Factsheet for Solyc01g090790.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400066807	Potato	nucleus	94.18	94.18
VIT_15s0021g02690.t01	Wine grape	nucleus	57.33	57.2
KRH75301	Soybean	nucleus	55.17	55.9
KRG88937	Soybean	nucleus	54.96	54.84
Solyc10g018510.1.1	Tomato	nucleus	39.22	46.55
TraesCS1B01G226200.2	Wheat	nucleus	35.56	36.26
HORVU1Hr1G054260.3	Barley	nucleus	35.78	35.78
Os10t0556200-01	Rice	nucleus	35.78	35.7
TraesCS1D01G215600.2	Wheat	nucleus	34.91	35.6
TraesCS1A01G212700.1	Wheat	nucleus	34.7	35.38
Zm00001d029898_P001	Maize	nucleus	36.85	34.9
OQU92150	Sorghum	nucleus	38.15	32.96
Solyc03g115540.1.1	Tomato	nucleus	31.03	32.8
Solyc06g069600.1.1	Tomato	nucleus	25.0	28.02
Solyc04g078690.2.1	Tomato	nucleus	15.3	22.61
Solyc04g007430.1.1	Tomato	nucleus	8.84	22.28
Solyc09g063010.2.1	Tomato	nucleus	24.35	20.29
Solyc02g093280.2.1	Tomato	nucleus	15.95	19.58
Solyc06g008030.2.1	Tomato	nucleus	21.12	19.14
Solyc07g043580.2.1	Tomato	nucleus	18.32	17.17
Solyc09g083220.2.1	Tomato	nucleus	10.34	15.79
Solyc09g065820.2.1	Tomato	nucleus	9.91	15.23
Solyc03g005350.2.1	Tomato	nucleus	9.7	15.2
Solyc12g010170.1.1	Tomato	nucleus	12.5	14.99
Solyc07g005400.2.1	Tomato	nucleus	13.79	14.55
Solyc01g102300.2.1	Tomato	nucleus	21.77	14.13

Protein Annotations

EnsemblPlants:Solyc01g090790.2.1	EnsemblPlantsGene:Solyc01g090790.2	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR12565	PANTHER:PTHR12565:SF173	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002767E1A	UniProt:K4AZ20	MapMan:15.5.32	:	:

Description

No Description!

Coordinates

chr1:-:84467589..84472264

Molecular Weight (calculated)

50617.5 Da

IEP (calculated)

7.079

GRAVY (calculated)

-0.682

Length

464 amino acids

Sequence
(BLAST)

001: MNQCVPSWDL DDSTVPRKNL IQTQSNSLAV DVPSLDYEVA ELTWENGQLA MHGLGPPRAN NKPISSYGGT LESIVNQATR CNDDVPLHLH GKSTVDRNKQ
101: SGDEVVPWFN NHNAVAYAPP ATGLVAMTKD ALVPCSRNTS NSDNQRSVHV PGIDGSTHVG SCSGATNSRD WTVAPRMRVR PTRREWSSRA DMISVSGSET
201: CGGDSRQLTV DTFDREFGTT MYTSTSMGSP ENTSSDKQCT NRTGDDHDSV CHSRDQKEGG DDEDDNDNKK GSKNSSSSTK RKRAAAIHNQ SERKRRDKIN
301: QRMKTLQKLV PNSSKTDKAS MLDEVIEYLK QLQAQVHMMS RMNMSPAMML PLAMQQQLQM SMMGMGMGMG MGMGVAGVFD INNLSRPNIP GLPSFLHPSA
401: AFMQPITSWD NSNSAPSPPS AAMPDPLAAL LACQSQPINM DAYSRMAALY LQFQQPPTGS GPKN

Best Arabidopsis Sequence Match ( AT4G00050.1 )
(BLAST)

001: MSQCVPNCHI DDTPAAATTT VRSTTAADIP ILDYEVAELT WENGQLGLHG LGPPRVTASS TKYSTGAGGT LESIVDQATR LPNPKPTDEL VPWFHHRSSR
101: AAMAMDALVP CSNLVHEQQS KPGGVGSTRV GSCSDGRTMG GGKRARVAPE WSGGGSQRLT MDTYDVGFTS TSMGSHDNTI DDHDSVCHSR PQMEDEEEKK
201: AGGKSSVSTK RSRAAAIHNQ SERKRRDKIN QRMKTLQKLV PNSSKTDKAS MLDEVIEYLK QLQAQVSMMS RMNMPSMMLP MAMQQQQQLQ MSLMSNPMGL
301: GMGMGMPGLG LLDLNSMNRA AASAPNIHAN MMPNPFLPMN CPSWDASSND SRFQSPLIPD PMSAFLACST QPTTMEAYSR MATLYQQMQQ QLPPPSNPK

Arabidopsis Description

UNE10Transcription factor UNE10 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ38]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.