Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra036256.1-P | Field mustard | nucleus | 68.71 | 93.42 |
CDY21898 | Canola | nucleus | 90.0 | 92.69 |
CDY22062 | Canola | nucleus | 90.32 | 92.11 |
CDY18011 | Canola | nucleus | 89.35 | 91.12 |
CDX91293 | Canola | nucleus | 87.42 | 90.94 |
CDX90930 | Canola | nucleus | 89.68 | 89.68 |
Bra000872.1-P | Field mustard | nucleus | 89.35 | 89.64 |
CDX97278 | Canola | nucleus | 85.48 | 88.63 |
Bra018539.1-P | Field mustard | nucleus | 72.58 | 88.58 |
KRG95612 | Soybean | nucleus | 71.61 | 76.03 |
AT1G03040.3 | Thale cress | nucleus | 81.61 | 75.98 |
KRH32094 | Soybean | nucleus | 67.74 | 74.2 |
KRH67287 | Soybean | nucleus | 69.68 | 73.97 |
Os07t0182200-01 | Rice | cytosol | 32.26 | 73.53 |
VIT_07s0141g00220.t01 | Wine grape | nucleus | 68.06 | 73.01 |
Solyc09g065820.2.1 | Tomato | nucleus | 70.32 | 72.19 |
PGSC0003DMT400049768 | Potato | nucleus | 70.0 | 71.85 |
KRH55381 | Soybean | cytosol | 15.16 | 68.12 |
GSMUA_Achr5P03100_001 | Banana | nucleus | 51.29 | 58.03 |
GSMUA_Achr4P21070_001 | Banana | nucleus | 55.48 | 57.33 |
TraesCS5B01G445900.1 | Wheat | nucleus | 51.61 | 56.94 |
TraesCS5D01G449200.1 | Wheat | nucleus | 51.61 | 56.94 |
Zm00001d013073_P002 | Maize | nucleus | 52.26 | 56.84 |
KXG37359 | Sorghum | nucleus | 51.94 | 56.69 |
OQU88567 | Sorghum | nucleus | 50.65 | 56.68 |
Zm00001d018967_P001 | Maize | nucleus | 51.61 | 56.14 |
Os03t0797600-01 | Rice | nucleus | 52.9 | 55.78 |
TraesCS5A01G441900.1 | Wheat | nucleus | 48.39 | 53.38 |
HORVU5Hr1G106310.3 | Barley | nucleus | 50.0 | 49.68 |
GSMUA_Achr9P25560_001 | Banana | nucleus | 55.16 | 48.44 |
AT5G58010.1 | Thale cress | nucleus | 34.19 | 35.69 |
AT2G24260.1 | Thale cress | nucleus | 35.48 | 31.43 |
AT4G30980.2 | Thale cress | nucleus, plastid | 34.52 | 29.89 |
AT5G67110.1 | Thale cress | nucleus | 12.58 | 18.57 |
AT3G62090.2 | Thale cress | nucleus | 13.87 | 11.85 |
AT4G28815.1 | Thale cress | vacuole | 11.61 | 11.73 |
AT4G00050.1 | Thale cress | nucleus | 14.84 | 11.53 |
AT2G20180.2 | Thale cress | nucleus | 17.42 | 11.3 |
AT4G36930.1 | Thale cress | nucleus | 13.55 | 11.26 |
AT2G46970.1 | Thale cress | nucleus | 14.84 | 11.06 |
AT2G43010.5 | Thale cress | extracellular, vacuole | 16.77 | 11.02 |
AT4G28790.1 | Thale cress | nucleus | 14.19 | 10.65 |
AT3G59060.2 | Thale cress | nucleus | 15.16 | 10.59 |
AT1G09530.3 | Thale cress | nucleus | 15.16 | 8.97 |
AT4G28811.1 | Thale cress | nucleus | 15.48 | 8.82 |
AT4G28800.2 | Thale cress | nucleus | 11.94 | 8.1 |
Protein Annotations
MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:828126 | UniProt:A0A178UUM2 | ProteinID:AAC78259.1 | ProteinID:AEE82199.1 |
ProteinID:AEE82200.1 | ProteinID:AEE82201.1 | EMBL:AF367328 | EMBL:AF488592 | EMBL:AK316748 | ArrayExpress:AT4G02590 |
EnsemblPlantsGene:AT4G02590 | RefSeq:AT4G02590 | TAIR:AT4G02590 | RefSeq:AT4G02590-TAIR-G | EnsemblPlants:AT4G02590.1 | TAIR:AT4G02590.1 |
EMBL:AY088218 | EMBL:AY143951 | Unigene:At.20028 | UniProt:B9DFF4 | ProteinID:CAB80752.1 | GO:GO:0000003 |
GO:GO:0001046 | GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006366 | GO:GO:0006950 | GO:GO:0007275 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009567 | GO:GO:0009987 | GO:GO:0031347 |
GO:GO:0045944 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | RefSeq:NP_001031577.1 |
RefSeq:NP_001118919.1 | RefSeq:NP_567245.1 | UniProt:O22768 | ProteinID:OAO96864.1 | PFAM:PF00010 | PO:PO:0000013 |
PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50888 |
PANTHER:PTHR16223 | PANTHER:PTHR16223:SF15 | SMART:SM00353 | SUPFAM:SSF47459 | Symbol:UNE12 | UniParc:UPI00000AC668 |
InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
UNE12Transcription factor UNE12 [Source:UniProtKB/Swiss-Prot;Acc:O22768]
Coordinates
chr4:-:1137487..1140540
Molecular Weight (calculated)
33107.4 Da
IEP (calculated)
6.313
GRAVY (calculated)
-0.488
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNNPHDNL SDQTPSDDFF EQILGLPNFS ASSAAGLSGV DGGLGGGAPP MMLQLGSGEE GSHMGGLGGS GPTGFHNQMF PLGLSLDQGK GPGFLRPEGG
101: HGSGKRFSDD VVDNRCSSMK PVFHGQPMQQ PPPSAPHQPT SIRPRVRARR GQATDPHSIA ERLRRERIAE RIRALQELVP TVNKTDRAAM IDEIVDYVKF
201: LRLQVKVLSM SRLGGAGAVA PLVTDMPLSS SVEDETGEGG RTPQPAWEKW SNDGTERQVA KLMEENVGAA MQLLQSKALC MMPISLAMAI YHSQPPDTSS
301: VVKPENNPPQ
101: HGSGKRFSDD VVDNRCSSMK PVFHGQPMQQ PPPSAPHQPT SIRPRVRARR GQATDPHSIA ERLRRERIAE RIRALQELVP TVNKTDRAAM IDEIVDYVKF
201: LRLQVKVLSM SRLGGAGAVA PLVTDMPLSS SVEDETGEGG RTPQPAWEKW SNDGTERQVA KLMEENVGAA MQLLQSKALC MMPISLAMAI YHSQPPDTSS
301: VVKPENNPPQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.