Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 4
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr7P19340_001 | Banana | nucleus | 52.11 | 51.56 |
GSMUA_Achr11P... | Banana | nucleus | 59.47 | 46.12 |
Bra019123.1-P | Field mustard | nucleus | 44.74 | 43.81 |
GSMUA_Achr10P... | Banana | nucleus | 64.74 | 42.71 |
GSMUA_Achr10P... | Banana | nucleus | 50.53 | 41.38 |
GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 46.84 | 39.91 |
GSMUA_Achr1P10080_001 | Banana | nucleus | 68.95 | 39.1 |
GSMUA_Achr3P13440_001 | Banana | nucleus | 54.21 | 37.45 |
GSMUA_Achr5P16460_001 | Banana | nucleus | 46.32 | 37.45 |
GSMUA_Achr7P05200_001 | Banana | nucleus | 53.68 | 36.43 |
Solyc12g042590.1.1 | Tomato | nucleus | 40.0 | 35.19 |
PGSC0003DMT400019061 | Potato | nucleus | 45.79 | 34.39 |
PGSC0003DMT400073710 | Potato | nucleus | 38.95 | 34.1 |
PGSC0003DMT400019058 | Potato | nucleus | 46.84 | 34.1 |
GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 17.37 | 34.02 |
Solyc08g067340.2.1 | Tomato | nucleus | 44.74 | 33.6 |
Solyc08g067360.2.1 | Tomato | nucleus | 45.26 | 33.33 |
CDX72327 | Canola | nucleus | 48.95 | 32.63 |
VIT_09s0018g00240.t01 | Wine grape | nucleus | 52.63 | 32.15 |
CDY67287 | Canola | nucleus | 48.95 | 32.07 |
KRH61669 | Soybean | nucleus | 36.84 | 31.82 |
AT2G25000.1 | Thale cress | nucleus | 45.26 | 31.73 |
CDY22299 | Canola | nucleus | 48.42 | 31.72 |
Bra008435.1-P | Field mustard | nucleus | 48.42 | 31.72 |
CDX75196 | Canola | nucleus | 46.32 | 31.1 |
CDY39879 | Canola | nucleus | 50.0 | 30.94 |
Bra010220.1-P | Field mustard | nucleus | 49.47 | 30.52 |
KRH15674 | Soybean | nucleus | 45.26 | 30.5 |
CDX67971 | Canola | nucleus | 46.84 | 29.97 |
Bra003588.1-P | Field mustard | nucleus | 46.84 | 29.97 |
KRH47344 | Soybean | nucleus | 48.95 | 29.9 |
CDX88573 | Canola | nucleus | 47.37 | 29.9 |
Bra035148.1-P | Field mustard | nucleus | 46.84 | 29.67 |
CDX87347 | Canola | nucleus | 46.84 | 29.67 |
VIT_04s0008g05760.t01 | Wine grape | nucleus | 49.47 | 29.65 |
AT1G80840.1 | Thale cress | nucleus | 46.84 | 29.47 |
KRH23643 | Soybean | nucleus | 47.89 | 29.45 |
KRH44560 | Soybean | nucleus | 48.42 | 29.39 |
CDX79347 | Canola | nucleus | 45.26 | 28.86 |
GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 43.68 | 28.72 |
AT4G31800.1 | Thale cress | nucleus | 46.84 | 28.71 |
Bra011299.1-P | Field mustard | nucleus | 46.32 | 27.76 |
CDX68787 | Canola | nucleus | 46.32 | 27.59 |
KRH09652 | Soybean | nucleus | 47.89 | 27.58 |
KRH05350 | Soybean | nucleus | 45.26 | 27.56 |
Solyc03g116890.2.1 | Tomato | nucleus | 49.47 | 26.86 |
PGSC0003DMT400073396 | Potato | nucleus | 50.53 | 26.67 |
Solyc06g068460.2.1 | Tomato | nucleus | 50.53 | 26.67 |
Bra023983.1-P | Field mustard | nucleus | 47.89 | 26.38 |
CDY70096 | Canola | nucleus | 47.89 | 26.38 |
PGSC0003DMT400051047 | Potato | nucleus | 48.95 | 26.2 |
KRH52329 | Soybean | nucleus | 41.05 | 25.24 |
GSMUA_Achr3P31130_001 | Banana | mitochondrion, nucleus | 31.58 | 17.14 |
GSMUA_Achr7P08850_001 | Banana | nucleus | 34.21 | 16.75 |
GSMUA_Achr2P18390_001 | Banana | nucleus | 31.58 | 16.35 |
GSMUA_Achr1P05240_001 | Banana | nucleus | 27.89 | 16.26 |
GSMUA_Achr10P... | Banana | nucleus | 32.11 | 16.18 |
GSMUA_Achr3P03090_001 | Banana | nucleus | 31.58 | 15.71 |
GSMUA_Achr7P13400_001 | Banana | nucleus | 30.53 | 14.46 |
GSMUA_Achr11P... | Banana | nucleus | 31.05 | 14.08 |
GSMUA_Achr7P18820_001 | Banana | nucleus | 31.58 | 13.36 |
GSMUA_Achr3P20290_001 | Banana | nucleus | 26.84 | 13.32 |
GSMUA_Achr6P05880_001 | Banana | nucleus | 32.11 | 12.82 |
GSMUA_Achr6P02330_001 | Banana | nucleus | 24.74 | 12.74 |
GSMUA_Achr6P07620_001 | Banana | nucleus, plastid | 32.63 | 12.7 |
GSMUA_Achr5P16750_001 | Banana | nucleus | 32.11 | 12.55 |
GSMUA_Achr10P... | Banana | nucleus | 30.53 | 12.11 |
GSMUA_Achr10P... | Banana | nucleus | 31.05 | 11.9 |
GSMUA_Achr10P... | Banana | nucleus | 31.58 | 11.76 |
GSMUA_Achr6P13630_001 | Banana | nucleus | 31.58 | 11.45 |
GSMUA_Achr2P15200_001 | Banana | nucleus | 31.58 | 11.28 |
GSMUA_Achr5P09730_001 | Banana | nucleus | 27.89 | 7.44 |
Protein Annotations
MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr2G05100_001 | EnsemblPlants:GSMUA_Achr2P05100_001 | EnsemblPlants:GSMUA_Achr2T05100_001 | InterPro:IPR003657 | InterPro:IPR036576 |
UniProt:M0S5A1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF3 | SMART:SM00774 |
SUPFAM:SSF118290 | UniParc:UPI00029666A1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G05100_001]
Coordinates
chr2:+:10330792..10331526
Molecular Weight (calculated)
21027.8 Da
IEP (calculated)
9.998
GRAVY (calculated)
-0.792
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAKYGALRR QMTDLLPKHT SSEGGCVSSG TKDAADTGMR VREGEHNPKV SKLYVRTDPS DSSLVVKDGH HWRKYGQKVT RDNPCPRAYY RCSFAPSCPV
101: KKKVQRSAED TSMLVATYEG EHNHGQPSHP GSVHAPRHCS LASDRSHASK KHKQDYLVEQ MAVSLTNDIA FKTALAAAIS GRLYRSYSPK
101: KKKVQRSAED TSMLVATYEG EHNHGQPSHP GSVHAPRHCS LASDRSHASK KHKQDYLVEQ MAVSLTNDIA FKTALAAAIS GRLYRSYSPK
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.