Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G077970.1 | Barley | cytosol | 72.55 | 48.05 |
| PGSC0003DMT400024201 | Potato | cytosol | 58.82 | 23.08 |
| Zm00001d012087_P005 | Maize | nucleus | 64.71 | 19.88 |
| Zm00001d046836_P003 | Maize | nucleus | 63.73 | 19.64 |
| HORVU5Hr1G078110.2 | Barley | nucleus, plastid | 73.53 | 19.53 |
| EES04083 | Sorghum | nucleus | 63.73 | 19.52 |
| AT1G07840.2 | Thale cress | nucleus | 58.82 | 19.23 |
| CDX93614 | Canola | nucleus | 58.82 | 19.23 |
| Solyc04g076560.2.1 | Tomato | nucleus | 58.82 | 19.17 |
| PGSC0003DMT400022451 | Potato | nucleus | 58.82 | 19.05 |
| Bra018680.1-P | Field mustard | nucleus | 57.84 | 19.03 |
| VIT_15s0046g02660.t01 | Wine grape | nucleus | 57.84 | 18.67 |
| KRH52980 | Soybean | nucleus | 57.84 | 18.61 |
| VIT_18s0001g07750.t01 | Wine grape | nucleus | 55.88 | 17.81 |
| KRH62262 | Soybean | nucleus | 54.9 | 17.67 |
| GSMUA_Achr4P33490_001 | Banana | nucleus | 56.86 | 17.11 |
| CDX95119 | Canola | plastid | 58.82 | 16.04 |
| HORVU7Hr1G092560.2 | Barley | mitochondrion | 28.43 | 4.41 |
| Zm00001d026099_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 7.84 | 3.11 |
| HORVU3Hr1G095480.13 | Barley | nucleus | 0.98 | 0.94 |
| Zm00001d019592_P001 | Maize | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G067740.1 | EnsemblPlantsGene:HORVU3Hr1G067740 | InterPro:Sas10/Utp3/C1D | PANTHER:PTHR13237 | PANTHER:PTHR13237:SF7 | PFAM:PF04000 |
| UniParc:UPI000B468D22 | UniProt:A0A287LGS1 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:514122419..514124174
Molecular Weight (calculated)
12088.1 Da
IEP (calculated)
10.344
GRAVY (calculated)
-0.359
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: RHRKRHRWLI FHPGCCTEVR KKQLLTGDGI GYLEAKHHLL LSYCQDLVYY LLRKAKGLSV DGHPVVRSLV KIRLFLEKIR PIDKKMEYQI QKLTCRWCSC
101: PG
101: PG
001: MEEITKPVLV GIVKKEAPQL ASVLREMKNV LDVVRSKVEA LTALVKANSF PTAGGISYLE AKHLLLLSYC QDLVYYILRK AKGLSIDGHP LVRSLVEIRM
101: FLEKIRPIDK KLQYQIQKLT TAGGPVTELA HSEGKGSCEA QKSEDLSNYK PKPDLLADKE DDQEDDGVYR PPKFAPMSME DKTSKQERDA ARKEKHFFRQ
201: ATENTYMKDV LDDLEDRPEE IRDYYGVESN EQKRFMAQYE RQQKAEEELF TRAPRTKEDK KREKRLKSSS GYVFALVGN
101: FLEKIRPIDK KLQYQIQKLT TAGGPVTELA HSEGKGSCEA QKSEDLSNYK PKPDLLADKE DDQEDDGVYR PPKFAPMSME DKTSKQERDA ARKEKHFFRQ
201: ATENTYMKDV LDDLEDRPEE IRDYYGVESN EQKRFMAQYE RQQKAEEELF TRAPRTKEDK KREKRLKSSS GYVFALVGN
Arabidopsis Description
AT1G07840 protein [Source:UniProtKB/TrEMBL;Acc:Q93ZQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.