Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g06930.t01 | Wine grape | nucleus | 48.76 | 46.34 |
| KRH76132 | Soybean | nucleus | 20.4 | 44.81 |
| Solyc03g115540.1.1 | Tomato | nucleus | 43.03 | 39.41 |
| PGSC0003DMT400063117 | Potato | nucleus | 42.29 | 38.9 |
| KRH71636 | Soybean | golgi, plasma membrane, vacuole | 14.43 | 37.91 |
| PGSC0003DMT400083164 | Potato | nucleus | 38.81 | 37.5 |
| Solyc06g069600.1.1 | Tomato | nucleus | 38.06 | 36.96 |
| KRG88937 | Soybean | nucleus | 35.32 | 30.54 |
| KRH75301 | Soybean | nucleus | 34.58 | 30.35 |
| KRH72281 | Soybean | nucleus, plastid | 8.71 | 28.0 |
| KRH04711 | Soybean | plastid | 10.95 | 27.5 |
| KRH65412 | Soybean | nucleus | 25.87 | 26.2 |
| KRH55381 | Soybean | cytosol | 4.23 | 24.64 |
| KRH69138 | Soybean | cytosol, nucleus, vacuole | 10.2 | 22.78 |
| KRH04595 | Soybean | nucleus | 14.93 | 22.06 |
| KRH28453 | Soybean | nucleus | 15.17 | 20.96 |
| KRH05665 | Soybean | nucleus | 14.93 | 20.2 |
| KRH15381 | Soybean | nucleus | 14.43 | 19.53 |
| KRH67519 | Soybean | nucleus | 24.38 | 19.52 |
| KRH19683 | Soybean | nucleus | 23.63 | 18.66 |
| KRH32290 | Soybean | nucleus | 22.64 | 18.53 |
| KRH77016 | Soybean | nucleus | 17.16 | 18.4 |
| KRH33663 | Soybean | nucleus | 20.15 | 18.04 |
| KRH71345 | Soybean | nucleus | 7.21 | 16.38 |
| KRH45975 | Soybean | nucleus | 21.39 | 16.38 |
| KRG99030 | Soybean | nucleus | 21.89 | 16.09 |
| KRH73584 | Soybean | nucleus | 21.39 | 15.3 |
| KRH14535 | Soybean | nucleus | 21.14 | 15.12 |
| KRH33733 | Soybean | nucleus | 24.13 | 14.04 |
| KRG90443 | Soybean | nucleus | 24.63 | 13.71 |
| KRH68390 | Soybean | nucleus | 21.14 | 13.62 |
| KRH32094 | Soybean | nucleus | 9.45 | 13.43 |
| KRH03075 | Soybean | nucleus | 12.19 | 13.35 |
| KRG96663 | Soybean | nucleus | 20.9 | 13.27 |
| KRH68348 | Soybean | nucleus | 16.92 | 13.15 |
| KRG95612 | Soybean | nucleus | 9.45 | 13.01 |
| KRH67287 | Soybean | nucleus | 9.2 | 12.67 |
| KRG96615 | Soybean | nucleus | 16.17 | 12.55 |
| KRG92679 | Soybean | nucleus | 10.2 | 12.35 |
| KRH34087 | Soybean | nucleus | 9.95 | 12.2 |
| KRH37912 | Soybean | nucleus | 13.43 | 11.02 |
| KRH12909 | Soybean | nucleus | 12.94 | 10.95 |
| KRH05051 | Soybean | nucleus | 8.21 | 8.25 |
| KRH71344 | Soybean | cytosol | 1.49 | 8.0 |
Protein Annotations
| EntrezGene:102667566 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02003555 | ncoils:Coil | EnsemblPlantsGene:GLYMA_06G199600 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:K7KW24 | EnsemblPlants:KRH54630 | ProteinID:KRH54630 | ProteinID:KRH54630.1 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF285 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000295C338 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:18231527..18237683
Molecular Weight (calculated)
43993.5 Da
IEP (calculated)
8.379
GRAVY (calculated)
-0.544
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPVSMSNYD RISELIWENG QLSIHGLGGL QPTNPTQEKP ISSGAHDTLE SIVQHATFQR YQPSKFTREE GHAPTSNSKN NNSIGAPYYG GEVQGVLSST
101: RKRTWSNANN SMLEECDILS GCASAGATFC RDNDTTMMTW VSLDQSGRSL KTMEEDSACH CGSEIRDNQD DRDSKAEVGQ SNSKRRSRTA AIHNQSERKR
201: RDRINQKMKA LQRLVPNANK TDKASMLDEV INYLKQLQAQ IQMMNMTSMP QMMVPLAMQQ QLQMSMLARM GVAGLGMGMG MNMAAAAQTA GGPIRSLPQF
301: IQPTTTTVCA PPPATAPVFV APSFMMPPSM IQAPPKPQQL PASSASIASI HLPHPYSAAG LTQPINMDIL SNMAALYQQQ ISQNNHQALS SSMPQPHHEQ
401: GR
101: RKRTWSNANN SMLEECDILS GCASAGATFC RDNDTTMMTW VSLDQSGRSL KTMEEDSACH CGSEIRDNQD DRDSKAEVGQ SNSKRRSRTA AIHNQSERKR
201: RDRINQKMKA LQRLVPNANK TDKASMLDEV INYLKQLQAQ IQMMNMTSMP QMMVPLAMQQ QLQMSMLARM GVAGLGMGMG MNMAAAAQTA GGPIRSLPQF
301: IQPTTTTVCA PPPATAPVFV APSFMMPPSM IQAPPKPQQL PASSASIASI HLPHPYSAAG LTQPINMDIL SNMAALYQQQ ISQNNHQALS SSMPQPHHEQ
401: GR
001: MSNYGVKELT WENGQLTVHG LGDEVEPTTS NNPIWTQSLN GCETLESVVH QAALQQPSKF QLQSPNGPNH NYESKDGSCS RKRGYPQEMD RWFAVQEESH
101: RVGHSVTASA SGTNMSWASF ESGRSLKTAR TGDRDYFRSG SETQDTEGDE QETRGEAGRS NGRRGRAAAI HNESERRRRD RINQRMRTLQ KLLPTASKAD
201: KVSILDDVIE HLKQLQAQVQ FMSLRANLPQ QMMIPQLPPP QSVLSIQHQQ QQQQQQQQQQ QQQQQFQMSL LATMARMGMG GGGNGYGGLV PPPPPPPMMV
301: PPMGNRDCTN GSSATLSDPY SAFFAQTMNM DLYNKMAAAI YRQQSDQTTK VNIGMPSSSS NHEKRD
101: RVGHSVTASA SGTNMSWASF ESGRSLKTAR TGDRDYFRSG SETQDTEGDE QETRGEAGRS NGRRGRAAAI HNESERRRRD RINQRMRTLQ KLLPTASKAD
201: KVSILDDVIE HLKQLQAQVQ FMSLRANLPQ QMMIPQLPPP QSVLSIQHQQ QQQQQQQQQQ QQQQQFQMSL LATMARMGMG GGGNGYGGLV PPPPPPPMMV
301: PPMGNRDCTN GSSATLSDPY SAFFAQTMNM DLYNKMAAAI YRQQSDQTTK VNIGMPSSSS NHEKRD
Arabidopsis Description
BHLH72Transcription factor PIF7 [Source:UniProtKB/Swiss-Prot;Acc:Q570R7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.