Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71214 | Soybean | nucleus | 89.67 | 83.66 |
| VIT_05s0094g00440.t01 | Wine grape | nucleus | 50.15 | 48.2 |
| AT2G43650.1 | Thale cress | nucleus | 43.41 | 44.34 |
| Solyc11g072390.1.1 | Tomato | nucleus | 42.37 | 43.4 |
| CDX83470 | Canola | nucleus | 41.32 | 42.4 |
| Bra000317.1-P | Field mustard | nucleus | 40.87 | 41.87 |
| CDY44246 | Canola | nucleus | 40.42 | 40.24 |
| Solyc11g072320.1.1 | Tomato | nucleus | 42.07 | 40.2 |
| GSMUA_Achr6P08480_001 | Banana | nucleus | 39.37 | 39.79 |
| Zm00001d031326_P003 | Maize | plasma membrane | 33.83 | 35.7 |
| KXG25675 | Sorghum | nucleus | 33.68 | 35.55 |
| Os01t0104800-01 | Rice | nucleus | 33.53 | 34.73 |
| HORVU7Hr1G092560.2 | Barley | mitochondrion | 32.34 | 32.88 |
| TraesCS7B01G293400.1 | Wheat | mitochondrion | 32.19 | 32.72 |
| TraesCS7D01G387100.1 | Wheat | mitochondrion | 32.04 | 32.72 |
| TraesCS7A01G391500.1 | Wheat | mitochondrion | 31.89 | 32.52 |
| TraesCS5A01G398400.1 | Wheat | mitochondrion | 16.32 | 24.17 |
| KRH62262 | Soybean | nucleus | 8.23 | 17.35 |
| KRH52980 | Soybean | nucleus | 8.23 | 17.35 |
Protein Annotations
| EntrezGene:100792030 | MapMan:35.2 | EMBL:ACUP02004670 | ncoils:Coil | EnsemblPlantsGene:GLYMA_07G208300 | GO:GO:0000462 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0032040 | UniProt:K7L2Y0 | EnsemblPlants:KRH50217 |
| ProteinID:KRH50217 | ProteinID:KRH50217.1 | PFAM:PF04000 | PFAM:PF09368 | PANTHER:PTHR13237 | PANTHER:PTHR13237:SF8 |
| InterPro:Sas10/Utp3/C1D | InterPro:Sas10_C_dom | UniParc:UPI00023384BC | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr7:-:37798139..37803708
Molecular Weight (calculated)
75827.9 Da
IEP (calculated)
4.563
GRAVY (calculated)
-1.037
Length
668 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKRGTNYQ KKDTKSSKSK TSSRHATYSS DDMDDEIDAF HKQRDIVPLD INDDAEESED EELPIFDVQD VDEDEDEDED DEDDDDDDGD DDVAKMIRQR
101: KYLRAKFGGG DDEMHDVDDE EDEEDYKLTL GGKKFSHGAE NRNFEIQSSD DEAPKEEEEL ALQIQREKAK SLTMEDYDLV DISEDKDNEK LTLKDVSDKG
201: NEAIKSLDRD IIFTVDELNA LSKEEQMNAL YRSAPELVDW LSELNEVHRQ LECEINPFLS KVKKGEIVMK GEVRYFELKQ LIFLSYCQAI TFFLLLKSEG
301: QPVHDHPIIA RLEEIKKLLD QIKQLDTKLP FELEDILKEN NGLETVLNSD IENAPTTNDS IVKNQEQPLV SAKSTEETVV PNKQVEIQEL ESSKDGVQKT
401: RKVKPQKDHI GAQSLEMLKV RASLEEKLKN KGLYSSIAPK PSNALKRLRP VNGQLETYDD FNDDTMDANG EARLINGYGS KQVSQFLNAN MKKPKVVSGD
501: DDLPKRDDIG ERRRKHELRV LAGAGIRTED DDGDDQMTDL GPNEVTDEED DGGSGDSENE FYKQVEQLRA AKLAAKAETY SRNTSVSSLP EIVEGKRHIS
601: SQIEKNRGLT RNRNKAKKNP RKNYKLKHQK AVKNRKGQVQ SIKRPTAPYG GESSGINAAI SRSIRFKS
101: KYLRAKFGGG DDEMHDVDDE EDEEDYKLTL GGKKFSHGAE NRNFEIQSSD DEAPKEEEEL ALQIQREKAK SLTMEDYDLV DISEDKDNEK LTLKDVSDKG
201: NEAIKSLDRD IIFTVDELNA LSKEEQMNAL YRSAPELVDW LSELNEVHRQ LECEINPFLS KVKKGEIVMK GEVRYFELKQ LIFLSYCQAI TFFLLLKSEG
301: QPVHDHPIIA RLEEIKKLLD QIKQLDTKLP FELEDILKEN NGLETVLNSD IENAPTTNDS IVKNQEQPLV SAKSTEETVV PNKQVEIQEL ESSKDGVQKT
401: RKVKPQKDHI GAQSLEMLKV RASLEEKLKN KGLYSSIAPK PSNALKRLRP VNGQLETYDD FNDDTMDANG EARLINGYGS KQVSQFLNAN MKKPKVVSGD
501: DDLPKRDDIG ERRRKHELRV LAGAGIRTED DDGDDQMTDL GPNEVTDEED DGGSGDSENE FYKQVEQLRA AKLAAKAETY SRNTSVSSLP EIVEGKRHIS
601: SQIEKNRGLT RNRNKAKKNP RKNYKLKHQK AVKNRKGQVQ SIKRPTAPYG GESSGINAAI SRSIRFKS
001: MGKKGGTLKR SSKSTKTRKD IVEDQYDDEI DAFHKQRDIV PLDVNDDTDE SDEDDVQPVF DLQGVDDESE EDEDTEDEEE AENGLTAKMI RQKKYLRAKF
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
Arabidopsis Description
EMB2777Sas10/U3 ribonucleoprotein (Utp) family protein [Source:UniProtKB/TrEMBL;Acc:Q8L3P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.