Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031326_P003 | Maize | plasma membrane | 86.26 | 86.26 |
| Os01t0104800-01 | Rice | nucleus | 60.51 | 59.38 |
| HORVU7Hr1G092560.2 | Barley | mitochondrion | 54.5 | 52.51 |
| TraesCS7B01G293400.1 | Wheat | mitochondrion | 54.34 | 52.36 |
| TraesCS7D01G387100.1 | Wheat | mitochondrion | 54.03 | 52.29 |
| TraesCS7A01G391500.1 | Wheat | mitochondrion | 53.87 | 52.06 |
| GSMUA_Achr6P08480_001 | Banana | nucleus | 39.49 | 37.82 |
| VIT_05s0094g00440.t01 | Wine grape | nucleus | 40.76 | 37.12 |
| CDX83470 | Canola | nucleus | 37.44 | 36.41 |
| Bra000317.1-P | Field mustard | nucleus | 36.97 | 35.89 |
| Solyc11g072390.1.1 | Tomato | nucleus | 35.86 | 34.82 |
| AT2G43650.1 | Thale cress | nucleus | 35.07 | 33.95 |
| KRH50217 | Soybean | cytosol, nucleus, plastid | 35.55 | 33.68 |
| CDY44246 | Canola | nucleus | 34.91 | 32.94 |
| Solyc11g072320.1.1 | Tomato | nucleus | 35.39 | 32.05 |
| KRH71214 | Soybean | nucleus | 36.18 | 31.98 |
| EES04083 | Sorghum | nucleus | 10.43 | 19.82 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A1B6PJ51 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| EnsemblPlants:KXG25675 | ProteinID:KXG25675 | ProteinID:KXG25675.1 | PFAM:PF04000 | PFAM:PF09368 | PANTHER:PTHR13237 |
| PANTHER:PTHR13237:SF8 | EnsemblPlantsGene:SORBI_3007G217100 | InterPro:Sas10/Utp3/C1D | InterPro:Sas10_C_dom | UniParc:UPI0003C6590F | SEG:seg |
Description
hypothetical protein
Coordinates
chr7:+:64546236..64554330
Molecular Weight (calculated)
71413.0 Da
IEP (calculated)
5.332
GRAVY (calculated)
-1.134
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKRQRKTPG RAQAPKSKRT DELAAMSDSD NDEIDAFHKQ RDMIPFDTSD VRESEDDDVE QPVFDLEGVS DSESDDSKGE ESGDMAEADY EEWDKGYISK
101: LKRAQRAVKQ IAGGDDSMDE QEDETKENVW GRGKNAYYAA GEQSGDDEVD YEEAQRIQKN QEKKLSMKDF GLEDGESDEE NNVTKVSNHE TKMKEDFAVL
201: SGDDKMDVVY SSAPELVSLL SELKDAHEEL RAIGQLTSEV TSCLGKDKMQ PFEVKKACLL AHCQAITFYL LMKSEGLSVQ DHPVISRLIE TKNMVEKIKQ
301: VTMNSARQKG STDDHIMHSG TIQTDKNVAL DKQEGKFSNV LALDKVIQGA EVSESRKSEP SKNDFHEVNE QKNKDEHMGL HSLEMLKVRA DLEERLKKKG
401: LYNLKKSKPE KLSKTRTTSN KRGLQTLDDF DDEVLKNNQI MKPSKLVAAA AKSNKSMFVS GDDDLPKRDN IGERRRKHEL RVLSRVGANS VEDHELPDGD
501: ASEDDASEDD HESSEGGDAS EDGFYEDVKR QRTEKLSIKN ALYSRTPGIE PPEEETEGDG KRTISYQILK NRGLTRSRNK KKKNPRKNYR DKHKNKLVKR
601: KGQVRDIKKP SGPYGGEMSG INPNVSRSVR FKS
101: LKRAQRAVKQ IAGGDDSMDE QEDETKENVW GRGKNAYYAA GEQSGDDEVD YEEAQRIQKN QEKKLSMKDF GLEDGESDEE NNVTKVSNHE TKMKEDFAVL
201: SGDDKMDVVY SSAPELVSLL SELKDAHEEL RAIGQLTSEV TSCLGKDKMQ PFEVKKACLL AHCQAITFYL LMKSEGLSVQ DHPVISRLIE TKNMVEKIKQ
301: VTMNSARQKG STDDHIMHSG TIQTDKNVAL DKQEGKFSNV LALDKVIQGA EVSESRKSEP SKNDFHEVNE QKNKDEHMGL HSLEMLKVRA DLEERLKKKG
401: LYNLKKSKPE KLSKTRTTSN KRGLQTLDDF DDEVLKNNQI MKPSKLVAAA AKSNKSMFVS GDDDLPKRDN IGERRRKHEL RVLSRVGANS VEDHELPDGD
501: ASEDDASEDD HESSEGGDAS EDGFYEDVKR QRTEKLSIKN ALYSRTPGIE PPEEETEGDG KRTISYQILK NRGLTRSRNK KKKNPRKNYR DKHKNKLVKR
601: KGQVRDIKKP SGPYGGEMSG INPNVSRSVR FKS
001: MGKKGGTLKR SSKSTKTRKD IVEDQYDDEI DAFHKQRDIV PLDVNDDTDE SDEDDVQPVF DLQGVDDESE EDEDTEDEEE AENGLTAKMI RQKKYLRAKF
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
Arabidopsis Description
EMB2777Sas10/U3 ribonucleoprotein (Utp) family protein [Source:UniProtKB/TrEMBL;Acc:Q8L3P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.