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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036256.1-P Field mustard nucleus 68.71 93.42
CDY21898 Canola nucleus 90.0 92.69
CDY22062 Canola nucleus 90.32 92.11
CDY18011 Canola nucleus 89.35 91.12
CDX91293 Canola nucleus 87.42 90.94
CDX90930 Canola nucleus 89.68 89.68
Bra000872.1-P Field mustard nucleus 89.35 89.64
CDX97278 Canola nucleus 85.48 88.63
Bra018539.1-P Field mustard nucleus 72.58 88.58
KRG95612 Soybean nucleus 71.61 76.03
AT1G03040.3 Thale cress nucleus 81.61 75.98
KRH32094 Soybean nucleus 67.74 74.2
KRH67287 Soybean nucleus 69.68 73.97
Os07t0182200-01 Rice cytosol 32.26 73.53
VIT_07s0141g00220.t01 Wine grape nucleus 68.06 73.01
Solyc09g065820.2.1 Tomato nucleus 70.32 72.19
PGSC0003DMT400049768 Potato nucleus 70.0 71.85
KRH55381 Soybean cytosol 15.16 68.12
GSMUA_Achr5P03100_001 Banana nucleus 51.29 58.03
GSMUA_Achr4P21070_001 Banana nucleus 55.48 57.33
TraesCS5B01G445900.1 Wheat nucleus 51.61 56.94
TraesCS5D01G449200.1 Wheat nucleus 51.61 56.94
Zm00001d013073_P002 Maize nucleus 52.26 56.84
KXG37359 Sorghum nucleus 51.94 56.69
OQU88567 Sorghum nucleus 50.65 56.68
Zm00001d018967_P001 Maize nucleus 51.61 56.14
Os03t0797600-01 Rice nucleus 52.9 55.78
TraesCS5A01G441900.1 Wheat nucleus 48.39 53.38
HORVU5Hr1G106310.3 Barley nucleus 50.0 49.68
GSMUA_Achr9P25560_001 Banana nucleus 55.16 48.44
AT5G58010.1 Thale cress nucleus 34.19 35.69
AT2G24260.1 Thale cress nucleus 35.48 31.43
AT4G30980.2 Thale cress nucleus, plastid 34.52 29.89
AT5G67110.1 Thale cress nucleus 12.58 18.57
AT3G62090.2 Thale cress nucleus 13.87 11.85
AT4G28815.1 Thale cress vacuole 11.61 11.73
AT4G00050.1 Thale cress nucleus 14.84 11.53
AT2G20180.2 Thale cress nucleus 17.42 11.3
AT4G36930.1 Thale cress nucleus 13.55 11.26
AT2G46970.1 Thale cress nucleus 14.84 11.06
AT2G43010.5 Thale cress extracellular, vacuole 16.77 11.02
AT4G28790.1 Thale cress nucleus 14.19 10.65
AT3G59060.2 Thale cress nucleus 15.16 10.59
AT1G09530.3 Thale cress nucleus 15.16 8.97
AT4G28811.1 Thale cress nucleus 15.48 8.82
AT4G28800.2 Thale cress nucleus 11.94 8.1
Protein Annotations
MapMan:15.5.32Gene3D:4.10.280.10EntrezGene:828126UniProt:A0A178UUM2ProteinID:AAC78259.1ProteinID:AEE82199.1
ProteinID:AEE82200.1ProteinID:AEE82201.1EMBL:AF367328EMBL:AF488592EMBL:AK316748ArrayExpress:AT4G02590
EnsemblPlantsGene:AT4G02590RefSeq:AT4G02590TAIR:AT4G02590RefSeq:AT4G02590-TAIR-GEnsemblPlants:AT4G02590.1TAIR:AT4G02590.1
EMBL:AY088218EMBL:AY143951Unigene:At.20028UniProt:B9DFF4ProteinID:CAB80752.1GO:GO:0000003
GO:GO:0001046GO:GO:0001228GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0006366GO:GO:0006950GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009567GO:GO:0009987GO:GO:0031347
GO:GO:0045944GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638RefSeq:NP_001031577.1
RefSeq:NP_001118919.1RefSeq:NP_567245.1UniProt:O22768ProteinID:OAO96864.1PFAM:PF00010PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS50888
PANTHER:PTHR16223PANTHER:PTHR16223:SF15SMART:SM00353SUPFAM:SSF47459Symbol:UNE12UniParc:UPI00000AC668
InterPro:bHLH_domSEG:seg::::
Description
UNE12Transcription factor UNE12 [Source:UniProtKB/Swiss-Prot;Acc:O22768]
Coordinates
chr4:-:1137487..1140540
Molecular Weight (calculated)
33107.4 Da
IEP (calculated)
6.313
GRAVY (calculated)
-0.488
Length
310 amino acids
Sequence
(BLAST)
001: MASNNPHDNL SDQTPSDDFF EQILGLPNFS ASSAAGLSGV DGGLGGGAPP MMLQLGSGEE GSHMGGLGGS GPTGFHNQMF PLGLSLDQGK GPGFLRPEGG
101: HGSGKRFSDD VVDNRCSSMK PVFHGQPMQQ PPPSAPHQPT SIRPRVRARR GQATDPHSIA ERLRRERIAE RIRALQELVP TVNKTDRAAM IDEIVDYVKF
201: LRLQVKVLSM SRLGGAGAVA PLVTDMPLSS SVEDETGEGG RTPQPAWEKW SNDGTERQVA KLMEENVGAA MQLLQSKALC MMPISLAMAI YHSQPPDTSS
301: VVKPENNPPQ
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.