Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G391500.1 | Wheat | mitochondrion | 88.74 | 89.01 |
| TraesCS7D01G387100.1 | Wheat | mitochondrion | 87.06 | 87.46 |
| TraesCS7B01G293400.1 | Wheat | mitochondrion | 86.76 | 86.76 |
| Os01t0104800-01 | Rice | nucleus | 56.16 | 57.21 |
| KXG25675 | Sorghum | nucleus | 52.51 | 54.5 |
| Zm00001d031326_P003 | Maize | plasma membrane | 50.08 | 51.97 |
| GSMUA_Achr6P08480_001 | Banana | nucleus | 36.99 | 36.76 |
| CDX83470 | Canola | nucleus | 34.7 | 35.02 |
| Solyc11g072390.1.1 | Tomato | nucleus | 34.7 | 34.97 |
| AT2G43650.1 | Thale cress | nucleus | 34.55 | 34.71 |
| VIT_05s0094g00440.t01 | Wine grape | nucleus | 36.68 | 34.68 |
| Bra000317.1-P | Field mustard | nucleus | 34.09 | 34.36 |
| CDY44246 | Canola | nucleus | 33.03 | 32.34 |
| KRH50217 | Soybean | cytosol, nucleus, plastid | 32.88 | 32.34 |
| Solyc11g072320.1.1 | Tomato | nucleus | 33.79 | 31.76 |
| KRH71214 | Soybean | nucleus | 33.49 | 30.73 |
| HORVU3Hr1G067740.1 | Barley | cytosol | 4.41 | 28.43 |
| HORVU5Hr1G077970.1 | Barley | cytosol | 5.78 | 24.68 |
| HORVU5Hr1G078110.2 | Barley | nucleus, plastid | 10.05 | 17.19 |
| HORVU3Hr1G095480.13 | Barley | nucleus | 2.44 | 15.09 |
Protein Annotations
| EMBL:AK364155 | EnsemblPlants:HORVU7Hr1G092560.2 | EnsemblPlantsGene:HORVU7Hr1G092560 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | InterPro:Sas10/Utp3/C1D | InterPro:Sas10_C_dom | PANTHER:PTHR13237 | PANTHER:PTHR13237:SF8 | PFAM:PF04000 |
| PFAM:PF09368 | SEG:seg | UniParc:UPI00020066B8 | UniProt:F2DJT7 | MapMan:35.2 | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DJT7]
Coordinates
chrchr7H:-:566886052..566889638
Molecular Weight (calculated)
73196.7 Da
IEP (calculated)
4.894
GRAVY (calculated)
-1.096
Length
657 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKRPRSTRP PPAAGLHKSK RASEAAAAAA TSDSDDDEID AFHKQRDVIP LNVDDSRDSE EDALVMPIYD VEGVSDDESD DSEEAEEGKE DDGSEGGEDG
101: DAGAGDVEVW DKSYTAKIKR AQRAAKQAAG DDGSAEEDEE PEDDPRNWGV GKKKYYDDHE QDADDVEFEE IRRLQADNKL SMKDFGLEDD ESDKEDKPSK
201: ASAHQVKLAD EASPLESYTK LREDFAVLSK DEKMDVVYSS APELVGLLAD LNDAQEQLKA IGPVTSEVAA GQGKDKGRMQ PLEVKRACLL AHCQSITFYL
301: LMRAEGLSVQ DHPVIARLVE TKSMVQKLAN INLPSQDGDT EDRFMPDSST LDVVNKAASL ENEGKSSNLL ALDKVKQGAE VAELKKNKPS KGHHDEITKR
401: KVKDEYMGLQ SIEMLKRRAI LEEGLKQKGL CKLKPKLSKT MATNSRKNLQ TLDDFDDEVQ KNSQVVKPTK LLVNAAGSVR NKFVSGDDDI PKRDEIGERR
501: RKHELRVLAR IGTNSREDDE LPEDGDHTEE KLSQSSEEDG DDYESSGSED EFYKDIKRQR TEKRLGKEQS TPVTELEEES EGDGKRKISR QIEKNRGLTR
601: SRNKKLKNPR KKYRIKSDKQ SKRRQGQVRS AKKPSGPYGG ELSGINANVS RSVRFKS
101: DAGAGDVEVW DKSYTAKIKR AQRAAKQAAG DDGSAEEDEE PEDDPRNWGV GKKKYYDDHE QDADDVEFEE IRRLQADNKL SMKDFGLEDD ESDKEDKPSK
201: ASAHQVKLAD EASPLESYTK LREDFAVLSK DEKMDVVYSS APELVGLLAD LNDAQEQLKA IGPVTSEVAA GQGKDKGRMQ PLEVKRACLL AHCQSITFYL
301: LMRAEGLSVQ DHPVIARLVE TKSMVQKLAN INLPSQDGDT EDRFMPDSST LDVVNKAASL ENEGKSSNLL ALDKVKQGAE VAELKKNKPS KGHHDEITKR
401: KVKDEYMGLQ SIEMLKRRAI LEEGLKQKGL CKLKPKLSKT MATNSRKNLQ TLDDFDDEVQ KNSQVVKPTK LLVNAAGSVR NKFVSGDDDI PKRDEIGERR
501: RKHELRVLAR IGTNSREDDE LPEDGDHTEE KLSQSSEEDG DDYESSGSED EFYKDIKRQR TEKRLGKEQS TPVTELEEES EGDGKRKISR QIEKNRGLTR
601: SRNKKLKNPR KKYRIKSDKQ SKRRQGQVRS AKKPSGPYGG ELSGINANVS RSVRFKS
001: MGKKGGTLKR SSKSTKTRKD IVEDQYDDEI DAFHKQRDIV PLDVNDDTDE SDEDDVQPVF DLQGVDDESE EDEDTEDEEE AENGLTAKMI RQKKYLRAKF
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
101: GDGDDEMADD DKDKEEDKRS TWGGRSGLYH SGDNVDFDIL SSDDEDIKAE EEEVIRLRAE QLGSITAADA GLDDDSEEDS DRELTMEEIS DKGKQATKSI
201: TDKKEKGDKD THVEEIKKDI NSLSKEEQMD VVYSSAPEIV GLLSELNDAV EELESKINPV MNKLKEGEIS LNGLARYLEV KQLLLLTYCQ SITFYLLLKS
301: EGQPIRDHPV LARLVEIKSL LDKIKELDEE LPPGFEESLA RSIANGAVQK VVKEDQLTSP VSDSVDRITQ DTAKPMKIDN AREEKKKKGE KRKHQNDLVD
401: VQSEEMLKLR AALEGKLRTN GVLGSTVSKS DKAQKRQKLA NRKLETFDDY VDDADNSTHN VTADKLTKLV STKRKPKTIS GDDDLPQRDD IGERRRKFEL
501: RVLAGAGVKS SEGDGRNKNG AFASDDEDDN DGDNNDMVDN DGESEDEFYK QVKQKQQAKR AAKAEIYSRK PHLMPSSPEH VDGKRHISNQ MVSNRGLTRQ
601: RNRDLKNPRK KYRKNYEKKV TRRKGQVRDI RKQTGPYAGE ARGINPNTSR SIRM
Arabidopsis Description
EMB2777Sas10/U3 ribonucleoprotein (Utp) family protein [Source:UniProtKB/TrEMBL;Acc:Q8L3P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.