nucleus	19.97	26.64
KRH45975	Soybean	nucleus	19.39	25.52
KRG99030	Soybean	nucleus	19.39	24.5
KRH54630	Soybean	nucleus	14.04	24.13
KRH71345	Soybean	nucleus	5.93	23.16
KRH14535	Soybean	nucleus	18.52	22.78
KRH75301	Soybean	nucleus	14.62	22.05
KXG21255	Sorghum	nucleus	21.85	21.95
KRG88937	Soybean	nucleus	14.62	21.72
KRH73584	Soybean	nucleus	17.22	21.17
KRH65412	Soybean	nucleus	11.87	20.65
KRH03075	Soybean	nucleus	10.42	19.62
KRH32094	Soybean	nucleus	7.81	19.08
KRG95612	Soybean	nucleus	7.96	18.84
KRH67287	Soybean	nucleus	7.81	18.49
KRG92679	Soybean	nucleus	8.39	17.47
KRH34087	Soybean	nucleus	8.1	17.07
KRH37912	Soybean	nucleus	11.29	15.92
KRH12909	Soybean	nucleus	10.85	15.79
KRH71344	Soybean	cytosol	1.01	9.33

Protein Annotations

EntrezGene:100820151	MapMan:15.5.32	MapMan:26.1.1.4	Gene3D:4.10.280.10	EMBL:ACUP02006552	EnsemblPlantsGene:GLYMA_10G142600
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	UniProt:I1LAY5
InterPro:IPR011598	InterPro:IPR036638	ProteinID:KRH33732.1	EnsemblPlants:KRH33733	ProteinID:KRH33733	ProteinID:KRH33733.1
ProteinID:KRH33734.1	EMBL:KT031131	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF284
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000211CF5B	InterPro:bHLH_dom	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:37701391..37706328

Molecular Weight (calculated)

74154.8 Da

IEP (calculated)

6.889

GRAVY (calculated)

-0.695

Length

691 amino acids

Sequence
(BLAST)

001: MPLYELYRLA REKLGKETTS TRAPDQCSSP ENDFFELVWE NGQISSQGQS SRVRRSPSCK SLPSHCLPSH SPKARDKDVG YGSYTRLGKF GDLDSGLNEI
101: PMSVPSSEVD FCQDEDVLPW LDYPSIDGSL QQEYGSDFLP ASNSFTLLDK KSNGNMAFRD SQKTSEEQGN VFKGSSAGQV ETARPKASST SQLFPPSLHQ
201: CQTSFVSSRS RASDITENNN TSNANQDASY GKITHILSSS SDFSNAKVQK CDPPMNSNGS SSTIMNFSHF ARPAAMVRAN LHSIGLKSGL SSSRSDSMEM
301: KNKGAAATSS NPPESILVDS SVECLKEPII QCQQVVEQSK ADVNSLLPKS VEQNAVPSKQ SEPAGKESAA KIDLIPNQVP GDNGTKGQTA AEKSKEPAVA
401: SSSVCSGNGT DQGSEEPNQN LKRKRKDTDD SECHSEDVEE ESAGAKKTAG GRGGAGSKRS RAAEVHNLSE RKRRDRINEK MRALQELIPN CNKVDKASML
501: DEAIEYLKTL QLQVQIMSMG AGLYMPPMML PAGMQHMHAP HMAPFSPMGV GMHMGYGMGY GMGMPDMNGG SSRFPMIQVP QMQGTHIPVA HMSGSTAFHG
601: MARANPPGFG LPGQGHPMPM PRAPMFPFSG GQMPNVDPQV KQSTGGRDST SQMPTQCEAA AVGFEQSTLA HNNGHATKAN DNGSVNPGPG R

Best Arabidopsis Sequence Match ( AT1G09530.1 )
(BLAST)

001: MPLFELFRLT KAKLESAQDR NPSPPVDEVV ELVWENGQIS TQSQSSRSRN IPPPQANSSR AREIGNGSKT TMVDEIPMSV PSLMTGLSQD DDFVPWLNHH
101: PSLDGYCSDF LRDVSSPVTV NEQESDMAVN QTAFPLFQRR KDGNESAPAA SSSQYNGFQS HSLYGSDRAR DLPSQQTNPD RFTQTQEPLI TSNKPSLVNF
201: SHFLRPATFA KTTNNNLHDT KEKSPQSPPN VFQTRVLGAK DSEDKVLNES VASATPKDNQ KACLISEDSC RKDQESEKAV VCSSVGSGNS LDGPSESPSL
301: SLKRKHSNIQ DIDCHSEDVE EESGDGRKEA GPSRTGLGSK RSRSAEVHNL SERRRRDRIN EKMRALQELI PNCNKVDKAS MLDEAIEYLK SLQLQVQIMS
401: MASGYYLPPA VMFPPGMGHY PAAAAAMAMG MGMPYAMGLP DLSRGGSSVN HGPQFQVSGM QQQPVAMGIP RVSGGGIFAG SSTIGNGSTR DLSGSKDQTT
501: TNNNSNLKPI KRKQGSSDQF CGSS

Arabidopsis Description

PIF3Transcription factor PIF3 [Source:UniProtKB/Swiss-Prot;Acc:O80536]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.