Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00609 | Sorghum | nucleus | 71.6 | 62.37 |
| Zm00001d040554_P001 | Maize | nucleus | 69.63 | 60.76 |
| Os01t0289600-00 | Rice | nucleus, plastid | 43.59 | 53.77 |
| GSMUA_Achr2P18390_001 | Banana | nucleus | 30.18 | 41.69 |
| Zm00001d024768_P001 | Maize | nucleus | 42.21 | 39.12 |
| VIT_07s0005g02570.t01 | Wine grape | nucleus | 37.08 | 37.15 |
| KRG96611 | Soybean | nucleus | 36.29 | 35.66 |
| KRH68345 | Soybean | endoplasmic reticulum, vacuole | 36.49 | 34.2 |
| GSMUA_Achr11P... | Banana | nucleus | 28.21 | 34.13 |
| KRH69145 | Soybean | nucleus | 31.95 | 33.47 |
| KRH33656 | Soybean | nucleus | 31.56 | 33.13 |
| Zm00001d039245_P001 | Maize | nucleus | 30.77 | 28.84 |
| Zm00001d011237_P001 | Maize | nucleus | 16.57 | 28.19 |
| Zm00001d020492_P001 | Maize | nucleus | 16.17 | 27.15 |
| Zm00001d020495_P001 | Maize | nucleus | 13.02 | 24.81 |
| Zm00001d008794_P001 | Maize | nucleus | 25.64 | 24.07 |
| Zm00001d053746_P001 | Maize | nucleus | 14.99 | 23.68 |
| Zm00001d045375_P001 | Maize | nucleus | 11.64 | 23.6 |
| Zm00001d009595_P001 | Maize | nucleus | 28.21 | 23.44 |
| Zm00001d046805_P001 | Maize | nucleus | 15.98 | 23.08 |
| Zm00001d039532_P001 | Maize | nucleus | 24.46 | 22.67 |
| Zm00001d015515_P001 | Maize | nucleus | 15.38 | 22.48 |
| Zm00001d039044_P001 | Maize | nucleus | 26.82 | 21.66 |
| Zm00001d005749_P001 | Maize | nucleus | 14.79 | 21.37 |
| Zm00001d036726_P001 | Maize | nucleus | 14.2 | 20.93 |
| Zm00001d018203_P001 | Maize | nucleus | 21.5 | 18.83 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A1D6FAT9 | ProteinID:AQK89164.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF29 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI0008441E41 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | EnsemblPlantsGene:Zm00001d008190 | EnsemblPlants:Zm00001d008190_P001 | EnsemblPlants:Zm00001d008190_T001 |
| SEG:seg | : | : | : | : | : |
Description
WRKY-transcription factor 18Probable WRKY transcription factor 47
Coordinates
chr8:-:774348..784221
Molecular Weight (calculated)
53197.1 Da
IEP (calculated)
9.178
GRAVY (calculated)
-0.281
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAAAAKNQK IEASSAVEAE LRRVVEDNRR LRGMMNELTR NYGAMYQQLL QVTQHHPHRQ HPVDLMINRS SLAHLQFMAL ISSLTKQIND TYVRVHHHQI
101: WMQTRLTTAA SYNDDTSAQQ LLRVEDEAAS DGAGEASPSL SNGGNHNDGG DGKQRRTSSN VTAPPARENG GGERAELPAH KTRVSVRARS EAPMVTNTNN
201: LIPFPCYVDL LKETFLIKNT ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA VACPVRKQVQ RCAEDKTILV TTYEGHHNHP LPPAAATMAS TTSAAATMLL
301: SGPATSRDGA AALLGHPAAL FQFHHSSSIP YASTMATLSA SAPFPTITLD LTQTPGGVVG SGGGLLLPHH GLGLHRPPSG IHPVAAPAMP LSPLATLLQQ
401: LPPTGSMSLA GLVARHEQQQ SVMETVTAAI AANPNFTTAL AAAISSVMAG AAHQAQPTPR AGNIGSAGEA NGSAGGAAAG PTAAGAYGAS GGSPRFATQS
501: ACTTSTT
101: WMQTRLTTAA SYNDDTSAQQ LLRVEDEAAS DGAGEASPSL SNGGNHNDGG DGKQRRTSSN VTAPPARENG GGERAELPAH KTRVSVRARS EAPMVTNTNN
201: LIPFPCYVDL LKETFLIKNT ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA VACPVRKQVQ RCAEDKTILV TTYEGHHNHP LPPAAATMAS TTSAAATMLL
301: SGPATSRDGA AALLGHPAAL FQFHHSSSIP YASTMATLSA SAPFPTITLD LTQTPGGVVG SGGGLLLPHH GLGLHRPPSG IHPVAAPAMP LSPLATLLQQ
401: LPPTGSMSLA GLVARHEQQQ SVMETVTAAI AANPNFTTAL AAAISSVMAG AAHQAQPTPR AGNIGSAGEA NGSAGGAAAG PTAAGAYGAS GGSPRFATQS
501: ACTTSTT
001: MVDDGLSVDM EEKRTKCENA QLREELKKAS EDNQRLKQML SQTTNNFNSL QMQLVAVMRQ QEDHHHLATT ENNDNVKNRH EVPEMVPRQF IDLGPHSDEV
101: SSEERTTVRS GSPPSLLEKS SSRQNGKRVL VREESPETES NGWRNPNKVP KHHASSSICG GNGSENASSK VIEQAAAEAT MRKARVSVRA RSEAPMLSDG
201: CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DRTILITTYE GNHNHPLPPA AMNMASTTTA AASMLLSGST MSNQDGLMNP TNLLARTILP
301: CSSSMATISA SAPFPTITLD LTESPNGNNP TNNPLMQFSQ RSGLVELNQS VLPHMMGQAL YYNQQSKFSG LHMPSQPLNA GESVSAATAA IASNPNFAAA
401: LAAAITSIIN GSNNQQNGNN NNSNVTTSNV DNRQ
101: SSEERTTVRS GSPPSLLEKS SSRQNGKRVL VREESPETES NGWRNPNKVP KHHASSSICG GNGSENASSK VIEQAAAEAT MRKARVSVRA RSEAPMLSDG
201: CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DRTILITTYE GNHNHPLPPA AMNMASTTTA AASMLLSGST MSNQDGLMNP TNLLARTILP
301: CSSSMATISA SAPFPTITLD LTESPNGNNP TNNPLMQFSQ RSGLVELNQS VLPHMMGQAL YYNQQSKFSG LHMPSQPLNA GESVSAATAA IASNPNFAAA
401: LAAAITSIIN GSNNQQNGNN NNSNVTTSNV DNRQ
Arabidopsis Description
WRKY42WRKY transcription factor 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEC3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.