Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0094g00440.t01 | Wine grape | nucleus | 51.59 | 49.06 |
| Solyc11g072390.1.1 | Tomato | nucleus | 44.02 | 44.63 |
| Bra000317.1-P | Field mustard | nucleus | 40.85 | 41.41 |
| CDX83470 | Canola | nucleus | 40.7 | 41.32 |
| Solyc11g072320.1.1 | Tomato | nucleus | 43.42 | 41.06 |
| AT2G43650.1 | Thale cress | nucleus | 40.39 | 40.83 |
| KXG25675 | Sorghum | nucleus | 37.82 | 39.49 |
| KRH50217 | Soybean | cytosol, nucleus, plastid | 39.79 | 39.37 |
| Os01t0104800-01 | Rice | nucleus | 38.28 | 39.22 |
| Zm00001d031326_P003 | Maize | plasma membrane | 37.22 | 38.86 |
| CDY44246 | Canola | nucleus | 38.73 | 38.15 |
| TraesCS7B01G293400.1 | Wheat | mitochondrion | 37.07 | 37.29 |
| HORVU7Hr1G092560.2 | Barley | mitochondrion | 36.76 | 36.99 |
| KRH71214 | Soybean | nucleus | 39.94 | 36.87 |
| TraesCS7A01G391500.1 | Wheat | mitochondrion | 36.46 | 36.79 |
| TraesCS7D01G387100.1 | Wheat | mitochondrion | 36.31 | 36.7 |
| TraesCS5A01G398400.1 | Wheat | mitochondrion | 18.46 | 27.05 |
| GSMUA_Achr4P33490_001 | Banana | nucleus | 11.35 | 22.12 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P08480_001 | EnsemblPlants:GSMUA_Achr6T08480_001 | EnsemblPlantsGene:GSMUA_Achr6G08480_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | InterPro:Sas10/Utp3/C1D | InterPro:Sas10_C_dom | PANTHER:PTHR13237 | PANTHER:PTHR13237:SF8 | PFAM:PF04000 |
| PFAM:PF09368 | SEG:seg | UniParc:UPI000296E117 | UniProt:M0T597 | MapMan:35.2 | : |
Description
Putative Uncharacterized protein C3B8.09 [Source:GMGC_GENE;Acc:GSMUA_Achr6G08480_001]
Coordinates
chr6:-:5634978..5644631
Molecular Weight (calculated)
75726.7 Da
IEP (calculated)
5.346
GRAVY (calculated)
-1.019
Length
661 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGKGTKISR KAVRSSAKNH STNNAFREDD IDDEIDAFHK QRDVVPLDVN GESEDEDLIE PVFDFEVRNT FWNDNSRSDD DGEESDGIND NIKDKGFAAK
101: IARQAKYLRQ KFGGDDDEMD DHEEEKEEER KAIWGRRKSL YYNADNVDYE LQSSDEDLPM EEEAEVLKIQ REKAKTLSME DFGLENNEQD ESDSDRQNDM
201: HQDALVGKTA MGRRSAVDDD NSYQNYEEIK KDFTDLSKEE QMDVVYSSAP ELVGLLAELN DALDQVREVK PIVHKVGETT ERGRVGMHFL EVKQVLLLTY
301: CQSISFYLLL KSEGHPVRDH PVIARLVEIK NLLEKQMKQI DVNLHPQLED MAINSLKNVL TRGNVPLEVK PVTTGQQPKP IKDFEKSKSS QDVHNASVSQ
401: KKEDVQMGLQ SLEMLKVREN LEAKLKKKGI YNLTKPKDVR KAVNGQLETL DDFDDEIKHT AVKNFESLSE SRKLSQLVGT KANKSKIVSG DDDLPKRDDI
501: GERRRRHELR VLARAGAVDD SDLMEDEDGG LGTRSMDVKD QDIDETGESE DEFYKEVKRQ RVEKLRAKSE KYSGTLAVPS FVEAETDGKR QITYQMEKNR
601: GLTRPRKKLL KNPRKKYRHK HQKQLIRRKG QVRDIRKPTG PYGGEATGIN TSVSRSIRFK S
101: IARQAKYLRQ KFGGDDDEMD DHEEEKEEER KAIWGRRKSL YYNADNVDYE LQSSDEDLPM EEEAEVLKIQ REKAKTLSME DFGLENNEQD ESDSDRQNDM
201: HQDALVGKTA MGRRSAVDDD NSYQNYEEIK KDFTDLSKEE QMDVVYSSAP ELVGLLAELN DALDQVREVK PIVHKVGETT ERGRVGMHFL EVKQVLLLTY
301: CQSISFYLLL KSEGHPVRDH PVIARLVEIK NLLEKQMKQI DVNLHPQLED MAINSLKNVL TRGNVPLEVK PVTTGQQPKP IKDFEKSKSS QDVHNASVSQ
401: KKEDVQMGLQ SLEMLKVREN LEAKLKKKGI YNLTKPKDVR KAVNGQLETL DDFDDEIKHT AVKNFESLSE SRKLSQLVGT KANKSKIVSG DDDLPKRDDI
501: GERRRRHELR VLARAGAVDD SDLMEDEDGG LGTRSMDVKD QDIDETGESE DEFYKEVKRQ RVEKLRAKSE KYSGTLAVPS FVEAETDGKR QITYQMEKNR
601: GLTRPRKKLL KNPRKKYRHK HQKQLIRRKG QVRDIRKPTG PYGGEATGIN TSVSRSIRFK S
001: MGKKGGTLKR SSKSTKTRKD IVEDQYDDEI DAFHKQRDIV PLDVNDDTDE SDEDDVQPVF DLQGVDDESE EDEDTEDEEE AENGLTAKMI RQKKYLRAKF
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
Arabidopsis Description
EMB2777Sas10/U3 ribonucleoprotein (Utp) family protein [Source:UniProtKB/TrEMBL;Acc:Q8L3P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.