CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33733	Soybean	nucleus	87.26	91.17
KRH05051	Soybean	nucleus	46.12	83.25
KRG96663	Soybean	nucleus	47.78	54.5
KRH68390	Soybean	nucleus	47.09	54.49
KRH71636	Soybean	golgi, plasma membrane, vacuole	10.94	51.63
KRH04711	Soybean	plastid	8.45	38.12
KRH72281	Soybean	nucleus, plastid	5.96	34.4
KRH76132	Soybean	nucleus	8.59	33.88
GSMUA_Achr1P19000_001	Banana	mitochondrion, nucleus	26.59	32.38
KRH69138	Soybean	cytosol, nucleus, vacuole	8.03	32.22
KRH04595	Soybean	nucleus	12.05	31.99
Zm00001d040536_P005	Maize	nucleus	25.07	31.92
KXG32305	Sorghum	nucleus	26.32	31.46
KRH19683	Soybean	nucleus	21.61	30.65
HORVU1Hr1G017900.1	Barley	nucleus	20.91	30.63
KRH55381	Soybean	cytosol	2.91	30.43
KRH32290	Soybean	nucleus	20.64	30.35
Zm00001d024783_P001	Maize	nucleus	21.19	30.3
TraesCS1D01G084200.1	Wheat	nucleus	21.05	30.28
TraesCS1B01G100400.2	Wheat	nucleus	21.05	30.28
Os01t0286100-01	Rice	nucleus	26.59	30.14
TraesCS1A01G083000.1	Wheat	nucleus	21.05	29.98
Zm00001d008205_P001	Maize	nucleus	26.18	29.62
KRH67519	Soybean	nucleus	20.5	29.48
Os05t0139100-01	Rice	nucleus	20.5	29.31
KRH28453	Soybean	nucleus	11.36	28.18
KRH15381	Soybean	nucleus	11.22	27.27
KRH05665	Soybean	nucleus	11.22	27.27
KRH68348	Soybean	nucleus	19.39	27.08
KRH77016	Soybean	nucleus	13.99	26.93
KRH33663	Soybean	nucleus	16.48	26.5
KRG96615	Soybean	nucleus	18.84	26.25
KRH45975	Soybean	nucleus	18.98	26.1
KRG99030	Soybean	nucleus	18.98	25.05
KRH54630	Soybean	nucleus	13.71	24.63
KRH71345	Soybean	nucleus	5.82	23.73
KRH14535	Soybean	nucleus	18.14	23.31
KXG21255	Sorghum	nucleus	21.33	22.38
KRH75301	Soybean	nucleus	14.13	22.27
KRH73584	Soybean	nucleus	17.31	22.24
KRG88937	Soybean	nucleus	14.27	22.15
KRH65412	Soybean	nucleus	11.63	21.16
KRH32094	Soybean	nucleus	7.76	19.79
KRH03075	Soybean	nucleus	9.83	19.35
KRG95612	Soybean	nucleus	7.76	19.18
KRH67287	Soybean	nucleus	7.62	18.84
KRG92679	Soybean	nucleus	7.76	16.87
KRH34087	Soybean	nucleus	7.48	16.46
KRH37912	Soybean	nucleus	10.66	15.71
KRH12909	Soybean	nucleus	10.25	15.58
KRH71344	Soybean	cytosol	1.11	10.67

Protein Annotations

EntrezGene:100794974	MapMan:15.5.32	MapMan:26.1.1.4	Gene3D:4.10.280.10	EMBL:ACUP02012620	EnsemblPlantsGene:GLYMA_20G091200
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	UniProt:K7N2G1	EnsemblPlants:KRG90443	ProteinID:KRG90443	ProteinID:KRG90443.1	EMBL:KT031132
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF284	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI000294B77A	InterPro:bHLH_dom	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:33450394..33455336

Molecular Weight (calculated)

77252.2 Da

IEP (calculated)

6.361

GRAVY (calculated)

-0.670

Length

722 amino acids

Sequence
(BLAST)

001: MPLYELYRLA REKLGKETTS TRAPDLCSSP ENDFFELVWE NGQISSQGQS SRVRRSPSCK SLPSHCLPSH CPKVRDKDVG YGTNTRMGKF GDLDSGLNEI
101: PMSVPSREVD FCHDEDVLPW LDYTSMDGSL QHEYGSDFLH ASNSFTLLDK KSNGNMAFRD SHKTSEEQGN VFKGSSAEQV ETARPKASTS QLFPPSLHQC
201: QTSFVSSRSR ASDITENNNT SNANQDVSYG EITHILSSSS DLSSAKVQKC DPPITSNGSS STIMNFSHFA RPAAMVRANL QNIGLKSGLS SARSDSMEIK
301: NKGAAATSSN PPESILVDSS GECSKEPTMQ CQQVVEQSKP DVNSLQPKSV EQNAVPSKQS EPASKESATK IDQTPNQVLG DSGTKGQTAA EKSMEPAVAS
401: SSVCSGTGAD QGSDEPNQNL KRKTKDTDDS ECHSEDVEEE SAGAKKTAGG QGGAGSKRSR AAEVHNLSER RRRDRINEKM RALQELIPNC NKVDKASMLD
501: EAIEYLKTLQ LQVQIMSMGA GLYMPPMMLP AGMQHMHAPH MAPFSPMGVG MHMGYGMGYG MGMPDMNGGS SRFPMIQVPQ MQGTHIPVAH MSGPTALHGM
601: ARSNPPGYGL PGQGYPMHMP PASVFPFSGG PLMNSPAQGL HARGSSGLVE TVDSASASGL KDQMQNVDPQ VKQSTGGCDS TSQMPTQCEA AAVGFEQSAL
701: AHSRGHASKA NDNGAVNPDP GR

Best Arabidopsis Sequence Match ( AT1G09530.3 )
(BLAST)

001: MPLFELFRLT KAKLESAQDR NPSPPVDEVV ELVWENGQIS TQSQSSRSRN IPPPQANSSR AREIGNGSKT TMVDEIPMSV PSLMTGLSQD DDFVPWLNHH
101: PSLDGYCSDF LRDVSSPVTV NEQESDMAVN QTAFPLFQRR KDGNESAPAA SSSQYNGFQS HSLYGSDRAR DLPSQQTNPD RFTQTQEPLI TSNKPSLVNF
201: SHFLRPATFA KTTNNNLHDT KEKSPQSPPN VFQTRVLGAK DSEDKVLNES VASATPKDNQ KACLISEDSC RKDQESEKAV VCSSVGSGNS LDGPSESPSL
301: SLKRKHSNIQ DIDCHSEDVE EESGDGRKEA GPSRTGLGSK RSRSAEVHNL SERRRRDRIN EKMRALQELI PNCNKVDKAS MLDEAIEYLK SLQLQVQIMS
401: MASGYYLPPA VMFPPGMGHY PAAAAAMAMG MGMPYAMGLP DLSRGGSSVN HGPQFQVSGM QQQPVAMGIP RVSGGGIFAG SSTIGNGSTR DLSGSKDQTT
501: TNNNSNLKPI KRKQGSSDQF CGSS

Arabidopsis Description

PIF3Transcription factor PIF3 [Source:UniProtKB/Swiss-Prot;Acc:O80536]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.