Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G387100.1 | Wheat | mitochondrion | 95.59 | 96.02 |
| TraesCS7A01G391500.1 | Wheat | mitochondrion | 90.26 | 90.53 |
| HORVU7Hr1G092560.2 | Barley | mitochondrion | 86.76 | 86.76 |
| Os01t0104800-01 | Rice | nucleus | 55.71 | 56.74 |
| KXG25675 | Sorghum | nucleus | 52.36 | 54.34 |
| Zm00001d031326_P003 | Maize | plasma membrane | 50.23 | 52.13 |
| GSMUA_Achr6P08480_001 | Banana | nucleus | 37.29 | 37.07 |
| CDX83470 | Canola | nucleus | 34.7 | 35.02 |
| VIT_05s0094g00440.t01 | Wine grape | nucleus | 36.68 | 34.68 |
| Solyc11g072390.1.1 | Tomato | nucleus | 34.25 | 34.51 |
| AT2G43650.1 | Thale cress | nucleus | 34.09 | 34.25 |
| Bra000317.1-P | Field mustard | nucleus | 33.94 | 34.2 |
| CDY44246 | Canola | nucleus | 33.18 | 32.49 |
| KRH50217 | Soybean | cytosol, nucleus, plastid | 32.72 | 32.19 |
| Solyc11g072320.1.1 | Tomato | nucleus | 33.03 | 31.04 |
| KRH71214 | Soybean | nucleus | 33.03 | 30.31 |
| TraesCS5B01G296000.1 | Wheat | nucleus | 9.13 | 18.24 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G293400.1 | EnsemblPlantsGene:TraesCS7B01G293400 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| InterPro:Sas10/Utp3/C1D | InterPro:Sas10_C_dom | PANTHER:PTHR13237 | PANTHER:PTHR13237:SF8 | PFAM:PF04000 | PFAM:PF09368 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:530372979..530376293
Molecular Weight (calculated)
73115.3 Da
IEP (calculated)
4.893
GRAVY (calculated)
-1.140
Length
657 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKRPRSTRP PPAAGLHKSK RASEAAAAAI SDSDDDEIDA FHKQRDVIPL DVDDSRDSEE DALVMPIYDV EGVSDDESDD SEGGEDGDES EDGSEGGEDG
101: DAHAGDVEVW DKSYTAKIKR AQRAAKQAAG DDGSAEEDEE PEDDPKNWGT GKKTYYDDHE QDADDVEFDE LRRLQAENKL SMKDFGLEDD ESDEEDNKPS
201: KASGHQVKLA DEASPLESYT KLREDFAVLS KDEKMDVVYS SAPELVGLLA DLNDAHEQLK AIGPVTNELA AGQGKNKGKM QPLEVKRACL LAHCQSITFY
301: LLMRAEGLSV QDHPVIARLV ETKNMVQKLA NINLPNQDGD TEDHFMPDSS TLDEVNKAVS LENEGKSSNL LDMDKVKQGA EVAELTKNKP SKGHHEIAKR
401: KGKDEHMGLQ SIEMLKRRAI LEEGLKQKGL SKLKPKLSKT LATNSRKKLQ TLDDFDDEVQ KNSQVVKPTK LLVNAAGSVR NKFVSGDDDI PKRDEIGERR
501: RKHELRVLAR IGTNSREDDE LPEDGGHTEE KLSQSSEEDG DDHESSGSED EFYKDIKRQR TEKRMGKEQS TPATELEEES EGDGKRKISR QIEKNRGLTR
601: SRNKQLKNPR KKYRIKSDKH SKRRQGQVRS TKKPSGPYGG ELSGINANVS RSVRFKS
101: DAHAGDVEVW DKSYTAKIKR AQRAAKQAAG DDGSAEEDEE PEDDPKNWGT GKKTYYDDHE QDADDVEFDE LRRLQAENKL SMKDFGLEDD ESDEEDNKPS
201: KASGHQVKLA DEASPLESYT KLREDFAVLS KDEKMDVVYS SAPELVGLLA DLNDAHEQLK AIGPVTNELA AGQGKNKGKM QPLEVKRACL LAHCQSITFY
301: LLMRAEGLSV QDHPVIARLV ETKNMVQKLA NINLPNQDGD TEDHFMPDSS TLDEVNKAVS LENEGKSSNL LDMDKVKQGA EVAELTKNKP SKGHHEIAKR
401: KGKDEHMGLQ SIEMLKRRAI LEEGLKQKGL SKLKPKLSKT LATNSRKKLQ TLDDFDDEVQ KNSQVVKPTK LLVNAAGSVR NKFVSGDDDI PKRDEIGERR
501: RKHELRVLAR IGTNSREDDE LPEDGGHTEE KLSQSSEEDG DDHESSGSED EFYKDIKRQR TEKRMGKEQS TPATELEEES EGDGKRKISR QIEKNRGLTR
601: SRNKQLKNPR KKYRIKSDKH SKRRQGQVRS TKKPSGPYGG ELSGINANVS RSVRFKS
001: MGKKGGTLKR SSKSTKTRKD IVEDQYDDEI DAFHKQRDIV PLDVNDDTDE SDEDDVQPVF DLQGVDDESE EDEDTEDEEE AENGLTAKMI RQKKYLRAKF
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
Arabidopsis Description
EMB2777Sas10/U3 ribonucleoprotein (Utp) family protein [Source:UniProtKB/TrEMBL;Acc:Q8L3P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.