Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG35639 | Sorghum | nucleus | 78.2 | 70.51 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 35.71 | 54.6 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 53.01 | 52.03 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 52.26 | 51.29 |
| Os09t0417800-01 | Rice | nucleus | 55.64 | 46.54 |
| Solyc12g042590.1.1 | Tomato | nucleus | 29.32 | 36.11 |
| Zm00001d020492_P001 | Maize | nucleus | 40.98 | 36.09 |
| Bra019123.1-P | Field mustard | nucleus | 26.32 | 36.08 |
| PGSC0003DMT400073710 | Potato | nucleus | 29.32 | 35.94 |
| KRH61669 | Soybean | nucleus | 26.32 | 31.82 |
| KRH44560 | Soybean | nucleus | 36.09 | 30.67 |
| Solyc08g067340.2.1 | Tomato | nucleus | 28.95 | 30.43 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 31.95 | 30.36 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 35.34 | 30.23 |
| PGSC0003DMT400019061 | Potato | nucleus | 28.57 | 30.04 |
| CDX75196 | Canola | nucleus | 31.95 | 30.04 |
| KRH47344 | Soybean | nucleus | 34.96 | 29.9 |
| CDX79347 | Canola | nucleus | 33.46 | 29.87 |
| CDY22299 | Canola | nucleus | 32.33 | 29.66 |
| CDY67287 | Canola | nucleus | 32.33 | 29.66 |
| Bra008435.1-P | Field mustard | nucleus | 32.33 | 29.66 |
| KRH15674 | Soybean | nucleus | 31.2 | 29.43 |
| Zm00001d005749_P001 | Maize | nucleus | 38.72 | 29.34 |
| KRH23643 | Soybean | nucleus | 33.83 | 29.13 |
| CDX87347 | Canola | nucleus | 32.71 | 29.0 |
| Bra035148.1-P | Field mustard | nucleus | 32.71 | 29.0 |
| CDX67971 | Canola | nucleus | 32.33 | 28.96 |
| Bra003588.1-P | Field mustard | nucleus | 32.33 | 28.96 |
| CDX88573 | Canola | nucleus | 32.71 | 28.9 |
| AT1G80840.1 | Thale cress | nucleus | 32.71 | 28.81 |
| CDX72327 | Canola | nucleus | 30.83 | 28.77 |
| PGSC0003DMT400019058 | Potato | nucleus | 28.2 | 28.74 |
| Solyc08g067360.2.1 | Tomato | nucleus | 27.82 | 28.68 |
| CDY39879 | Canola | nucleus | 32.33 | 28.01 |
| Bra010220.1-P | Field mustard | nucleus | 32.33 | 27.92 |
| AT4G31800.1 | Thale cress | nucleus | 32.33 | 27.74 |
| Zm00001d053746_P001 | Maize | nucleus | 33.46 | 27.73 |
| AT2G25000.1 | Thale cress | nucleus | 28.2 | 27.68 |
| Zm00001d036726_P001 | Maize | nucleus | 35.34 | 27.33 |
| KRH09652 | Soybean | nucleus | 33.46 | 26.97 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 31.95 | 26.81 |
| Bra011299.1-P | Field mustard | nucleus | 31.95 | 26.81 |
| Zm00001d046805_P001 | Maize | nucleus | 35.34 | 26.78 |
| CDX68787 | Canola | nucleus | 31.95 | 26.65 |
| Zm00001d015515_P001 | Maize | nucleus | 34.21 | 26.22 |
| KRH05350 | Soybean | nucleus | 30.45 | 25.96 |
| KRH52329 | Soybean | nucleus | 29.32 | 25.24 |
| PGSC0003DMT400073396 | Potato | nucleus | 33.83 | 25.0 |
| Solyc06g068460.2.1 | Tomato | nucleus | 33.83 | 25.0 |
| Solyc03g116890.2.1 | Tomato | nucleus | 32.33 | 24.57 |
| PGSC0003DMT400051047 | Potato | nucleus | 32.33 | 24.23 |
| Bra023983.1-P | Field mustard | nucleus | 30.45 | 23.48 |
| CDY70096 | Canola | nucleus | 30.45 | 23.48 |
| Zm00001d011237_P001 | Maize | nucleus | 18.05 | 16.11 |
| Zm00001d045375_P001 | Maize | nucleus | 13.16 | 14.0 |
| Zm00001d008190_P001 | Maize | nucleus | 24.81 | 13.02 |
| Zm00001d040554_P001 | Maize | nucleus | 28.2 | 12.91 |
| Zm00001d039245_P001 | Maize | nucleus | 24.44 | 12.01 |
| Zm00001d024768_P001 | Maize | nucleus | 24.44 | 11.88 |
| Zm00001d008794_P001 | Maize | nucleus | 23.68 | 11.67 |
| Zm00001d039532_P001 | Maize | nucleus | 23.31 | 11.33 |
| Zm00001d009595_P001 | Maize | nucleus | 25.19 | 10.98 |
| Zm00001d039044_P001 | Maize | nucleus | 25.19 | 10.67 |
| Zm00001d018203_P001 | Maize | nucleus | 22.18 | 10.19 |
Protein Annotations
| EntrezGene:100281244 | MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:B6STM4 | EMBL:EU956089 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009617 |
| GO:GO:0009620 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0043565 |
| GO:GO:1900425 | InterPro:IPR003657 | InterPro:IPR036576 | EMBL:KJ728199 | ProteinID:ONM55011.1 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF36 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000182B7AF |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | EnsemblPlantsGene:Zm00001d020495 | EnsemblPlants:Zm00001d020495_P001 | EnsemblPlants:Zm00001d020495_T001 | SEG:seg |
Description
WRKY-transcription factor 104WRKY62-superfamily of TFs having WRKY and zinc finger domains
Coordinates
chr7:-:118963352..118964584
Molecular Weight (calculated)
28960.1 Da
IEP (calculated)
7.020
GRAVY (calculated)
-0.491
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSNGECSSP PTLSAALLPL FGPPPEPLPE SLEDKLRRVS EENRRLAAAL DAILADRSTP RALATSSPSR GNAVAAAEPP RPKVRTVCAR AEPSDADANH
101: LRDCYQWRKY GQKVTRDNPY PRSYFRCAYA PSCPVKKKVQ RSADDNLMLV ATYEGEHNHE QRAQSEYVVT DASTSLHQAG SSLPRSIISI DSSGRKKITI
201: GLAADQRPPA DSNAGAAVGE IIVTPEFRKA LVDELVNLLT NDSEFVEKLA SAVADRVMER IPGHIF
101: LRDCYQWRKY GQKVTRDNPY PRSYFRCAYA PSCPVKKKVQ RSADDNLMLV ATYEGEHNHE QRAQSEYVVT DASTSLHQAG SSLPRSIISI DSSGRKKITI
201: GLAADQRPPA DSNAGAAVGE IIVTPEFRKA LVDELVNLLT NDSEFVEKLA SAVADRVMER IPGHIF
001: MLARVCESYN ELHNHLEKLQ SRQSPEIEQT DIPIKKRKQD PDEFLGFPIG LSSGKTENSS SNEDHHHHHQ QHEQKNQLLS CKRPVTDSFN KAKVSTVYVP
101: TETSDTSLTV KDGFQWRKYG QKVTRDNPSP RAYFRCSFAP SCPVKKKVQR SAEDPSLLVA TYEGTHNHLG PNASEGDATS QGGSSTVTLD LVNGCHRLAL
201: EKNERDNTMQ EVLIQQMASS LTKDSKFTAA LAAAISGRLM EQSRT
101: TETSDTSLTV KDGFQWRKYG QKVTRDNPSP RAYFRCSFAP SCPVKKKVQR SAEDPSLLVA TYEGTHNHLG PNASEGDATS QGGSSTVTLD LVNGCHRLAL
201: EKNERDNTMQ EVLIQQMASS LTKDSKFTAA LAAAISGRLM EQSRT
Arabidopsis Description
WRKY18WRKY like transcription factor [Source:UniProtKB/TrEMBL;Acc:Q0WTZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.