Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G387100.1 | Wheat | mitochondrion | 92.82 | 92.97 |
| TraesCS7B01G293400.1 | Wheat | mitochondrion | 90.53 | 90.26 |
| HORVU7Hr1G092560.2 | Barley | mitochondrion | 89.01 | 88.74 |
| Os01t0104800-01 | Rice | nucleus | 53.89 | 54.73 |
| KXG25675 | Sorghum | nucleus | 52.06 | 53.87 |
| Zm00001d031326_P003 | Maize | plasma membrane | 50.38 | 52.13 |
| GSMUA_Achr6P08480_001 | Banana | nucleus | 36.79 | 36.46 |
| TraesCS5A01G398400.1 | Wheat | mitochondrion | 24.58 | 35.7 |
| CDX83470 | Canola | nucleus | 34.66 | 34.87 |
| VIT_05s0094g00440.t01 | Wine grape | nucleus | 36.34 | 34.24 |
| Solyc11g072390.1.1 | Tomato | nucleus | 34.05 | 34.2 |
| Bra000317.1-P | Field mustard | nucleus | 33.89 | 34.05 |
| AT2G43650.1 | Thale cress | nucleus | 33.44 | 33.49 |
| CDY44246 | Canola | nucleus | 33.13 | 32.34 |
| KRH50217 | Soybean | cytosol, nucleus, plastid | 32.52 | 31.89 |
| Solyc11g072320.1.1 | Tomato | nucleus | 33.13 | 31.04 |
| KRH71214 | Soybean | nucleus | 32.82 | 30.03 |
| TraesCS5A01G296700.1 | Wheat | nucleus | 9.16 | 18.35 |
| TraesCS3A01G436800.1 | Wheat | nucleus | 4.89 | 16.16 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G391500.1 | EnsemblPlantsGene:TraesCS7A01G391500 | InterPro:Sas10/Utp3/C1D | InterPro:Sas10_C_dom | PANTHER:PTHR13237 | PANTHER:PTHR13237:SF8 |
| PFAM:PF04000 | PFAM:PF09368 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr7A:+:567576526..567579962
Molecular Weight (calculated)
72888.1 Da
IEP (calculated)
4.840
GRAVY (calculated)
-1.113
Length
655 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKRPRSTRP PPAAGLHKSK RASEAAAAAA ISDSDDDEID AFHKQRDVIP LDVDDSRDSE EDALVMPIYD VEGVSDDESD DSEGGEDGDE SEDGSEGAKD
101: GDAHAGDVEV WDKSYTAKIK RAQKAAKEAA GDDGSAEEDE EPEDDPKNWG TGKKTYYDDH EQDADDVEFD ELRRLQAENK LSMKDFGLED DESDEEGNKP
201: SKASDYQVKL GDEASPLESY TKLREDFAVL SRDEKMDVVY SSAPELVGLL ADLNEAHEQL KAIGPVTPEL AAGQGKNKGK MQPLEVKRAC LLAHCQAITF
301: YLLMRAEGLS VQDHPVIARL VETKNMVQKL ANINILSQDG DTEDHFMHDS STLDEVNKAV ALENEGRTRN LLALDKVKQG AEVAELKKNK PSKGHHEIAS
401: KDEYMGLQSK EMLKRRAILE EGLKQKGLCK SKPKLSKTMT TNSRKNLQTL DDFDDEVQKN SQVVKPTKLL VNAAGSVRNK LVSGDDDIPK RDEIGERRRK
501: HELRVLARIG TNSREDDELP EDGDHTEEKL SQSGEEDGDD HESSGSEDEF YKDIKRQRTE KRLGKEQSTP ATELEEESEG DGKRKISRQI EKNRGLTRSR
601: NKNLKNPRKK YRIKSDKQSK RRQGQVRSAK KPSGPYGGEL SGINANVSRS VRFKS
101: GDAHAGDVEV WDKSYTAKIK RAQKAAKEAA GDDGSAEEDE EPEDDPKNWG TGKKTYYDDH EQDADDVEFD ELRRLQAENK LSMKDFGLED DESDEEGNKP
201: SKASDYQVKL GDEASPLESY TKLREDFAVL SRDEKMDVVY SSAPELVGLL ADLNEAHEQL KAIGPVTPEL AAGQGKNKGK MQPLEVKRAC LLAHCQAITF
301: YLLMRAEGLS VQDHPVIARL VETKNMVQKL ANINILSQDG DTEDHFMHDS STLDEVNKAV ALENEGRTRN LLALDKVKQG AEVAELKKNK PSKGHHEIAS
401: KDEYMGLQSK EMLKRRAILE EGLKQKGLCK SKPKLSKTMT TNSRKNLQTL DDFDDEVQKN SQVVKPTKLL VNAAGSVRNK LVSGDDDIPK RDEIGERRRK
501: HELRVLARIG TNSREDDELP EDGDHTEEKL SQSGEEDGDD HESSGSEDEF YKDIKRQRTE KRLGKEQSTP ATELEEESEG DGKRKISRQI EKNRGLTRSR
601: NKNLKNPRKK YRIKSDKQSK RRQGQVRSAK KPSGPYGGEL SGINANVSRS VRFKS
001: MGKKGGTLKR SSKSTKTRKD IVEDQYDDEI DAFHKQRDIV PLDVNDDTDE SDEDDVQPVF DLQGVDDESE EDEDTEDEEE AENGLTAKMI RQKKYLRAKF
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
Arabidopsis Description
EMB2777Sas10/U3 ribonucleoprotein (Utp) family protein [Source:UniProtKB/TrEMBL;Acc:Q8L3P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.