Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15674 | Soybean | nucleus | 83.01 | 91.84 |
| KRH61669 | Soybean | nucleus | 41.03 | 58.18 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 33.97 | 55.21 |
| Bra019123.1-P | Field mustard | nucleus | 31.09 | 50.0 |
| PGSC0003DMT400019058 | Potato | nucleus | 39.42 | 47.13 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 47.12 | 46.37 |
| Solyc08g067360.2.1 | Tomato | nucleus | 38.14 | 46.12 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 27.56 | 45.26 |
| KRH23643 | Soybean | nucleus | 43.91 | 44.34 |
| Solyc08g067340.2.1 | Tomato | nucleus | 35.9 | 44.27 |
| KRH52329 | Soybean | nucleus | 43.59 | 44.01 |
| PGSC0003DMT400019061 | Potato | nucleus | 35.58 | 43.87 |
| CDX72327 | Canola | nucleus | 39.74 | 43.51 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 32.05 | 42.55 |
| KRH47344 | Soybean | nucleus | 42.31 | 42.44 |
| KRH44560 | Soybean | nucleus | 41.99 | 41.85 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 36.86 | 41.82 |
| GSMUA_Achr10P... | Banana | nucleus | 31.09 | 41.81 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 36.86 | 41.07 |
| CDX75196 | Canola | nucleus | 37.18 | 40.99 |
| KRH09652 | Soybean | nucleus | 43.27 | 40.91 |
| GSMUA_Achr11P... | Banana | nucleus | 32.05 | 40.82 |
| AT4G31800.1 | Thale cress | nucleus | 40.38 | 40.65 |
| AT2G25000.1 | Thale cress | nucleus | 35.26 | 40.59 |
| CDY39879 | Canola | nucleus | 39.42 | 40.07 |
| GSMUA_Achr10P... | Banana | nucleus | 36.86 | 39.93 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 22.12 | 39.66 |
| Bra010220.1-P | Field mustard | nucleus | 38.78 | 39.29 |
| CDX68787 | Canola | nucleus | 39.42 | 38.56 |
| Bra011299.1-P | Field mustard | nucleus | 39.1 | 38.49 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 26.6 | 37.22 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 33.33 | 35.99 |
| Bra023983.1-P | Field mustard | nucleus | 39.42 | 35.65 |
| CDY70096 | Canola | nucleus | 39.1 | 35.36 |
| Zm00001d053746_P001 | Maize | nucleus | 35.9 | 34.89 |
| Os02t0181300-01 | Rice | nucleus | 38.46 | 34.48 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 38.14 | 34.2 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 38.14 | 34.0 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 38.14 | 33.71 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 34.94 | 33.64 |
| Os09t0417600-02 | Rice | nucleus | 35.26 | 33.64 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 35.26 | 33.64 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 34.29 | 33.54 |
| Os06t0649000-01 | Rice | nucleus | 36.22 | 33.53 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 34.94 | 33.44 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 34.94 | 33.44 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 34.94 | 33.33 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 34.29 | 33.23 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 34.94 | 33.13 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 37.5 | 32.96 |
| Zm00001d015515_P001 | Maize | nucleus | 36.54 | 32.85 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 33.97 | 32.32 |
| EES04642 | Sorghum | nucleus | 37.18 | 31.87 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 29.49 | 31.83 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 27.56 | 31.73 |
| Zm00001d046805_P001 | Maize | nucleus | 35.58 | 31.62 |
| EER90124 | Sorghum | nucleus | 34.62 | 31.58 |
| KXG35639 | Sorghum | nucleus | 29.81 | 31.53 |
| KRH61668 | Soybean | nucleus | 23.72 | 31.49 |
| Zm00001d020492_P001 | Maize | nucleus | 30.45 | 31.46 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 33.65 | 31.34 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 33.01 | 31.12 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 33.01 | 31.12 |
| Zm00001d036726_P001 | Maize | nucleus | 34.29 | 31.1 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 26.92 | 31.0 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 32.69 | 30.82 |
| EER98905 | Sorghum | nucleus, plastid | 32.05 | 30.58 |
| EER88729 | Sorghum | nucleus | 33.97 | 30.46 |
| Zm00001d020495_P001 | Maize | nucleus | 25.96 | 30.45 |
| TraesCS7D01G497300.1 | Wheat | plastid | 36.22 | 30.38 |
| KRH54838 | Soybean | cytosol, nucleus | 22.76 | 30.21 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 33.33 | 29.89 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 31.09 | 29.39 |
| KRG89544 | Soybean | nucleus | 15.06 | 28.83 |
| KRH05362 | Soybean | nucleus | 25.64 | 28.78 |
| KRH15655 | Soybean | nucleus | 25.64 | 28.78 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 33.97 | 28.57 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 35.58 | 27.34 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 33.97 | 27.11 |
| Zm00001d005749_P001 | Maize | nucleus | 30.13 | 26.78 |
| Os09t0417800-01 | Rice | nucleus | 27.24 | 26.73 |
| KRH42243 | Soybean | nucleus | 11.86 | 20.44 |
| KRH38314 | Soybean | nucleus | 15.71 | 20.25 |
| KRH19450 | Soybean | nucleus | 24.04 | 19.58 |
| KRH02502 | Soybean | nucleus | 24.04 | 19.18 |
| KRH73787 | Soybean | nucleus | 24.04 | 17.86 |
| KRH36485 | Soybean | nucleus | 30.45 | 17.56 |
| KRH02033 | Soybean | nucleus | 27.24 | 17.38 |
| KRH69145 | Soybean | nucleus | 26.92 | 17.36 |
| KRH46231 | Soybean | nucleus | 26.92 | 17.28 |
| KRH51128 | Soybean | nucleus, plastid | 28.21 | 17.02 |
| KRH33656 | Soybean | nucleus | 26.28 | 16.98 |
| KRH11472 | Soybean | nucleus | 30.13 | 16.88 |
| KRG98705 | Soybean | nucleus | 25.32 | 16.53 |
| KRH68345 | Soybean | endoplasmic reticulum, vacuole | 27.56 | 15.9 |
| KRG96611 | Soybean | nucleus | 25.96 | 15.7 |
| KRG93506 | Soybean | nucleus | 23.72 | 15.1 |
| KRH33270 | Soybean | nucleus | 14.74 | 15.08 |
| KRH12664 | Soybean | nucleus | 21.79 | 15.08 |
| KRH37650 | Soybean | nucleus | 22.12 | 15.07 |
| KRH63398 | Soybean | nucleus | 24.68 | 14.5 |
| KRH22585 | Soybean | nucleus | 28.53 | 14.5 |
| KRH56160 | Soybean | nucleus | 28.85 | 14.33 |
| KRH25355 | Soybean | nucleus | 27.88 | 14.17 |
| KRH58361 | Soybean | nucleus | 21.47 | 13.81 |
| KRH56941 | Soybean | nucleus | 24.68 | 13.77 |
| KRH03442 | Soybean | nucleus | 26.28 | 13.67 |
| KRH40121 | Soybean | nucleus | 23.4 | 13.49 |
| KRH74791 | Soybean | nucleus | 21.79 | 13.36 |
| KRH01137 | Soybean | nucleus | 23.08 | 13.31 |
| KRH54509 | Soybean | nucleus | 25.32 | 12.85 |
| KRH69334 | Soybean | nucleus | 21.47 | 12.71 |
| KRG99150 | Soybean | nucleus | 21.47 | 12.67 |
Protein Annotations
| EntrezGene:100127380 | MapMan:15.5.22 | Gene3D:2.20.25.80 | EMBL:ACUP02010730 | EnsemblPlantsGene:GLYMA_17G222300 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:K7MNC2 | EnsemblPlants:KRH05350 | ProteinID:KRH05350 | ProteinID:KRH05350.1 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF39 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00023D56D3 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:37512607..37514905
Molecular Weight (calculated)
35020.3 Da
IEP (calculated)
8.146
GRAVY (calculated)
-0.553
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPTCGDTSL DLNVDPSTMH MDGALVEELR RLSCENKRLT HLCENYMALQ KQLSQLINTN FDQQLDYPIE SSRKRKAAES DQCCTNKFVG VSNNNAECSS
101: IITEDSFKKY KDFNSSPKVS KFLVKTEASN NSLYVMDGYQ WRKYGQKVTR DNPSPRAYFR CSFAPSCPVK KKSSQNKIKL SNFSNVSHHR MIIWVQRSLE
201: DPTILVTTYE GEHNHGHQRA EISLVSNQSE ALPPLKGSSP VSSPNTATIR SAVCPTVTLD LVKSGLVEFE SAQKSSIQQF LVQQMATSLT RDPNFTTELA
301: TAISGKILEA QW
101: IITEDSFKKY KDFNSSPKVS KFLVKTEASN NSLYVMDGYQ WRKYGQKVTR DNPSPRAYFR CSFAPSCPVK KKSSQNKIKL SNFSNVSHHR MIIWVQRSLE
201: DPTILVTTYE GEHNHGHQRA EISLVSNQSE ALPPLKGSSP VSSPNTATIR SAVCPTVTLD LVKSGLVEFE SAQKSSIQQF LVQQMATSLT RDPNFTTELA
301: TAISGKILEA QW
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.