CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46231	Soybean	nucleus	56.67	48.97
KRG98705	Soybean	nucleus	55.48	48.74
KRG89544	Soybean	nucleus	16.19	41.72
VIT_19s0090g00840.t01	Wine grape	nucleus	44.52	33.94
KRH02033	Soybean	nucleus	36.9	31.7
KRH51128	Soybean	nucleus, plastid	38.57	31.33
KRH38314	Soybean	nucleus	17.86	30.99
KRH19450	Soybean	nucleus	28.1	30.81
KRH36485	Soybean	nucleus	38.81	30.13
KRH02502	Soybean	nucleus	27.86	29.92
KRH11472	Soybean	nucleus	38.33	28.9
TraesCSU01G001200.1	Wheat	nucleus	39.29	28.35
TraesCS1D01G412500.1	Wheat	nucleus	39.52	28.09
KRH22585	Soybean	nucleus	40.48	27.69
KRH42243	Soybean	nucleus	11.67	27.07
KRH25355	Soybean	nucleus	39.52	27.04
KRH23643	Soybean	nucleus	19.76	26.86
KRH44560	Soybean	nucleus	20.0	26.84
KRG96611	Soybean	nucleus	32.86	26.74
KRH33656	Soybean	nucleus	30.71	26.71
KRH47344	Soybean	nucleus	19.76	26.69
KRH12664	Soybean	nucleus	28.57	26.61
KRH69145	Soybean	nucleus	30.48	26.45
TraesCS1B01G434300.1	Wheat	nucleus	39.05	26.2
KRH37650	Soybean	nucleus	28.1	25.76
KRH15674	Soybean	nucleus	16.9	25.18
KRH56160	Soybean	nucleus	37.62	25.16
KXG22547	Sorghum	nucleus	37.14	24.72
KRH61669	Soybean	nucleus	12.86	24.55
KRH68345	Soybean	endoplasmic reticulum, vacuole	31.43	24.4
KRH09652	Soybean	nucleus	19.05	24.24
KRG93506	Soybean	nucleus	28.1	24.08
KRH05350	Soybean	nucleus	17.86	24.04
Zm00001d009595_P001	Maize	nucleus	34.76	23.93
Zm00001d039044_P001	Maize	nucleus	34.76	23.25
KRH33270	Soybean	nucleus	16.43	22.62
Os05t0567200-00	Rice	nucleus	30.71	21.98
KRH56941	Soybean	nucleus	28.33	21.29
KRH54838	Soybean	cytosol, nucleus	11.9	21.28
KRH61668	Soybean	nucleus	11.9	21.28
KRH03442	Soybean	nucleus	29.76	20.83
KRH63398	Soybean	nucleus	25.71	20.34
KRH05362	Soybean	nucleus	13.33	20.14
KRH74791	Soybean	nucleus	24.29	20.04
KRG99150	Soybean	nucleus	24.76	19.66
KRH69334	Soybean	nucleus	24.52	19.54
KRH15655	Soybean	nucleus	12.86	19.42
KRH58361	Soybean	nucleus	22.38	19.38
KRH52329	Soybean	nucleus	13.81	18.77
KRH01137	Soybean	nucleus	24.05	18.67
KRH54509	Soybean	nucleus	27.14	18.54
KRH40121	Soybean	nucleus	23.57	18.3

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A0R0LA20	EMBL:ACUP02001288	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G293400
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	EnsemblPlants:KRH73787	ProteinID:KRH73787	ProteinID:KRH73787.1	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31429	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0006EDE946	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:47204183..47206522

Molecular Weight (calculated)

46039.1 Da

IEP (calculated)

6.019

GRAVY (calculated)

-0.579

Length

420 amino acids

Sequence
(BLAST)

001: MEPTWNDAIV NVSNSSDPIM SFRGTPLVMD ELDFFAQKRK VSANDDDHQR VEDLHVDTSL DLLTKNDTDV NNRSTEEDAA LETMDDKSNE VNNNCNTLRM
101: QLVKLTQKHH SHGNNGVIGE KEDMVPRSFL DIGVAEKDEP NSQQSSEGKL RESKSMVELG HGKDIAVLEA YKLDSTAGRE STKARMEGRQ ISTEQEFSNK
201: VPRLDPASET MSMIKKARVS VRAKSYSSMI ADGCQWRKYG QKMAKGNPWP RAYYRCTMST GCPVRKQVQR CAEDRSVLIT TYEGQHNHPL PPTTSVAASM
301: PSILESASLP CSRNMATLSA SAPFPTITLD LTQNATNSSQ LQRELPLGQL GLLSPLLAHK FMSVPKIFGQ GMDTNSSFAN ILNAATADPN FTAALVAAIT
401: SVMGTSHSNT NATNSTSGDE

Best Arabidopsis Sequence Match ( AT1G62300.1 )
(BLAST)

001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ

Arabidopsis Description

WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.