Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37912 | Soybean | nucleus | 91.37 | 88.57 |
| KRH03075 | Soybean | nucleus | 53.26 | 68.94 |
| PGSC0003DMT400020244 | Potato | nucleus | 51.16 | 63.61 |
| KRH72281 | Soybean | nucleus, plastid | 16.63 | 63.2 |
| Solyc12g010170.1.1 | Tomato | nucleus | 50.95 | 62.53 |
| VIT_11s0037g00040.t01 | Wine grape | nucleus | 66.11 | 62.3 |
| PGSC0003DMT400028917 | Potato | nucleus | 53.05 | 56.76 |
| Solyc07g005400.2.1 | Tomato | nucleus | 52.42 | 56.59 |
| KRH55381 | Soybean | cytosol | 8.21 | 56.52 |
| GSMUA_Achr4P01910_001 | Banana | nucleus | 49.68 | 52.56 |
| KRH71344 | Soybean | cytosol | 8.0 | 50.67 |
| KRH32094 | Soybean | nucleus | 29.47 | 49.47 |
| KRG95612 | Soybean | nucleus | 30.32 | 49.32 |
| KRH67287 | Soybean | nucleus | 29.68 | 48.29 |
| GSMUA_Achr3P04630_001 | Banana | nucleus | 49.26 | 47.95 |
| KRH71345 | Soybean | nucleus | 16.84 | 45.2 |
| KRH34087 | Soybean | nucleus | 30.53 | 44.21 |
| KRG92679 | Soybean | nucleus | 30.53 | 43.67 |
| KRH71636 | Soybean | golgi, plasma membrane, vacuole | 10.32 | 32.03 |
| KRH04711 | Soybean | plastid | 9.68 | 28.75 |
| KRH76132 | Soybean | nucleus | 10.11 | 26.23 |
| KRH69138 | Soybean | cytosol, nucleus, vacuole | 7.58 | 20.0 |
| KRH05665 | Soybean | nucleus | 12.0 | 19.19 |
| KRH15381 | Soybean | nucleus | 11.79 | 18.86 |
| KRH04595 | Soybean | nucleus | 10.74 | 18.75 |
| KRH28453 | Soybean | nucleus | 10.95 | 17.87 |
| KRH77016 | Soybean | nucleus | 13.68 | 17.33 |
| KRH32290 | Soybean | nucleus | 16.0 | 15.48 |
| KRH65412 | Soybean | nucleus | 12.42 | 14.86 |
| KRH67519 | Soybean | nucleus | 15.37 | 14.54 |
| KRH19683 | Soybean | nucleus | 15.58 | 14.54 |
| KRH45975 | Soybean | nucleus | 15.37 | 13.9 |
| KRG88937 | Soybean | nucleus | 13.47 | 13.76 |
| KRH75301 | Soybean | nucleus | 13.05 | 13.54 |
| KRG99030 | Soybean | nucleus | 15.37 | 13.35 |
| KRH68348 | Soybean | nucleus | 14.11 | 12.96 |
| KRH54630 | Soybean | nucleus | 10.95 | 12.94 |
| KRH73584 | Soybean | nucleus | 15.16 | 12.81 |
| KRH33663 | Soybean | nucleus | 12.0 | 12.69 |
| KRH14535 | Soybean | nucleus | 14.74 | 12.46 |
| KRG96615 | Soybean | nucleus | 13.26 | 12.16 |
| KRH33733 | Soybean | nucleus | 15.79 | 10.85 |
| KRG90443 | Soybean | nucleus | 15.58 | 10.25 |
| KRH68390 | Soybean | nucleus | 12.42 | 9.46 |
| KRG96663 | Soybean | nucleus | 12.0 | 9.0 |
| KRH05051 | Soybean | nucleus | 5.47 | 6.5 |
Protein Annotations
| EntrezGene:100806899 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02009427 | EnsemblPlantsGene:GLYMA_15G203900 | GO:GO:0001046 |
| GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | UniProt:I1MIE1 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH12909 |
| ProteinID:KRH12909 | ProteinID:KRH12909.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF28 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000233B5E5 | InterPro:bHLH_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr15:-:26404037..26408409
Molecular Weight (calculated)
49949.1 Da
IEP (calculated)
6.451
GRAVY (calculated)
-0.490
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPCSKEMQG LNSLLNSSSQ ISLQDLQNHT TNQIQNSHMN HQHQLAHFDS TSHDDFLEQM LSSCSWTDLN PNKPLLWDPN TLNDIKPPDE TTPSNNNNDA
101: TTNVASFSSF DEHSTLASKF RNHQISSNNN APKNAAAAAL MLQHQLLRDS GLLNMPLSLP GNDVVVDAST FESPNPSGKA SVQTFYNGFA GSLHGVGQSS
201: NQTQHFQHPQ GSSNPMQGQN FGAVPAGGGS ATNQAPASGA AAGGAPAQPR QRVRARRGQA TDPHSIAERL RRERIAERMK ALQELVPNAN KTDKASMLDE
301: IIDYVKFLQL QVKVLSMSRL GGAAAVAPLV ADMSSEGGGD CIQANGKSNG GGAQASTTNT NTNQTTATTT SNDSLTMTEH QVAKLMEEDM GSAMQYLQGK
401: GLCLMPISLA TAISTATCPT RNVNVNPLIN AAAGATHFPT AANPAGEGPS SPSMSVLTVQ SAIAGNDGAA SVSKP
101: TTNVASFSSF DEHSTLASKF RNHQISSNNN APKNAAAAAL MLQHQLLRDS GLLNMPLSLP GNDVVVDAST FESPNPSGKA SVQTFYNGFA GSLHGVGQSS
201: NQTQHFQHPQ GSSNPMQGQN FGAVPAGGGS ATNQAPASGA AAGGAPAQPR QRVRARRGQA TDPHSIAERL RRERIAERMK ALQELVPNAN KTDKASMLDE
301: IIDYVKFLQL QVKVLSMSRL GGAAAVAPLV ADMSSEGGGD CIQANGKSNG GGAQASTTNT NTNQTTATTT SNDSLTMTEH QVAKLMEEDM GSAMQYLQGK
401: GLCLMPISLA TAISTATCPT RNVNVNPLIN AAAGATHFPT AANPAGEGPS SPSMSVLTVQ SAIAGNDGAA SVSKP
001: MENGNGEGKG EFINQNNDFF LDSMSMLSSL PPCWDPSLPP PPPPPQSLFH ALAVDAPFPD QFHHPQESGG PTMGSQEGLQ PQGTVSTTSA PVVRQKPRVR
101: ARRGQATDPH SIAERLRRER IAERMKSLQE LVPNTNKTDK ASMLDEIIEY VRFLQLQVKV LSMSRLGGAG SVGPRLNGLS AEAGGRLNAL TAPCNGLNGN
201: GNATGSSNES LRSTEQRVAK LMEEDMGSAM QYLQGKGLCL MPISLATAIS SSTTHSRGSL FNPISSAVAA EDSNVTATAV AAPEASSTMD DVSASKA
101: ARRGQATDPH SIAERLRRER IAERMKSLQE LVPNTNKTDK ASMLDEIIEY VRFLQLQVKV LSMSRLGGAG SVGPRLNGLS AEAGGRLNAL TAPCNGLNGN
201: GNATGSSNES LRSTEQRVAK LMEEDMGSAM QYLQGKGLCL MPISLATAIS SSTTHSRGSL FNPISSAVAA EDSNVTATAV AAPEASSTMD DVSASKA
Arabidopsis Description
BHLH82LRL3 [Source:UniProtKB/TrEMBL;Acc:A0A178UI77]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.