Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH55381 | Soybean | cytosol | 29.94 | 76.81 |
| KRH32094 | Soybean | nucleus | 93.22 | 58.3 |
| KRG95612 | Soybean | nucleus | 81.92 | 49.66 |
| KRH67287 | Soybean | nucleus | 81.36 | 49.32 |
| KRH72281 | Soybean | nucleus, plastid | 31.07 | 44.0 |
| KRG92679 | Soybean | nucleus | 51.98 | 27.71 |
| KRH34087 | Soybean | nucleus | 50.85 | 27.44 |
| CDY46133 | Canola | nucleus | 27.68 | 25.65 |
| KRH71636 | Soybean | golgi, plasma membrane, vacuole | 18.64 | 21.57 |
| KRH03075 | Soybean | nucleus | 42.94 | 20.71 |
| KRH04711 | Soybean | plastid | 18.08 | 20.0 |
| KRH12909 | Soybean | nucleus | 45.2 | 16.84 |
| KRH37912 | Soybean | nucleus | 45.2 | 16.33 |
| KRH76132 | Soybean | nucleus | 15.82 | 15.3 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 12.99 | 11.33 |
| KRH04595 | Soybean | nucleus | 16.95 | 11.03 |
| KRH05665 | Soybean | nucleus | 18.08 | 10.77 |
| KRH15381 | Soybean | nucleus | 18.08 | 10.77 |
| KRH28453 | Soybean | nucleus | 16.95 | 10.31 |
| KRH69138 | Soybean | cytosol, nucleus, vacuole | 10.17 | 10.0 |
| CDY46132 | Canola | endoplasmic reticulum | 9.04 | 9.09 |
| KRH77016 | Soybean | nucleus | 18.64 | 8.8 |
| KRH65412 | Soybean | nucleus | 18.64 | 8.31 |
| KRH67519 | Soybean | nucleus | 23.16 | 8.17 |
| KRH32290 | Soybean | nucleus | 22.6 | 8.15 |
| KRH19683 | Soybean | nucleus | 21.47 | 7.47 |
| KRH68348 | Soybean | nucleus | 21.47 | 7.35 |
| KRH54630 | Soybean | nucleus | 16.38 | 7.21 |
| KRH45975 | Soybean | nucleus | 20.9 | 7.05 |
| KRG96615 | Soybean | nucleus | 20.34 | 6.95 |
| KRH33663 | Soybean | nucleus | 17.51 | 6.9 |
| KRG88937 | Soybean | nucleus | 18.08 | 6.88 |
| KRG99030 | Soybean | nucleus | 20.9 | 6.76 |
| KRH14535 | Soybean | nucleus | 21.47 | 6.76 |
| KRH73584 | Soybean | nucleus | 21.47 | 6.76 |
| KRH75301 | Soybean | nucleus | 16.95 | 6.55 |
| KRH33733 | Soybean | nucleus | 23.16 | 5.93 |
| KRG96663 | Soybean | nucleus | 20.9 | 5.85 |
| KRG90443 | Soybean | nucleus | 23.73 | 5.82 |
| KRH68390 | Soybean | nucleus | 20.34 | 5.77 |
| KRH05051 | Soybean | nucleus | 6.21 | 2.75 |
| KRH71344 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02000889 | EnsemblPlantsGene:GLYMA_02G1428001 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | UniProt:K7K8B8 |
| EnsemblPlants:KRH71345 | ProteinID:KRH71345 | ProteinID:KRH71345.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 |
| PANTHER:PTHR16223:SF15 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00029593CB | InterPro:bHLH_dom | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:-:14721908..14724928
Molecular Weight (calculated)
19408.1 Da
IEP (calculated)
7.911
GRAVY (calculated)
-0.431
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MANHPSQAST DDFLDQILGL STFASADASP MMLQLNSGDA ATHLASFHAP PYQLGLSLDQ GKGPFLTPED ASGSGKRFRD DAVDTRPNNV FDGQPMPTTV
101: PTAPHLPAVR PRVRARRGQA TDPHSIAERL RRERIAERIR ALQELVPSVN KTDRAAMLDE IVDYVKFLRL QVKVNAL
101: PTAPHLPAVR PRVRARRGQA TDPHSIAERL RRERIAERIR ALQELVPSVN KTDRAAMLDE IVDYVKFLRL QVKVNAL
001: MANNNNIPHD SISDPSPTDD FFEQILGLSN FSGSSGSGLS GIGGVGPPPM MLQLGSGNEG NHNHMGAIGG GGPVGFHNQM FPLGLSLDQG KGHGFLKPDE
101: TGKRFQDDVL DNRCSSMKPI FHGQPMSQPA PPMPHQQSTI RPRVRARRGQ ATDPHSIAER LRRERIAERI RSLQELVPTV NKTDRAAMID EIVDYVKFLR
201: LQVKVLSMSR LGGAGAVAPL VTEMPLSSSV EDETQAVWEK WSNDGTERQV AKLMEENVGA AMQLLQSKAL CIMPISLAMA IYHSQPPDTS SSIVKPEMNP
301: PP
101: TGKRFQDDVL DNRCSSMKPI FHGQPMSQPA PPMPHQQSTI RPRVRARRGQ ATDPHSIAER LRRERIAERI RSLQELVPTV NKTDRAAMID EIVDYVKFLR
201: LQVKVLSMSR LGGAGAVAPL VTEMPLSSSV EDETQAVWEK WSNDGTERQV AKLMEENVGA AMQLLQSKAL CIMPISLAMA IYHSQPPDTS SSIVKPEMNP
301: PP
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT1G03040]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.