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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 4
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89007 Canola plastid 100.0 100.0
AT3G58850.1 Thale cress plastid 82.76 81.36
Bra007422.1-P Field mustard plastid 79.31 79.31
Bra004712.1-P Field mustard plastid 67.24 67.24
Bra000276.1-P Field mustard plastid 66.38 66.38
Bra016854.1-P Field mustard plastid 66.38 66.38
Solyc07g056360.1.1 Tomato nucleus 43.1 48.08
PGSC0003DMT400044708 Potato cytosol 43.1 45.87
KRH73670 Soybean plastid 42.24 37.98
KRH14475 Soybean nucleus 41.38 34.53
VIT_12s0142g00160.t01 Wine grape mitochondrion 38.79 29.8
Protein Annotations
EnsemblPlants:Bra014551.1EnsemblPlants:Bra014551.1-PEnsemblPlantsGene:Bra014551PANTHER:PTHR33124PANTHER:PTHR33124:SF3SEG:seg
UniParc:UPI0002543FE9UniProt:M4DDI3MapMan:15.5.32:::
Description
AT3G58850 (E=5e-038) PAR2, HLH2 | PAR2 (PHY RAPIDLY REGULATED 2)
Coordinates
chrA04:+:1399448..1399798
Molecular Weight (calculated)
12586.7 Da
IEP (calculated)
4.343
GRAVY (calculated)
-0.474
Length
116 amino acids
Sequence
(BLAST)
001: MEKTLATSNT KRSSPSPSNA VNARPAGFKR RTRQRLSDET ASVRESCVED DDEEGVEEKI EALQTIVPGG AALGVDALFE ETASYILALQ CQINAIKVLT
101: SFLESCEKDD DMKFGG
Best Arabidopsis Sequence Match ( AT3G58850.1 )
(BLAST)
001: MEKTLATSHT KRSSPPSPSS AVNTSSTGFN RRTRQRLSDA TASVSETDVE DEDEDEEGVE EKIEALQTIV PGGTELGVDA LFEETASYIL ALQCQINAIK
101: VLTTFLERCE KKDMKFGG
Arabidopsis Description
PAR2Transcription factor PAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXR7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.