Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72281 | Soybean | nucleus, plastid | 23.16 | 68.0 |
| KRH37912 | Soybean | nucleus | 72.75 | 54.49 |
| KRH55381 | Soybean | cytosol | 10.08 | 53.62 |
| KRH12909 | Soybean | nucleus | 68.94 | 53.26 |
| KRH32094 | Soybean | nucleus | 35.42 | 45.94 |
| KRH71344 | Soybean | cytosol | 9.26 | 45.33 |
| KRG95612 | Soybean | nucleus | 35.69 | 44.86 |
| KRH67287 | Soybean | nucleus | 35.42 | 44.52 |
| KRH71345 | Soybean | nucleus | 20.71 | 42.94 |
| KRH34087 | Soybean | nucleus | 36.51 | 40.85 |
| KRG92679 | Soybean | nucleus | 36.51 | 40.36 |
| KRH71636 | Soybean | golgi, plasma membrane, vacuole | 13.35 | 32.03 |
| KRH04711 | Soybean | plastid | 12.26 | 28.12 |
| KRH76132 | Soybean | nucleus | 13.08 | 26.23 |
| KRH69138 | Soybean | cytosol, nucleus, vacuole | 9.81 | 20.0 |
| KRH05665 | Soybean | nucleus | 14.99 | 18.52 |
| KRH15381 | Soybean | nucleus | 14.99 | 18.52 |
| KRH04595 | Soybean | nucleus | 12.81 | 17.28 |
| KRH28453 | Soybean | nucleus | 13.62 | 17.18 |
| KRH77016 | Soybean | nucleus | 16.35 | 16.0 |
| KRH65412 | Soybean | nucleus | 15.53 | 14.36 |
| KRH32290 | Soybean | nucleus | 19.07 | 14.26 |
| KRH67519 | Soybean | nucleus | 18.8 | 13.74 |
| KRH19683 | Soybean | nucleus | 18.53 | 13.36 |
| KRH45975 | Soybean | nucleus | 18.26 | 12.76 |
| KRH33663 | Soybean | nucleus | 15.26 | 12.47 |
| KRG88937 | Soybean | nucleus | 15.53 | 12.26 |
| KRG99030 | Soybean | nucleus | 18.26 | 12.25 |
| KRH75301 | Soybean | nucleus | 15.26 | 12.23 |
| KRH54630 | Soybean | nucleus | 13.35 | 12.19 |
| KRH68348 | Soybean | nucleus | 16.35 | 11.61 |
| KRH73584 | Soybean | nucleus | 17.71 | 11.57 |
| KRH14535 | Soybean | nucleus | 17.17 | 11.21 |
| KRG96615 | Soybean | nucleus | 14.71 | 10.42 |
| KRH33733 | Soybean | nucleus | 19.62 | 10.42 |
| KRG90443 | Soybean | nucleus | 19.35 | 9.83 |
| KRH68390 | Soybean | nucleus | 14.71 | 8.65 |
| KRG96663 | Soybean | nucleus | 14.17 | 8.21 |
| KRH05051 | Soybean | nucleus | 5.99 | 5.5 |
Protein Annotations
| EntrezGene:100801457 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A0R0FIC8 | EMBL:ACUP02010335 | ncoils:Coil |
| InterPro:DOC_1/2 | EnsemblPlantsGene:GLYMA_17G075200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH03075 | ProteinID:KRH03075 | ProteinID:KRH03075.1 |
| PFAM:PF00010 | PFAM:PF09806 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF28 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0006EDC3F0 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr17:-:5901742..5905201
Molecular Weight (calculated)
39552.6 Da
IEP (calculated)
7.142
GRAVY (calculated)
-0.458
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPCSREMQG PNTTNSLFNN NTTCSNQPQI HFDTTSNDDF LKQMLSNLPS SSWTLDQTTP DNNVVFPYDV EHANLASKFR NHQITTDNDK ASALMLHHHL
101: LLSSSAAAAN SQLLHMPFDS SAPNDVVDAP SFKSLTPNGE PASVQALYNG FSGSLQPNNQ THHFQQHPQP QVQVQSFGAS APANGGGSGQ PKQRVRARRG
201: QATDPHSIAE RLRRERIAER MKALQELVPN ANKTDKASML DEIIDYVKFL QLQVKVLSMS RLGGAAAVAP LVAEGGGDCI QAKRSNSNDS LAMTEQQVAK
301: LMEEDMGSAM QYLQGKGLCL MPISLASAIS KATCHPFING DGPSSPRMSA LTLANAVVKD AASVSKS
101: LLSSSAAAAN SQLLHMPFDS SAPNDVVDAP SFKSLTPNGE PASVQALYNG FSGSLQPNNQ THHFQQHPQP QVQVQSFGAS APANGGGSGQ PKQRVRARRG
201: QATDPHSIAE RLRRERIAER MKALQELVPN ANKTDKASML DEIIDYVKFL QLQVKVLSMS RLGGAAAVAP LVAEGGGDCI QAKRSNSNDS LAMTEQQVAK
301: LMEEDMGSAM QYLQGKGLCL MPISLASAIS KATCHPFING DGPSSPRMSA LTLANAVVKD AASVSKS
001: MSKSNPSNLK YYNLHPSFKH HKALNLKRHF NNIHFHSHSP PKKKKTEAMN SSSLLTPSSS PSPHLQSPAT FDHDDFLHHI FSSTPWPSSV LDDTPPPTSD
101: CAPVTGFHHH DADSRNQITM IPLSHNHPND ALFNGFSTGS LPFHLPQGSG GQTQTQSQAT ASATTGGATA QPQTKPKVRA RRGQATDPHS IAERLRRERI
201: AERMKSLQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL SMSRLGGAAS ASSQISEDAG GSHENTSSSG EAKMTEHQVA KLMEEDMGSA MQYLQGKGLC
301: LMPISLATTI STATCPSRSP FVKDTGVPLS PNLSTTIVAN GNGSSLVTVK DAPSVSKP
101: CAPVTGFHHH DADSRNQITM IPLSHNHPND ALFNGFSTGS LPFHLPQGSG GQTQTQSQAT ASATTGGATA QPQTKPKVRA RRGQATDPHS IAERLRRERI
201: AERMKSLQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL SMSRLGGAAS ASSQISEDAG GSHENTSSSG EAKMTEHQVA KLMEEDMGSA MQYLQGKGLC
301: LMPISLATTI STATCPSRSP FVKDTGVPLS PNLSTTIVAN GNGSSLVTVK DAPSVSKP
Arabidopsis Description
LRL2LJRHL1-like 2 [Source:TAIR;Acc:AT4G30980]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.