Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019592_P001 | Maize | nucleus | 13.28 | 39.53 |
| Zm00001d026099_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 33.2 | 33.07 |
| Zm00001d012087_P005 | Maize | nucleus | 35.55 | 27.41 |
| Zm00001d046836_P003 | Maize | nucleus | 35.16 | 27.19 |
| TraesCS5D01G407900.1 | Wheat | mitochondrion, nucleus | 7.42 | 7.25 |
| Zm00001d031326_P003 | Maize | plasma membrane | 11.33 | 4.58 |
| Zm00001d009962_P002 | Maize | mitochondrion, plastid | 2.73 | 3.57 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A1D6GRA2 | ProteinID:AQK65634.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006629 | GO:GO:0006661 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043550 | GO:GO:0070772 | PANTHER:PTHR16023 |
| UniParc:UPI0008432F2F | InterPro:Vac14 | EnsemblPlantsGene:Zm00001d014256 | EnsemblPlants:Zm00001d014256_P003 | EnsemblPlants:Zm00001d014256_T003 | SEG:seg |
Description
Sas10/Utp3/C1D family
Coordinates
chr5:-:38434379..38446001
Molecular Weight (calculated)
28709.0 Da
IEP (calculated)
5.941
GRAVY (calculated)
-0.535
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MAADALSTIP GAVLRNLSDK LYEKRKNAAL EIEGIVKQLA MAGEHERISA VISLLTNNFT YSPQTNHRKG GLIGLAAVTV GLTSEAAQHL EVDSTPLTPL
101: QDTHWTGPLE FFVMHAEENR GLLSASSFDR QQLRKEVVRR VKAAAAGLAI ENPYIKEIID DDADRPKEWK ETVGDESREF GRYMRQREEQ EKQEAELFTR
201: APVTKHDKQI EKRIRRQLHG RTGLTEECSA GSRFDLALED IAEGKVTVQE AINPFF
101: QDTHWTGPLE FFVMHAEENR GLLSASSFDR QQLRKEVVRR VKAAAAGLAI ENPYIKEIID DDADRPKEWK ETVGDESREF GRYMRQREEQ EKQEAELFTR
201: APVTKHDKQI EKRIRRQLHG RTGLTEECSA GSRFDLALED IAEGKVTVQE AINPFF
001: MSDALSAIPA AVHRNLSDKL YEKRKNAALE LENIVKNLTS SGDHDKISKV IEMLIKEFAK SPQANHRKGG LIGLAAVTVG LSTEAAQYLE QIVPPVINSF
101: SDQDSRVRYY ACEALYNIAK VVRGDFIIFF NKIFDALCKL SADSDANVQS AAHLLDRLVK QDIVTESDQF SIEEFIPLLK ERMNVLNPYV RQFLVGWITV
201: LDSVPDIDML GFLPDFLDGL FNMLSDSSHE IRQQADSALS EFLQEIKNSP SVDYGRMAEI LVQRAASPDE FTRLTAITWI NEFVKLGGDQ LVRYYADILG
301: AILPCISDKE EKIRVVARET NEELRSIHVE PSDGFDVGAI LSVARRQLSS EFEATRIEAL NWISTLLNKH RTEVLCFLND IFDTLLKALS DSSDDVVLLV
401: LEVHAGVAKD PQHFRQLIVF LVHNFRADNS LLERRGALIV RRMCVLLDAE RVYRELSTIL EGEDNLDFAS TMVQALNLIL LTSPELSKLR ELLKGSLVNR
501: EGKELFVALY TSWCHSPMAI ISLCLLAQAY QHASVVIQSL VEEDINVKFL VQLDKLIRLL ETPIFTYLRL QLLEPGRYTW LLKTLYGLLM LLPQQSAAFK
601: ILRTRLKTVP TYSFSTGNQI GRATSGVPFS QYKHQNEDGD LEDDNINSSH QGINFAVRLQ QFENVQNLHR GQARTRVNYS YHSSSSSTSK EVRRSEEQQQ
701: QQQQQQQQQQ QQQRPPPSST SSSVADNNRP PSRTSRKGPG QLQL
101: SDQDSRVRYY ACEALYNIAK VVRGDFIIFF NKIFDALCKL SADSDANVQS AAHLLDRLVK QDIVTESDQF SIEEFIPLLK ERMNVLNPYV RQFLVGWITV
201: LDSVPDIDML GFLPDFLDGL FNMLSDSSHE IRQQADSALS EFLQEIKNSP SVDYGRMAEI LVQRAASPDE FTRLTAITWI NEFVKLGGDQ LVRYYADILG
301: AILPCISDKE EKIRVVARET NEELRSIHVE PSDGFDVGAI LSVARRQLSS EFEATRIEAL NWISTLLNKH RTEVLCFLND IFDTLLKALS DSSDDVVLLV
401: LEVHAGVAKD PQHFRQLIVF LVHNFRADNS LLERRGALIV RRMCVLLDAE RVYRELSTIL EGEDNLDFAS TMVQALNLIL LTSPELSKLR ELLKGSLVNR
501: EGKELFVALY TSWCHSPMAI ISLCLLAQAY QHASVVIQSL VEEDINVKFL VQLDKLIRLL ETPIFTYLRL QLLEPGRYTW LLKTLYGLLM LLPQQSAAFK
601: ILRTRLKTVP TYSFSTGNQI GRATSGVPFS QYKHQNEDGD LEDDNINSSH QGINFAVRLQ QFENVQNLHR GQARTRVNYS YHSSSSSTSK EVRRSEEQQQ
701: QQQQQQQQQQ QQQRPPPSST SSSVADNNRP PSRTSRKGPG QLQL
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IPA6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.