CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68390	Soybean	nucleus	84.68	85.9
KRG90443	Soybean	nucleus	54.5	47.78
KRH33733	Soybean	nucleus	51.82	47.47
KRH71636	Soybean	golgi, plasma membrane, vacuole	11.06	45.75
KRH05051	Soybean	nucleus	25.75	40.75
VIT_07s0005g02510.t01	Wine grape	nucleus	12.32	39.0
Bra020017.1-P	Field mustard	nucleus	28.91	37.04
CDY64745	Canola	nucleus	28.75	36.26
CDY22636	Canola	nucleus	27.96	36.05
CDX94963	Canola	nucleus	28.12	35.74
CDY06358	Canola	nucleus	27.33	35.23
KRH04711	Soybean	plastid	8.85	35.0
Bra031668.1-P	Field mustard	nucleus	27.17	34.96
AT1G09530.3	Thale cress	nucleus	28.91	34.92
PGSC0003DMT400047079	Potato	nucleus	36.49	32.63
Solyc01g102300.2.1	Tomato	nucleus	36.33	32.17
KRH69138	Soybean	cytosol, nucleus, vacuole	8.53	30.0
KRH72281	Soybean	nucleus, plastid	5.85	29.6
KRH04595	Soybean	nucleus	12.64	29.41
KRH76132	Soybean	nucleus	8.06	27.87
KRH55381	Soybean	cytosol	3.0	27.54
KRH05665	Soybean	nucleus	12.8	27.27
GSMUA_Achr1P19000_001	Banana	mitochondrion, nucleus	25.43	27.15
KRH15381	Soybean	nucleus	12.64	26.94
Zm00001d040536_P005	Maize	nucleus	24.01	26.81
Zm00001d024783_P001	Maize	nucleus	21.01	26.34
HORVU1Hr1G017900.1	Barley	nucleus	20.38	26.17
KXG32305	Sorghum	nucleus	24.96	26.16
TraesCS1B01G100400.2	Wheat	nucleus	20.7	26.1
Os01t0286100-01	Rice	nucleus	26.22	26.06
KRH33663	Soybean	nucleus	18.48	26.06
TraesCS1D01G084200.1	Wheat	nucleus	20.54	25.9
TraesCS1A01G083000.1	Wheat	nucleus	20.7	25.84
Os05t0139100-01	Rice	nucleus	20.54	25.74
KRH32290	Soybean	nucleus	19.75	25.46
KRH19683	Soybean	nucleus	20.22	25.15
KRH68348	Soybean	nucleus	19.75	24.18
Zm00001d008205_P001	Maize	nucleus	24.33	24.14
KRH28453	Soybean	nucleus	11.06	24.05
KRH45975	Soybean	nucleus	19.75	23.81
KRH67519	Soybean	nucleus	18.64	23.51
KRG96615	Soybean	nucleus	18.64	22.78
KRG99030	Soybean	nucleus	19.27	22.3
KRH14535	Soybean	nucleus	19.75	22.24
KRH77016	Soybean	nucleus	12.95	21.87
KRH73584	Soybean	nucleus	19.12	21.53
KRH71345	Soybean	nucleus	5.85	20.9
KRH54630	Soybean	nucleus	13.27	20.9
KXG21255	Sorghum	nucleus	22.12	20.35
KRH75301	Soybean	nucleus	13.74	19.0
KRG88937	Soybean	nucleus	13.27	18.06
KRH65412	Soybean	nucleus	11.22	17.88
KRH32094	Soybean	nucleus	6.95	15.55
KRG92679	Soybean	nucleus	7.9	15.06
KRH67287	Soybean	nucleus	6.79	14.73
KRG95612	Soybean	nucleus	6.79	14.73
KRH03075	Soybean	nucleus	8.21	14.17
KRH34087	Soybean	nucleus	7.27	14.02
KRH12909	Soybean	nucleus	9.0	12.0
KRH37912	Soybean	nucleus	8.85	11.43
KRH71344	Soybean	cytosol	0.79	6.67

Protein Annotations

EntrezGene:102659557	MapMan:15.5.32	MapMan:26.1.1.4	Gene3D:4.10.280.10	EMBL:ACUP02012162	ncoils:Coil
EnsemblPlantsGene:GLYMA_19G224700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	UniProt:K7MZQ4	ProteinID:KRG96662.1	EnsemblPlants:KRG96663	ProteinID:KRG96663
ProteinID:KRG96663.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF284	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI00023DE184	InterPro:bHLH_dom	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr19:-:47691089..47696099

Molecular Weight (calculated)

68911.1 Da

IEP (calculated)

6.041

GRAVY (calculated)

-0.556

Length

633 amino acids

Sequence
(BLAST)

001: MPLHELYRVA KGKLDPIEMN NNTCAVDQSS VPNNDLLELV WEKGQISVQG QFSRARVSPN CKTLPSHCLP SHTPIGYANN AISTNTRMGK CGNLGVELNE
101: IRRLVPSGEV DLSEEEEDMV MPWFNYGMED SLQHGYSTDF FHEPSSYGVT MNELSASNNF SLLDRRNNCT KIFRDTHKHS SYAPVRSSVA DIAENNANNV
201: PSGSSGFSSL KMERQGPVMC SSSSTMMNFS HFAKPAAIVK ANIENIGLAS RSGNEGIQIK SAAATVTNPA ESTKVELSGE CPKKPATHNQ DQDVTVSTKC
301: DPSCKDVSKV DQNQTSNLVV GESVNKGHEA VEKGVELAVV SSSVCSGNGP ERGSEDPNQN LKRKSKDTED FESQSEDVEE ESVGVNKEVP ARRNGAKKSR
401: SAEVHNLSER RRRDRINEKM RALQELIPNC NKADKASMLD EAIEYLKTLQ LQLQIMSMGT SLCMPAMMLH PGMQHMHAPH MGPFSPIGVG MQMRLGVGCG
501: MGMPDANDIE SSRFIQVPQM QGTHHPSQGH PIPMPHAPIF SFPGEPFINP STLGLVETVD KASSAFGLIK DQIPQLAQNT NNGCNSTNQM STVQCEATIG
601: GFEHSILVLN SGHATSVNDR GAINPSTEDN PYH

Best Arabidopsis Sequence Match ( AT1G09530.3 )
(BLAST)

001: MPLFELFRLT KAKLESAQDR NPSPPVDEVV ELVWENGQIS TQSQSSRSRN IPPPQANSSR AREIGNGSKT TMVDEIPMSV PSLMTGLSQD DDFVPWLNHH
101: PSLDGYCSDF LRDVSSPVTV NEQESDMAVN QTAFPLFQRR KDGNESAPAA SSSQYNGFQS HSLYGSDRAR DLPSQQTNPD RFTQTQEPLI TSNKPSLVNF
201: SHFLRPATFA KTTNNNLHDT KEKSPQSPPN VFQTRVLGAK DSEDKVLNES VASATPKDNQ KACLISEDSC RKDQESEKAV VCSSVGSGNS LDGPSESPSL
301: SLKRKHSNIQ DIDCHSEDVE EESGDGRKEA GPSRTGLGSK RSRSAEVHNL SERRRRDRIN EKMRALQELI PNCNKVDKAS MLDEAIEYLK SLQLQVQIMS
401: MASGYYLPPA VMFPPGMGHY PAAAAAMAMG MGMPYAMGLP DLSRGGSSVN HGPQFQVSGM QQQPVAMGIP RVSGGGIFAG SSTIGNGSTR DLSGSKDQTT
501: TNNNSNLKPI KRKQGSSDQF CGSS

Arabidopsis Description

PIF3Transcription factor PIF3 [Source:UniProtKB/Swiss-Prot;Acc:O80536]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.