Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09652 | Soybean | nucleus | 91.26 | 85.45 |
| KRH47344 | Soybean | nucleus | 77.02 | 76.53 |
| KRH44560 | Soybean | nucleus | 76.7 | 75.72 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 65.7 | 65.27 |
| Bra008435.1-P | Field mustard | nucleus | 54.05 | 57.59 |
| CDY22299 | Canola | nucleus | 54.05 | 57.59 |
| CDX88573 | Canola | nucleus | 55.99 | 57.48 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 35.6 | 57.29 |
| CDY67287 | Canola | nucleus | 53.72 | 57.24 |
| Bra035148.1-P | Field mustard | nucleus | 55.02 | 56.67 |
| CDX87347 | Canola | nucleus | 55.02 | 56.67 |
| AT1G80840.1 | Thale cress | nucleus | 55.34 | 56.62 |
| Bra003588.1-P | Field mustard | nucleus | 54.37 | 56.57 |
| CDX67971 | Canola | nucleus | 54.37 | 56.57 |
| CDX79347 | Canola | nucleus | 54.37 | 56.38 |
| Solyc03g116890.2.1 | Tomato | nucleus | 60.52 | 53.43 |
| PGSC0003DMT400051047 | Potato | nucleus | 60.19 | 52.39 |
| PGSC0003DMT400073396 | Potato | nucleus | 58.9 | 50.56 |
| GSMUA_Achr10P... | Banana | nucleus | 37.54 | 50.0 |
| Solyc06g068460.2.1 | Tomato | nucleus | 58.25 | 50.0 |
| KRH15674 | Soybean | nucleus | 44.98 | 49.29 |
| KRH61669 | Soybean | nucleus | 34.95 | 49.09 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 36.57 | 48.09 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 29.45 | 47.89 |
| GSMUA_Achr11P... | Banana | nucleus | 37.86 | 47.76 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 40.78 | 45.82 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 25.24 | 44.83 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 40.45 | 44.64 |
| KRH05350 | Soybean | nucleus | 44.34 | 43.91 |
| GSMUA_Achr10P... | Banana | nucleus | 40.13 | 43.06 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 38.84 | 41.52 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 29.13 | 40.36 |
| Zm00001d053746_P001 | Maize | nucleus | 40.78 | 39.25 |
| Os09t0417600-02 | Rice | nucleus | 41.1 | 38.84 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 41.1 | 38.84 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 41.1 | 38.6 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 40.45 | 38.34 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 39.48 | 38.24 |
| Zm00001d020492_P001 | Maize | nucleus | 37.22 | 38.08 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 40.13 | 38.04 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 39.81 | 37.96 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 40.13 | 37.92 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 40.78 | 37.61 |
| KRH52329 | Soybean | nucleus | 37.54 | 37.54 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 39.81 | 37.5 |
| Os06t0649000-01 | Rice | nucleus | 40.78 | 37.39 |
| EER98905 | Sorghum | nucleus, plastid | 39.48 | 37.31 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 38.84 | 37.27 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 39.48 | 36.86 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 39.48 | 36.86 |
| Zm00001d046805_P001 | Maize | nucleus | 41.42 | 36.47 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 38.84 | 36.36 |
| EER90124 | Sorghum | nucleus | 40.13 | 36.26 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 38.84 | 36.25 |
| Zm00001d036726_P001 | Maize | nucleus | 40.13 | 36.05 |
| Zm00001d015515_P001 | Maize | nucleus | 40.45 | 36.02 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 33.33 | 35.64 |
| Os02t0181300-01 | Rice | nucleus | 40.13 | 35.63 |
| EES04642 | Sorghum | nucleus | 41.75 | 35.44 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 40.13 | 35.43 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 31.07 | 35.42 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 39.81 | 35.34 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 40.13 | 35.13 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 39.48 | 35.06 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 40.13 | 34.93 |
| KRH61668 | Soybean | nucleus | 26.54 | 34.89 |
| EER88729 | Sorghum | nucleus | 39.16 | 34.77 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 30.1 | 34.32 |
| Zm00001d020495_P001 | Maize | nucleus | 29.13 | 33.83 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 39.81 | 33.15 |
| TraesCS7D01G497300.1 | Wheat | plastid | 39.81 | 33.06 |
| KXG35639 | Sorghum | nucleus | 31.39 | 32.88 |
| KRH05362 | Soybean | nucleus | 29.13 | 32.37 |
| KRH15655 | Soybean | nucleus | 29.13 | 32.37 |
| Zm00001d005749_P001 | Maize | nucleus | 36.25 | 31.91 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 39.16 | 30.95 |
| Os09t0417800-01 | Rice | nucleus | 31.72 | 30.82 |
| KRH54838 | Soybean | cytosol, nucleus | 23.3 | 30.64 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 40.13 | 30.54 |
| KRG89544 | Soybean | nucleus | 15.53 | 29.45 |
| KRH19450 | Soybean | nucleus | 27.51 | 22.19 |
| KRH38314 | Soybean | nucleus | 17.15 | 21.9 |
| KRH02502 | Soybean | nucleus | 27.51 | 21.74 |
| KRH42243 | Soybean | nucleus | 12.3 | 20.99 |
| KRH02033 | Soybean | nucleus | 31.72 | 20.04 |
| KRH36485 | Soybean | nucleus | 34.63 | 19.78 |
| KRH73787 | Soybean | nucleus | 26.86 | 19.76 |
| KRH46231 | Soybean | nucleus | 30.42 | 19.34 |
| KRH51128 | Soybean | nucleus, plastid | 32.04 | 19.15 |
| KRH33656 | Soybean | nucleus | 29.77 | 19.05 |
| KRH11472 | Soybean | nucleus | 33.98 | 18.85 |
| KRG98705 | Soybean | nucleus | 28.48 | 18.41 |
| KRH69145 | Soybean | nucleus | 28.8 | 18.39 |
| KRG96611 | Soybean | nucleus | 30.1 | 18.02 |
| KRG93506 | Soybean | nucleus | 28.48 | 17.96 |
| KRH68345 | Soybean | endoplasmic reticulum, vacuole | 31.07 | 17.74 |
| KRH12664 | Soybean | nucleus | 25.89 | 17.74 |
| KRH63398 | Soybean | nucleus | 30.1 | 17.51 |
| KRH37650 | Soybean | nucleus | 25.89 | 17.47 |
| KRH56160 | Soybean | nucleus | 34.3 | 16.88 |
| KRH25355 | Soybean | nucleus | 33.33 | 16.78 |
| KRH56941 | Soybean | nucleus | 29.77 | 16.46 |
| KRH22585 | Soybean | nucleus | 31.39 | 15.8 |
| KRH58361 | Soybean | nucleus | 24.6 | 15.67 |
| KRH03442 | Soybean | nucleus | 30.42 | 15.67 |
| KRH33270 | Soybean | nucleus | 15.21 | 15.41 |
| KRH74791 | Soybean | nucleus | 25.24 | 15.32 |
| KRG99150 | Soybean | nucleus | 25.89 | 15.12 |
| KRH54509 | Soybean | nucleus | 30.1 | 15.12 |
| KRH01137 | Soybean | nucleus | 25.89 | 14.79 |
| KRH69334 | Soybean | nucleus | 24.92 | 14.61 |
| KRH40121 | Soybean | nucleus | 25.57 | 14.6 |
Protein Annotations
| EntrezGene:100798375 | MapMan:15.5.22 | Gene3D:2.20.25.80 | EMBL:ACUP02008482 | ncoils:Coil | EnsemblPlantsGene:GLYMA_13G370100 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | UniProt:I1M5Y6 |
| InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlants:KRH23643 | ProteinID:KRH23643 | ProteinID:KRH23643.1 | PFAM:PF03106 |
| PFscan:PS50811 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000233B818 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:45564565..45566732
Molecular Weight (calculated)
34594.7 Da
IEP (calculated)
8.936
GRAVY (calculated)
-0.884
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYSSWMINT SLDLNINPHR LHEELPKKEV ENNFLSLNLE VKKSSVKQES AGALAEELKR VSAENKKLTE MLTEMCENYN TLRGNLMEYM RKNPDKEHSS
101: SKKRKSESNN NSIPMGVNGT SESSSTDEES CKKQKEDIKT KISRVYMRTE ASDKSLIVKD GYQWRKYGQK VTRDNPSPRA YFKCSFAPSC PVKKKVQRSV
201: DDQSVLVATY EGEHNHPHPS QMEVTTGSNR CMTLGSVPCS ASLSSSPPTA TLDWTKSKSS SESKNTSPKT ESPEVPQVLV EQMATSLTKD PNFRAALVAA
301: ISGKMLHNN
101: SKKRKSESNN NSIPMGVNGT SESSSTDEES CKKQKEDIKT KISRVYMRTE ASDKSLIVKD GYQWRKYGQK VTRDNPSPRA YFKCSFAPSC PVKKKVQRSV
201: DDQSVLVATY EGEHNHPHPS QMEVTTGSNR CMTLGSVPCS ASLSSSPPTA TLDWTKSKSS SESKNTSPKT ESPEVPQVLV EQMATSLTKD PNFRAALVAA
301: ISGKMLHNN
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.