Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019592_P001 | Maize | nucleus | 24.47 | 94.19 |
| Zm00001d012087_P005 | Maize | nucleus | 90.33 | 90.06 |
| EES04083 | Sorghum | nucleus | 84.29 | 83.78 |
| TraesCS5D01G303800.1 | Wheat | nucleus | 68.28 | 69.11 |
| TraesCS5B01G296000.1 | Wheat | nucleus | 68.28 | 68.69 |
| TraesCS5A01G296700.1 | Wheat | nucleus | 67.67 | 68.5 |
| HORVU5Hr1G077970.1 | Barley | cytosol | 31.12 | 66.88 |
| HORVU3Hr1G067740.1 | Barley | cytosol | 19.64 | 63.73 |
| HORVU3Hr1G095480.13 | Barley | nucleus | 18.73 | 58.49 |
| HORVU5Hr1G078110.2 | Barley | nucleus, plastid | 67.07 | 57.81 |
| TraesCS3A01G436800.1 | Wheat | nucleus | 32.63 | 54.55 |
| PGSC0003DMT400024201 | Potato | cytosol | 38.67 | 49.23 |
| Zm00001d026099_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 38.07 | 49.03 |
| VIT_15s0046g02660.t01 | Wine grape | nucleus | 43.81 | 45.89 |
| AT1G07840.2 | Thale cress | nucleus | 43.2 | 45.83 |
| VIT_18s0001g07750.t01 | Wine grape | nucleus | 44.11 | 45.62 |
| CDX93614 | Canola | nucleus | 42.6 | 45.19 |
| Bra018680.1-P | Field mustard | nucleus | 42.3 | 45.16 |
| GSMUA_Achr4P33490_001 | Banana | nucleus | 46.22 | 45.13 |
| Solyc04g076560.2.1 | Tomato | nucleus | 42.6 | 45.05 |
| PGSC0003DMT400022451 | Potato | nucleus | 41.39 | 43.49 |
| KRH52980 | Soybean | nucleus | 40.79 | 42.59 |
| KRH62262 | Soybean | nucleus | 39.88 | 41.64 |
| CDX95119 | Canola | plastid | 42.6 | 37.7 |
| Zm00001d014256_P003 | Maize | cytosol | 27.19 | 35.16 |
| Zm00001d009962_P002 | Maize | mitochondrion, plastid | 14.8 | 25.0 |
| Zm00001d031326_P003 | Maize | plasma membrane | 20.54 | 10.74 |
Protein Annotations
| EMBL:BT037007 | EnsemblPlants:Zm00001d046836_P003 | EnsemblPlants:Zm00001d046836_T003 | EnsemblPlantsGene:Zm00001d046836 | EntrezGene:100216589 | InterPro:Sas10/Utp3/C1D |
| PANTHER:PTHR13237 | PANTHER:PTHR13237:SF7 | PFAM:PF04000 | ProteinID:AQL05102.1 | ProteinID:AQL05103.1 | ProteinID:AQL05104.1 |
| SEG:seg | UniParc:UPI00017B6F41 | UniProt:B4FIR9 | MapMan:35.2 | : | : |
Description
Sas10/Utp3/C1D family
Coordinates
chr9:+:108000755..108003545
Molecular Weight (calculated)
37403.5 Da
IEP (calculated)
9.083
GRAVY (calculated)
-1.000
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAASAAEAN SVSNDEFLVR DDVPGLLAAL KEMKDGLDLV RGKVEAITRK VKANQLPAGN GIGYLEAKNH MLLGYCQDIV YYLLRKTKGL SVDGHPVVRS
101: LVEIRLFLEK IRPIDKKAEY QIQKLTNAAD NATAREKAGN AEVKGKDGHS DEEDLLMYRP NPEMMDTKPG PDGQDTDGVY RPPKFMPTSM DDEEKRHKKD
201: SRRDKAIARV ATENPYIKEI IDDAADRPEE WKETVGDESR EFGRYMRQRE EQEKQEEELF TRAPVTKRDK QMEKRIRRQL HGLGGLTDGF DLGMNMLLGG
301: DKEDDGGSSK PHGKSGNRKK HLKSSKKRKR H
101: LVEIRLFLEK IRPIDKKAEY QIQKLTNAAD NATAREKAGN AEVKGKDGHS DEEDLLMYRP NPEMMDTKPG PDGQDTDGVY RPPKFMPTSM DDEEKRHKKD
201: SRRDKAIARV ATENPYIKEI IDDAADRPEE WKETVGDESR EFGRYMRQRE EQEKQEEELF TRAPVTKRDK QMEKRIRRQL HGLGGLTDGF DLGMNMLLGG
301: DKEDDGGSSK PHGKSGNRKK HLKSSKKRKR H
001: MEEITKPVLV GIVKKEAPQL ASVLREMKNV LDVVRSKVEA LTALVKANSF PTAGGISYLE AKHLLLLSYC QDLVYYILRK AKGLSIDGHP LVRSLVEIRM
101: FLEKIRPIDK KLQYQIQKLT TAGGPVTELA HSEGKGSCEA QKSEDLSNYK PKPDLLADKE DDQEDDGVYR PPKFAPMSME DKTSKQERDA ARKEKHFFRQ
201: ATENTYMKDV LDDLEDRPEE IRDYYGVESN EQKRFMAQYE RQQKAEEELF TRAPRTKEDK KREKRLKSSS GLHELTENFY DDIKFLDKDG EKPRSFGRNK
301: RGGPFKKRKT RH
101: FLEKIRPIDK KLQYQIQKLT TAGGPVTELA HSEGKGSCEA QKSEDLSNYK PKPDLLADKE DDQEDDGVYR PPKFAPMSME DKTSKQERDA ARKEKHFFRQ
201: ATENTYMKDV LDDLEDRPEE IRDYYGVESN EQKRFMAQYE RQQKAEEELF TRAPRTKEDK KREKRLKSSS GLHELTENFY DDIKFLDKDG EKPRSFGRNK
301: RGGPFKKRKT RH
Arabidopsis Description
AT1G07840 protein [Source:UniProtKB/TrEMBL;Acc:Q93ZQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.