Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- extracellular 3
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019592_P001 | Maize | nucleus | 28.02 | 83.72 |
| HORVU3Hr1G095480.13 | Barley | nucleus | 22.96 | 55.66 |
| TraesCS3A01G436800.1 | Wheat | nucleus | 32.68 | 42.42 |
| Zm00001d012087_P005 | Maize | nucleus | 49.81 | 38.55 |
| Zm00001d046836_P003 | Maize | nucleus | 49.03 | 38.07 |
| EES04083 | Sorghum | nucleus | 48.64 | 37.54 |
| Zm00001d014256_P003 | Maize | cytosol | 33.07 | 33.2 |
| TraesCS5D01G303800.1 | Wheat | nucleus | 38.52 | 30.28 |
| TraesCS5A01G296700.1 | Wheat | nucleus | 38.52 | 30.28 |
| TraesCS5B01G296000.1 | Wheat | nucleus | 37.35 | 29.18 |
| HORVU5Hr1G078110.2 | Barley | nucleus, plastid | 36.97 | 24.74 |
| AT1G07840.2 | Thale cress | nucleus | 21.79 | 17.95 |
| GSMUA_Achr4P33490_001 | Banana | nucleus | 23.35 | 17.7 |
| CDX93614 | Canola | nucleus | 21.4 | 17.63 |
| VIT_15s0046g02660.t01 | Wine grape | nucleus | 21.4 | 17.41 |
| KRH52980 | Soybean | nucleus | 21.4 | 17.35 |
| VIT_18s0001g07750.t01 | Wine grape | nucleus | 21.4 | 17.19 |
| KRH62262 | Soybean | nucleus | 21.01 | 17.03 |
| Bra018680.1-P | Field mustard | nucleus | 20.23 | 16.77 |
| PGSC0003DMT400022451 | Potato | nucleus | 20.23 | 16.51 |
| Solyc04g076560.2.1 | Tomato | nucleus | 19.84 | 16.29 |
| CDX95119 | Canola | plastid | 21.4 | 14.71 |
| PGSC0003DMT400024201 | Potato | cytosol | 14.79 | 14.62 |
| HORVU5Hr1G077970.1 | Barley | cytosol | 5.84 | 9.74 |
| HORVU3Hr1G067740.1 | Barley | cytosol | 3.11 | 7.84 |
| Zm00001d031326_P003 | Maize | plasma membrane | 11.28 | 4.58 |
| Zm00001d009962_P002 | Maize | mitochondrion, plastid | 1.95 | 2.55 |
Protein Annotations
| EnsemblPlants:Zm00001d026099_P002 | EnsemblPlants:Zm00001d026099_T002 | EnsemblPlantsGene:Zm00001d026099 | Gene3D:3.40.50.2000 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF360 |
| ProteinID:AQK45468.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0008423CD4 | UniProt:A0A1D6JC65 | MapMan:35.1 |
Description
Sas10/Utp3/C1D family
Coordinates
chr10:-:138485506..138488238
Molecular Weight (calculated)
28929.9 Da
IEP (calculated)
9.714
GRAVY (calculated)
-0.602
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLALVFFAL CTSVHGLVRG ENMELGRDSD TGGEVKYVVE LARAMSMMPG VYRVDLFTRQ VSSPDVDWSY DIMRRAKENR GLLLRQAAAA VRPSGVSSVV
101: QYVNQSSIGM NCDLILCLDR CRKEVVRRVK AAVAGLAIEN PYIKEIIDDD ADRPKDWKET VGDESKEFGR YMRQREEQEK QEVELFTRAP VTKHDKQIEK
201: LIRRQLHGLG GLTDGFGLGM NMLLGGDKED DGGSSKSHGK SGNRKKRPKN SKKRMRH
101: QYVNQSSIGM NCDLILCLDR CRKEVVRRVK AAVAGLAIEN PYIKEIIDDD ADRPKDWKET VGDESKEFGR YMRQREEQEK QEVELFTRAP VTKHDKQIEK
201: LIRRQLHGLG GLTDGFGLGM NMLLGGDKED DGGSSKSHGK SGNRKKRPKN SKKRMRH
0001: MAGNDWVNSY LEAILDVGQG LDDARSSPSL LLRERGRFTP SRYFVEEVIT GYDETDLHRS WVKAVATRSP QERNTRLENM CWRIWNLARQ KKQHEEKEAQ
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
Arabidopsis Description
SPS1Sucrose-phosphate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94BT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.