Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G293400.1 | Wheat | mitochondrion | 96.02 | 95.59 |
| TraesCS7A01G391500.1 | Wheat | mitochondrion | 92.97 | 92.82 |
| HORVU7Hr1G092560.2 | Barley | mitochondrion | 87.46 | 87.06 |
| Os01t0104800-01 | Rice | nucleus | 55.35 | 56.12 |
| KXG25675 | Sorghum | nucleus | 52.29 | 54.03 |
| Zm00001d031326_P003 | Maize | plasma membrane | 50.46 | 52.13 |
| GSMUA_Achr6P08480_001 | Banana | nucleus | 36.7 | 36.31 |
| CDX83470 | Canola | nucleus | 34.4 | 34.56 |
| VIT_05s0094g00440.t01 | Wine grape | nucleus | 36.54 | 34.39 |
| Solyc11g072390.1.1 | Tomato | nucleus | 33.95 | 34.05 |
| Bra000317.1-P | Field mustard | nucleus | 33.49 | 33.59 |
| AT2G43650.1 | Thale cress | nucleus | 33.49 | 33.49 |
| KRH50217 | Soybean | cytosol, nucleus, plastid | 32.72 | 32.04 |
| CDY44246 | Canola | nucleus | 32.72 | 31.89 |
| Solyc11g072320.1.1 | Tomato | nucleus | 32.72 | 30.62 |
| KRH71214 | Soybean | nucleus | 33.03 | 30.17 |
| TraesCS5D01G303800.1 | Wheat | nucleus | 9.33 | 18.65 |
| TraesCS5D01G407900.1 | Wheat | mitochondrion, nucleus | 5.96 | 14.89 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G387100.1 | EnsemblPlantsGene:TraesCS7D01G387100 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| InterPro:Sas10/Utp3/C1D | InterPro:Sas10_C_dom | PANTHER:PTHR13237 | PANTHER:PTHR13237:SF8 | PFAM:PF04000 | PFAM:PF09368 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:501088603..501091970
Molecular Weight (calculated)
72833.1 Da
IEP (calculated)
4.865
GRAVY (calculated)
-1.111
Length
654 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKRPRSTRP PPAAGLHKSK RASEAAAAAI SDSDSDEIDA FHKQRDVIPL DIDDSRDSEE DALVMPIYDV EGVSDDESDD SEGGEDGDES EDGSEGGKDG
101: DAHAGDVEVW DKSYTAKIKR AQRAAKEAAG DDGSAEEDEE PEDDPKNWGT GKKTYYDDHE QDADDVEFDE LRRLQAENKL SMKDFGLEDD ESDEEDNKRS
201: KASDHQVKLA DEASPLESYT KLREDFAVLS KDEKMDVVYS SAPELVGLLA DLNDAHEQLK AIGPVTPELA AGQGKNKGKM QPLEVKRACL LAHCQAITFY
301: LLMRAEGLSV QDHPVIARLV ETKNMVQKLA NINLPNQDGD TEDHFMPDSS TLDEVNKAVS LENEGKSHNL LALDKVKQGA EVAELKKNKP SKGHHEIASK
401: DEFMGLQSKE MLKRRAILEE GLKQKGLCKL KPKLSKTMAT NSRKNLQTLD DFDDEVQKNS QVVKPTKLLV NAAGSVRNKL VSGDDDIPKR DEIGERRRKH
501: ELRVLARIGT NSREDDELPE DGDHTEEKLS QSSEEDGDDH ESSGSEDEFY KDIKRQRTEK RMGKEQSTPA TELEEESEGD GKRKISRQIE KNRGLTRSRN
601: KKLKNPRKKY RIKSDIQSKR RQGQVRSAKK PSGPYGGELS GINANVSRSV RFKS
101: DAHAGDVEVW DKSYTAKIKR AQRAAKEAAG DDGSAEEDEE PEDDPKNWGT GKKTYYDDHE QDADDVEFDE LRRLQAENKL SMKDFGLEDD ESDEEDNKRS
201: KASDHQVKLA DEASPLESYT KLREDFAVLS KDEKMDVVYS SAPELVGLLA DLNDAHEQLK AIGPVTPELA AGQGKNKGKM QPLEVKRACL LAHCQAITFY
301: LLMRAEGLSV QDHPVIARLV ETKNMVQKLA NINLPNQDGD TEDHFMPDSS TLDEVNKAVS LENEGKSHNL LALDKVKQGA EVAELKKNKP SKGHHEIASK
401: DEFMGLQSKE MLKRRAILEE GLKQKGLCKL KPKLSKTMAT NSRKNLQTLD DFDDEVQKNS QVVKPTKLLV NAAGSVRNKL VSGDDDIPKR DEIGERRRKH
501: ELRVLARIGT NSREDDELPE DGDHTEEKLS QSSEEDGDDH ESSGSEDEFY KDIKRQRTEK RMGKEQSTPA TELEEESEGD GKRKISRQIE KNRGLTRSRN
601: KKLKNPRKKY RIKSDIQSKR RQGQVRSAKK PSGPYGGELS GINANVSRSV RFKS
001: MGKKGGTLKR SSKSTKTRKD IVEDQYDDEI DAFHKQRDIV PLDVNDDTDE SDEDDVQPVF DLQGVDDESE EDEDTEDEEE AENGLTAKMI RQKKYLRAKF
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
Arabidopsis Description
EMB2777Sas10/U3 ribonucleoprotein (Utp) family protein [Source:UniProtKB/TrEMBL;Acc:Q8L3P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.