Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93612 | Canola | cytosol | 100.0 | 100.0 |
| CDX95118 | Canola | nucleus, peroxisome, plasma membrane, plastid | 99.76 | 78.21 |
| Bra018680.1-P | Field mustard | nucleus | 5.94 | 8.06 |
| Bra037695.1-P | Field mustard | nucleus | 4.04 | 6.85 |
| Bra000317.1-P | Field mustard | nucleus | 4.28 | 2.76 |
Protein Annotations
| EnsemblPlants:Bra018679.1 | EnsemblPlants:Bra018679.1-P | EnsemblPlantsGene:Bra018679 | Gene3D:3.90.550.50 | InterPro:DUF604 | PANTHER:PTHR10811 |
| PANTHER:PTHR10811:SF27 | PFAM:PF04646 | SEG:seg | UniParc:UPI000253EDE7 | UniProt:M4DQ86 | MapMan:35.2 |
Description
AT1G07850 (E=1e-231) | transferase, transferring glycosyl groups
Coordinates
chrA06:+:2646610..2649150
Molecular Weight (calculated)
48735.5 Da
IEP (calculated)
9.882
GRAVY (calculated)
-0.343
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MFNTTLDHVV FGIAASSVLW ETRKEYIKSW WRPGKTRGVV WIDKRVRTYR NEPLPQIRIS QDTSRFRYTH PVGDRSAVRI SRVVTETLRL GLKGVRWFVM
101: GDDDTVFVVD NVVNVLSKYD HTQFYYVGSS SEAHVQNIFF SYSMAFGGGG FAISYALAVE LSKMQDRCIQ RYPGLYGSDD RIQACMTELG VPLTKEPGFH
201: QYDVYGDLLG LLGAHPVAPL VTLHHIDVVQ PIFPKMKRSR ALRHLMSSAE LDSASIFQQS ICYDQSRFWS ISVSWGFSVQ IIRGIISPRE LEMPSRTFLN
301: WFRRADYIGY AFNTRPVSRH PCQRPFVFYV NSAKYDEGRR QVIGYYNLDK TRRFPGCRWR LDSPGKIDSV VVLKRPDPLR WHKSPRRDCC RVLPSRRNTT
401: MYIWVGNCAD GEISELEHPK Q
101: GDDDTVFVVD NVVNVLSKYD HTQFYYVGSS SEAHVQNIFF SYSMAFGGGG FAISYALAVE LSKMQDRCIQ RYPGLYGSDD RIQACMTELG VPLTKEPGFH
201: QYDVYGDLLG LLGAHPVAPL VTLHHIDVVQ PIFPKMKRSR ALRHLMSSAE LDSASIFQQS ICYDQSRFWS ISVSWGFSVQ IIRGIISPRE LEMPSRTFLN
301: WFRRADYIGY AFNTRPVSRH PCQRPFVFYV NSAKYDEGRR QVIGYYNLDK TRRFPGCRWR LDSPGKIDSV VVLKRPDPLR WHKSPRRDCC RVLPSRRNTT
401: MYIWVGNCAD GEISELEHPK Q
001: MGNSSSSNTN LSNPKNILLE DHHHQRNQAQ NHSNSARTSH LSFLRSPLPW LFIFLFFLPL LLISTTGGGG SRKTCRPSSS TYSHLSLVDK ANSSSSVVPE
101: EEDDDVPPRV PALYPQRPRM FNTTLDHIVF GIAASSVLWE TRKEYIKSWW RPGKTRGVVW IDKRVRTYRN DPLPEIRISQ DTSRFRYTHP VGDRSAVRIS
201: RVVTETLRLG KKGVRWFVMG DDDTVFVVDN VVNVLSKYDH TQFYYVGSSS EAHVQNIFFS YSMAFGGGGF AISYALALEL LRMQDRCIQR YPGLYGSDDR
301: IQACMTELGV PLTKEPGFHQ YDVYGDLLGL LGAHPVAPLV SLHHIDVVQP IFPKMKRSRA LRHLMSSAVL DPASIFQQSI CYDQNRFWSI SVSWGFVVQI
401: IRGIISPREL EMPSRTFLNW FRKADYIGYA FNTRPVSRHP CQRPFVFYLN SAKYDEGRRQ VIGYYNLDKT RRIPGCRWRL DSPGKIDSVV VLKRPDPLRW
501: HKSPRRDCCR VLPSRRNQTM YIWVGNCADG EISELEHPQQ H
101: EEDDDVPPRV PALYPQRPRM FNTTLDHIVF GIAASSVLWE TRKEYIKSWW RPGKTRGVVW IDKRVRTYRN DPLPEIRISQ DTSRFRYTHP VGDRSAVRIS
201: RVVTETLRLG KKGVRWFVMG DDDTVFVVDN VVNVLSKYDH TQFYYVGSSS EAHVQNIFFS YSMAFGGGGF AISYALALEL LRMQDRCIQR YPGLYGSDDR
301: IQACMTELGV PLTKEPGFHQ YDVYGDLLGL LGAHPVAPLV SLHHIDVVQP IFPKMKRSRA LRHLMSSAVL DPASIFQQSI CYDQNRFWSI SVSWGFVVQI
401: IRGIISPREL EMPSRTFLNW FRKADYIGYA FNTRPVSRHP CQRPFVFYLN SAKYDEGRRQ VIGYYNLDKT RRIPGCRWRL DSPGKIDSVV VLKRPDPLRW
501: HKSPRRDCCR VLPSRRNQTM YIWVGNCADG EISELEHPQQ H
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4HSH8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.