Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G303800.1 | Wheat | nucleus | 82.55 | 96.94 |
| TraesCS5A01G296700.1 | Wheat | nucleus | 82.03 | 96.33 |
| TraesCS5B01G296000.1 | Wheat | nucleus | 79.95 | 93.31 |
| HORVU5Hr1G077970.1 | Barley | cytosol | 35.16 | 87.66 |
| HORVU3Hr1G095480.13 | Barley | nucleus | 20.57 | 74.53 |
| HORVU3Hr1G067740.1 | Barley | cytosol | 19.53 | 73.53 |
| Zm00001d046836_P003 | Maize | nucleus | 57.81 | 67.07 |
| EES04083 | Sorghum | nucleus | 57.29 | 66.07 |
| Zm00001d019592_P001 | Maize | nucleus | 14.58 | 65.12 |
| Zm00001d012087_P005 | Maize | nucleus | 55.99 | 64.76 |
| PGSC0003DMT400024201 | Potato | cytosol | 33.07 | 48.85 |
| CDX93614 | Canola | nucleus | 38.8 | 47.76 |
| Bra018680.1-P | Field mustard | nucleus | 38.28 | 47.42 |
| AT1G07840.2 | Thale cress | nucleus | 38.02 | 46.79 |
| GSMUA_Achr4P33490_001 | Banana | nucleus | 41.15 | 46.61 |
| VIT_15s0046g02660.t01 | Wine grape | nucleus | 38.02 | 46.2 |
| Solyc04g076560.2.1 | Tomato | nucleus | 36.72 | 45.05 |
| VIT_18s0001g07750.t01 | Wine grape | nucleus | 37.5 | 45.0 |
| PGSC0003DMT400022451 | Potato | nucleus | 36.2 | 44.13 |
| KRH52980 | Soybean | nucleus | 35.16 | 42.59 |
| KRH62262 | Soybean | nucleus | 34.64 | 41.96 |
| CDX95119 | Canola | plastid | 40.36 | 41.44 |
| Zm00001d026099_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 24.74 | 36.97 |
| HORVU7Hr1G092560.2 | Barley | mitochondrion | 17.19 | 10.05 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G078110.2 | EnsemblPlantsGene:HORVU5Hr1G078110 | InterPro:Sas10/Utp3/C1D | ncoils:Coil | PANTHER:PTHR13237 | PANTHER:PTHR13237:SF7 |
| PFAM:PF04000 | SEG:seg | UniParc:UPI000B47631E | UniProt:A0A287RWY8 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr5H:+:554465178..554468746
Molecular Weight (calculated)
42689.9 Da
IEP (calculated)
9.545
GRAVY (calculated)
-0.884
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: QPNPAAPSSG RPHSPLPSGA LLRSATAPAP GGSCARAAAP YRRPPGLSPS RAGRETAMTA TVAGADDDRK AQALVRDDAP KLLAALKEMK DGLDLVRSKV
101: ESLTRKVRKN QLPTGDGIGY LEAKHHLLLS YCQDLVYYLL RKANGLSVDG HPVVRSLVEI RLFLEKIRPI DKKMEYQIQK LTNAADGAAA QDKVPDAEVN
201: VKGRQQGEDD LLGYRPNPDM MDPKIVPEGQ GKDGIYVPPR IGPAAMDDSH SKDAVRKEKR LLRMATENPY FKEMIDDAAD RPEEWKETAG DESKEFMAYM
301: RQREKQEKAE EELFTRAPVT KREKYMEKQM KKQLHGLQGL TDGFDLGMNT LLDGEKEEDG DSIEPRRQSA GHRKHQKGGK RKRH
101: ESLTRKVRKN QLPTGDGIGY LEAKHHLLLS YCQDLVYYLL RKANGLSVDG HPVVRSLVEI RLFLEKIRPI DKKMEYQIQK LTNAADGAAA QDKVPDAEVN
201: VKGRQQGEDD LLGYRPNPDM MDPKIVPEGQ GKDGIYVPPR IGPAAMDDSH SKDAVRKEKR LLRMATENPY FKEMIDDAAD RPEEWKETAG DESKEFMAYM
301: RQREKQEKAE EELFTRAPVT KREKYMEKQM KKQLHGLQGL TDGFDLGMNT LLDGEKEEDG DSIEPRRQSA GHRKHQKGGK RKRH
001: MEEITKPVLV GIVKKEAPQL ASVLREMKNV LDVVRSKVEA LTALVKANSF PTAGGISYLE AKHLLLLSYC QDLVYYILRK AKGLSIDGHP LVRSLVEIRM
101: FLEKIRPIDK KLQYQIQKLT TAGGPVTELA HSEGKGSCEA QKSEDLSNYK PKPDLLADKE DDQEDDGVYR PPKFAPMSME DKTSKQERDA ARKEKHFFRQ
201: ATENTYMKDV LDDLEDRPEE IRDYYGVESN EQKRFMAQYE RQQKAEEELF TRAPRTKEDK KREKRLKSSS GLHELTENFY DDIKFLDKDG EKPRSFGRNK
301: RGGPFKKRKT RH
101: FLEKIRPIDK KLQYQIQKLT TAGGPVTELA HSEGKGSCEA QKSEDLSNYK PKPDLLADKE DDQEDDGVYR PPKFAPMSME DKTSKQERDA ARKEKHFFRQ
201: ATENTYMKDV LDDLEDRPEE IRDYYGVESN EQKRFMAQYE RQQKAEEELF TRAPRTKEDK KREKRLKSSS GLHELTENFY DDIKFLDKDG EKPRSFGRNK
301: RGGPFKKRKT RH
Arabidopsis Description
AT1G07840 protein [Source:UniProtKB/TrEMBL;Acc:Q93ZQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.