Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G00050.1 | KRH39574 | AT1G32230.1 | 19548978 |
| AT4G00050.1 | KRH74370 | AT1G32230.1 | 19548978 |
| AT4G00050.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75301 | Soybean | nucleus | 91.61 | 93.01 |
| KRH76132 | Soybean | nucleus | 24.73 | 62.84 |
| VIT_15s0021g02690.t01 | Wine grape | nucleus | 61.51 | 61.51 |
| AT4G00050.1 | Thale cress | nucleus | 50.75 | 59.15 |
| CDX74328 | Canola | nucleus | 47.31 | 56.85 |
| Bra000560.1-P | Field mustard | nucleus | 46.88 | 56.19 |
| CDX83214 | Canola | nucleus | 41.94 | 56.03 |
| CDX91917 | Canola | nucleus | 41.51 | 55.62 |
| CDY21498 | Canola | nucleus | 46.02 | 55.3 |
| Solyc01g090790.2.1 | Tomato | nucleus | 54.84 | 54.96 |
| PGSC0003DMT400066807 | Potato | nucleus | 54.62 | 54.74 |
| CDY65390 | Canola | nucleus | 23.87 | 53.11 |
| Bra037312.1-P | Field mustard | nucleus | 23.87 | 53.11 |
| KRH65412 | Soybean | nucleus | 42.58 | 49.87 |
| KRH71636 | Soybean | golgi, plasma membrane, vacuole | 13.12 | 39.87 |
| Os10t0556200-01 | Rice | nucleus | 37.2 | 37.2 |
| TraesCS1B01G226200.2 | Wheat | nucleus | 36.13 | 36.92 |
| HORVU1Hr1G054260.3 | Barley | nucleus | 35.91 | 35.99 |
| TraesCS1D01G215600.2 | Wheat | nucleus | 35.05 | 35.82 |
| TraesCS1A01G212700.1 | Wheat | nucleus | 34.84 | 35.6 |
| KRH54630 | Soybean | nucleus | 30.54 | 35.32 |
| Zm00001d029898_P001 | Maize | nucleus | 36.13 | 34.29 |
| OQU92150 | Sorghum | nucleus | 37.63 | 32.59 |
| KRH72281 | Soybean | nucleus, plastid | 7.96 | 29.6 |
| KRH04711 | Soybean | plastid | 10.11 | 29.38 |
| KRH05665 | Soybean | nucleus | 16.56 | 25.93 |
| KRH15381 | Soybean | nucleus | 15.48 | 24.24 |
| KRH19683 | Soybean | nucleus | 25.38 | 23.18 |
| KRH28453 | Soybean | nucleus | 14.41 | 23.02 |
| KRH32290 | Soybean | nucleus | 24.3 | 23.01 |
| KRH69138 | Soybean | cytosol, nucleus, vacuole | 8.6 | 22.22 |
| KRH04595 | Soybean | nucleus | 12.9 | 22.06 |
| KRH67519 | Soybean | nucleus | 22.58 | 20.92 |
| KRH55381 | Soybean | cytosol | 3.01 | 20.29 |
| KRH77016 | Soybean | nucleus | 15.91 | 19.73 |
| KRH45975 | Soybean | nucleus | 21.08 | 18.67 |
| KRG99030 | Soybean | nucleus | 21.29 | 18.1 |
| KRH71345 | Soybean | nucleus | 6.88 | 18.08 |
| KRH73584 | Soybean | nucleus | 21.29 | 17.62 |
| KRH33663 | Soybean | nucleus | 16.77 | 17.37 |
| KRH14535 | Soybean | nucleus | 20.65 | 17.08 |
| KRH03075 | Soybean | nucleus | 12.26 | 15.53 |
| KRH32094 | Soybean | nucleus | 9.03 | 14.84 |
| KRH33733 | Soybean | nucleus | 21.72 | 14.62 |
| KRG95612 | Soybean | nucleus | 9.03 | 14.38 |
| KRG90443 | Soybean | nucleus | 22.15 | 14.27 |
| KRH67287 | Soybean | nucleus | 8.82 | 14.04 |
| KRH34087 | Soybean | nucleus | 9.89 | 14.02 |
| KRG92679 | Soybean | nucleus | 9.89 | 13.86 |
| KRH12909 | Soybean | nucleus | 13.76 | 13.47 |
| KRH68390 | Soybean | nucleus | 18.06 | 13.46 |
| KRG96663 | Soybean | nucleus | 18.06 | 13.27 |
| KRH68348 | Soybean | nucleus | 14.62 | 13.15 |
| KRH37912 | Soybean | nucleus | 13.76 | 13.06 |
| KRG96615 | Soybean | nucleus | 14.19 | 12.74 |
| KRH71344 | Soybean | cytosol | 1.51 | 9.33 |
| KRH05051 | Soybean | nucleus | 7.53 | 8.75 |
Protein Annotations
| EntrezGene:100787929 | MapMan:15.5.32 | Gene3D:4.10.280.10 | ncoils:Coil | EnsemblPlantsGene:GLYMA_U014700 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | UniProt:I1LKI0 | InterPro:IPR011598 |
| InterPro:IPR036638 | EnsemblPlants:KRG88937 | ProteinID:KRG88937 | ProteinID:KRG88937.1 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF173 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000296348F | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chrscaffold_21:-:1986303..1993346
Molecular Weight (calculated)
49983.6 Da
IEP (calculated)
8.480
GRAVY (calculated)
-0.576
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQCVPSWDV EDNPPPSRVS LRSNSNSTAP DVPMLDYEVA ELTWENGQLS MHGLGLPRVP VKPPTAATNK YTWEKPRGSG TLESIVNQAT SFSHQEKPRP
101: LNGDSGGGGG VYGNFMVPWF DPHAAATTTT TTTNTMTMDA LVPCSNREQG KKKGMESGPG TCMVGCSTRV GSCCGGKGAK GHEASGRDQS VSGSATFGRD
201: SKHVTLDTCD REFGVAFTST SINSLENTSY AKHCTKTTTI EEHDSVSHSK PMGEDGDEEK KKRANGKSSV STKRSRAAAI HNQSERKRRD KINQRMKTLQ
301: KLVPNSSKTD KASMLDEVIE YLKQLQAQVQ MMNRINMSSM MLPLTMQQQL QMSMMSPMGM GLGMGMGMGM GMGMDMNSMN RANIPGIPPV LHPSAFMPMA
401: ASWDAAVAAA AGGGDRLQGT PASVMPDPLS TIFGCQSQPM TMDAYSRLAA MYQQLHQPPT SGSKN
101: LNGDSGGGGG VYGNFMVPWF DPHAAATTTT TTTNTMTMDA LVPCSNREQG KKKGMESGPG TCMVGCSTRV GSCCGGKGAK GHEASGRDQS VSGSATFGRD
201: SKHVTLDTCD REFGVAFTST SINSLENTSY AKHCTKTTTI EEHDSVSHSK PMGEDGDEEK KKRANGKSSV STKRSRAAAI HNQSERKRRD KINQRMKTLQ
301: KLVPNSSKTD KASMLDEVIE YLKQLQAQVQ MMNRINMSSM MLPLTMQQQL QMSMMSPMGM GLGMGMGMGM GMGMDMNSMN RANIPGIPPV LHPSAFMPMA
401: ASWDAAVAAA AGGGDRLQGT PASVMPDPLS TIFGCQSQPM TMDAYSRLAA MYQQLHQPPT SGSKN
001: MSQCVPNCHI DDTPAAATTT VRSTTAADIP ILDYEVAELT WENGQLGLHG LGPPRVTASS TKYSTGAGGT LESIVDQATR LPNPKPTDEL VPWFHHRSSR
101: AAMAMDALVP CSNLVHEQQS KPGGVGSTRV GSCSDGRTMG GGKRARVAPE WSGGGSQRLT MDTYDVGFTS TSMGSHDNTI DDHDSVCHSR PQMEDEEEKK
201: AGGKSSVSTK RSRAAAIHNQ SERKRRDKIN QRMKTLQKLV PNSSKTDKAS MLDEVIEYLK QLQAQVSMMS RMNMPSMMLP MAMQQQQQLQ MSLMSNPMGL
301: GMGMGMPGLG LLDLNSMNRA AASAPNIHAN MMPNPFLPMN CPSWDASSND SRFQSPLIPD PMSAFLACST QPTTMEAYSR MATLYQQMQQ QLPPPSNPK
101: AAMAMDALVP CSNLVHEQQS KPGGVGSTRV GSCSDGRTMG GGKRARVAPE WSGGGSQRLT MDTYDVGFTS TSMGSHDNTI DDHDSVCHSR PQMEDEEEKK
201: AGGKSSVSTK RSRAAAIHNQ SERKRRDKIN QRMKTLQKLV PNSSKTDKAS MLDEVIEYLK QLQAQVSMMS RMNMPSMMLP MAMQQQQQLQ MSLMSNPMGL
301: GMGMGMPGLG LLDLNSMNRA AASAPNIHAN MMPNPFLPMN CPSWDASSND SRFQSPLIPD PMSAFLACST QPTTMEAYSR MATLYQQMQQ QLPPPSNPK
Arabidopsis Description
UNE10Transcription factor UNE10 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ38]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.