Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83470 | Canola | nucleus | 96.32 | 96.47 |
| AT2G43650.1 | Thale cress | nucleus | 67.02 | 66.82 |
| Bra037695.1-P | Field mustard | nucleus | 20.09 | 52.82 |
| VIT_05s0094g00440.t01 | Wine grape | nucleus | 48.01 | 45.04 |
| Solyc11g072390.1.1 | Tomato | nucleus | 42.48 | 42.48 |
| KRH50217 | Soybean | cytosol, nucleus, plastid | 41.87 | 40.87 |
| GSMUA_Achr6P08480_001 | Banana | nucleus | 41.41 | 40.85 |
| Solyc11g072320.1.1 | Tomato | nucleus | 41.1 | 38.34 |
| KRH71214 | Soybean | nucleus | 41.41 | 37.71 |
| KXG25675 | Sorghum | nucleus | 35.89 | 36.97 |
| Os01t0104800-01 | Rice | nucleus | 36.35 | 36.74 |
| Zm00001d031326_P003 | Maize | plasma membrane | 35.12 | 36.18 |
| HORVU7Hr1G092560.2 | Barley | mitochondrion | 34.36 | 34.09 |
| TraesCS7B01G293400.1 | Wheat | mitochondrion | 34.2 | 33.94 |
| TraesCS7A01G391500.1 | Wheat | mitochondrion | 34.05 | 33.89 |
| TraesCS7D01G387100.1 | Wheat | mitochondrion | 33.59 | 33.49 |
| TraesCS5A01G398400.1 | Wheat | mitochondrion | 16.72 | 24.17 |
| Bra018680.1-P | Field mustard | nucleus | 9.51 | 20.0 |
| Bra018679.1-P | Field mustard | cytosol | 2.76 | 4.28 |
Protein Annotations
| MapMan:35.2 | EnsemblPlantsGene:Bra000317 | EnsemblPlants:Bra000317.1 | EnsemblPlants:Bra000317.1-P | ncoils:Coil | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006364 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | UniProt:M4C7Y9 | PFAM:PF04000 | PFAM:PF09368 |
| PANTHER:PTHR13237 | PANTHER:PTHR13237:SF8 | InterPro:Sas10/Utp3/C1D | InterPro:Sas10_C_dom | UniParc:UPI000253FD50 | SEG:seg |
Description
AT2G43650 (E=5e-192) EMB2777 | EMB2777 (EMBRYO DEFECTIVE 2777)
Coordinates
chrA03:+:10524261..10527748
Molecular Weight (calculated)
73402.9 Da
IEP (calculated)
4.541
GRAVY (calculated)
-1.086
Length
652 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKGGFKKR VSKSAKPRDD FVDGEYDDEI DAFHKQRDIV PLDVNDDTDD SSDEDDVQPV FDLKGVDNDE DEDEDTEEEE EEDKGLIAKM VGQNKYLKAK
101: FGAVDDEMAD DDKDEDEENK RVTWGSRKNA YMNADNVDFE NLSSDDEDLK LEEDEVLRMR AEQTGSITAA DAGLEDDSEE EEEESDRELT MEEIAVKGKK
201: GAKSITDKKE KDVEVIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELENKINPV MSKLKEEGVS LTGGARYLEV KQILLLAYCQ SITFYFLLKS
301: EGQPIRDHPV LARLVDIKAL LDKIKELDGE LPPGFEESLA RMQKVVKEDA TSSPVSASEV KITQDTVEPV KINTSKADTK KKGEKRKHKN DQVDIQSEEM
401: LKLRAALEGK LRSNGVFGST VSKPDKSQKR QKLANRKLET FDDFVDDADN STRDVPADKL TKLVSTKRKP KTVSGDDDLP QRDDIGERRR KFELKVLAGA
501: GVKSEEDGKN ESEVFGSDDD NDKDEDGDND MVDSDSESEG EDEFYKQVKQ NKQAKRAAKA EIYSREPSSI SFEPETVDGK RVVSKTILSN RGLTRHRNKD
601: KKNPRKNYRD KYTDKVKRRK GQVREIRKPT GSYGGEGSGI NPNISRSVRI KS
101: FGAVDDEMAD DDKDEDEENK RVTWGSRKNA YMNADNVDFE NLSSDDEDLK LEEDEVLRMR AEQTGSITAA DAGLEDDSEE EEEESDRELT MEEIAVKGKK
201: GAKSITDKKE KDVEVIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELENKINPV MSKLKEEGVS LTGGARYLEV KQILLLAYCQ SITFYFLLKS
301: EGQPIRDHPV LARLVDIKAL LDKIKELDGE LPPGFEESLA RMQKVVKEDA TSSPVSASEV KITQDTVEPV KINTSKADTK KKGEKRKHKN DQVDIQSEEM
401: LKLRAALEGK LRSNGVFGST VSKPDKSQKR QKLANRKLET FDDFVDDADN STRDVPADKL TKLVSTKRKP KTVSGDDDLP QRDDIGERRR KFELKVLAGA
501: GVKSEEDGKN ESEVFGSDDD NDKDEDGDND MVDSDSESEG EDEFYKQVKQ NKQAKRAAKA EIYSREPSSI SFEPETVDGK RVVSKTILSN RGLTRHRNKD
601: KKNPRKNYRD KYTDKVKRRK GQVREIRKPT GSYGGEGSGI NPNISRSVRI KS
001: MGKKGGTLKR SSKSTKTRKD IVEDQYDDEI DAFHKQRDIV PLDVNDDTDE SDEDDVQPVF DLQGVDDESE EDEDTEDEEE AENGLTAKMI RQKKYLRAKF
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
Arabidopsis Description
EMB2777Sas10/U3 ribonucleoprotein (Utp) family protein [Source:UniProtKB/TrEMBL;Acc:Q8L3P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.