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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P10080_001
GSMUA_Achr2P05100_001
GSMUA_Achr3P13440_001
GSMUA_Achr4P01930_001
GSMUA_Achr5P12200_001
GSMUA_Achr5P12210_001
GSMUA_Achr5P16460_001
GSMUA_Achr7P05200_001
GSMUA_Achr7P16090_001
GSMUA_Achr7P19340_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G25740.1 GSMUA_Achr10P... AT1G22920.1 21798944
AT4G25740.1 GSMUA_Achr11P... AT3G48150.1 21798944
AT5G41520.1 GSMUA_Achr10P... AT2G25000.1 21798944
AT5G41520.1 GSMUA_Achr10P... AT2G25000.1 21798944
AT5G41520.1 GSMUA_Achr11P... AT2G25000.1 21798944
AT5G41520.1 GSMUA_Achr1P10080_001 AT2G25000.1 21798944
AT5G41520.1 GSMUA_Achr2P05100_001 AT2G25000.1 21798944
AT5G41520.1 GSMUA_Achr3P13440_001 AT2G25000.1 21798944
AT5G41520.1 GSMUA_Achr4P01930_001 AT2G25000.1 21798944
AT5G41520.1 GSMUA_Achr5P16460_001 AT2G25000.1 21798944
AT5G41520.1 GSMUA_Achr7P05200_001 AT2G25000.1 21798944
AT5G41520.1 GSMUA_Achr7P16090_001 AT2G25000.1 21798944
AT5G41520.1 GSMUA_Achr7P19340_001 AT2G25000.1 21798944
AT5G52650.1 GSMUA_Achr5P12200_001 AT1G01800.1 21798944
AT5G52650.1 GSMUA_Achr5P12210_001 AT1G01800.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana cytosol 94.89 94.89
Os01t0962600-01 Rice plastid 83.21 63.69
Os02t0549600-01 Rice cytosol 84.67 63.39
Os04t0430100-01 Rice nucleus 84.67 63.39
Zm00001d011816_P001 Maize plastid 82.48 63.13
EES10818 Sorghum cytosol 83.94 62.5
VIT_16s0050g01160.t01 Wine grape cytosol 81.75 62.22
EES04270 Sorghum cytosol 81.02 62.01
Zm00001d025413_P001 Maize extracellular, mitochondrion 80.29 61.45
Zm00001d003672_P001 Maize plastid 81.02 61.33
KRH41234 Soybean nucleus 80.29 60.77
KRH59964 Soybean nucleus 80.29 60.11
Solyc01g099670.2.1 Tomato nucleus 79.56 59.89
Zm00001d042023_P001 Maize plastid 78.1 59.78
KRH27894 Soybean cytosol 78.1 59.44
PGSC0003DMT400075267 Potato cytosol 78.1 59.44
Solyc12g096540.1.1 Tomato nucleus 78.1 59.44
PGSC0003DMT400063697 Potato cytosol 78.83 59.34
KRH77585 Soybean nucleus 78.1 59.12
TraesCS2A01G302600.1 Wheat cytosol 78.1 56.91
TraesCS2B01G318500.1 Wheat cytosol, golgi, unclear 78.1 56.91
TraesCS2D01G301300.1 Wheat cytosol 77.37 56.38
AT4G25740.1 Thale cress cytosol 72.26 55.93
AT5G52650.1 Thale cress cytosol 72.26 55.31
Bra019143.1-P Field mustard cytosol 72.26 54.7
Bra010448.1-P Field mustard cytosol 72.26 54.7
Bra013915.1-P Field mustard cytosol 71.53 54.44
Bra029112.1-P Field mustard cytosol 68.61 53.11
Bra025492.1-P Field mustard cytosol 68.61 52.51
Bra003118.1-P Field mustard cytosol 67.88 51.96
GSMUA_AchrUn_... Banana extracellular 88.32 51.93
HORVU3Hr1G111760.2 Barley mitochondrion 78.83 51.92
AT5G41520.1 Thale cress cytosol 67.15 51.11
VIT_02s0025g00310.t01 Wine grape cytosol 70.8 51.05
GSMUA_Achr3P22420_001 Banana endoplasmic reticulum, golgi, plasma membrane 90.51 50.61
CDY27840 Canola cytosol 71.53 49.75
GSMUA_Achr8P08040_001 Banana unclear 86.86 49.38
HORVU0Hr1G004700.1 Barley mitochondrion 76.64 48.39
CDY39734 Canola cytosol 68.61 48.21
CDY49476 Canola cytosol 72.26 47.83
CDX89397 Canola extracellular 72.26 46.48
CDY35037 Canola cytosol 67.88 45.59
GSMUA_Achr1P16990_001 Banana cytosol, endoplasmic reticulum, nucleus 91.24 45.29
CDY44470 Canola cytosol 68.61 44.76
CDY56154 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 69.34 43.58
CDX92731 Canola cytosol 72.26 43.42
Zm00001d048305_P001 Maize cytosol 44.53 41.5
CDX94419 Canola mitochondrion 72.26 41.25
CDY51832 Canola plastid 69.34 40.25
CDY50187 Canola endoplasmic reticulum, golgi 71.53 39.2
CDY66010 Canola cytosol 72.26 38.52
CDX67498 Canola extracellular 67.15 19.7
GSMUA_Achr8P32790_001 Banana mitochondrion 26.28 17.06
Protein Annotations
EnsemblPlants:GSMUA_Achr2P08200_001EnsemblPlants:GSMUA_Achr2T08200_001EnsemblPlantsGene:GSMUA_Achr2G08200_001Gene3D:1.10.10.10InterPro:IPR036388InterPro:Rps10
InterPro:S10_plectin_NInterPro:WH-like_DNA-bd_sfPANTHER:PTHR12146PANTHER:PTHR12146:SF7PFAM:PF03501SEG:seg
UniParc:UPI00029549ECUniProt:M0S661MapMan:17.1.3.1.11:::
Description
40S ribosomal protein S10 [Source:GMGC_GENE;Acc:GSMUA_Achr2G08200_001]
Coordinates
chr2:-:12282610..12285496
Molecular Weight (calculated)
15078.5 Da
IEP (calculated)
10.148
GRAVY (calculated)
-1.109
Length
137 amino acids
Sequence
(BLAST)
001: MQSFKSREYV RETFAWQHYY WYLTNDGIEY LRTYLNLPSE IVPATLKKSS RPPPRPFGSG PPGDRPRGPP RFEGDRPRFG DRDGYRGGPR GGPPGDFGGD
101: KGGAPPEFQP SFRGTEGRAG FGRGRGGYGA GATSSME
Best Arabidopsis Sequence Match ( AT4G25740.1 )
(BLAST)
001: MIISENNRRE ICKYLFKEGV CFAKKDFNLP KHPLIDVPNL QVIKLMQSFK SKEYVRETFA WMHYYWFLTN EGIEFLRTYL NLPSDVVPAT LKKSAKPGGR
101: PFGGPPGDRQ RGPPRSDGDR PRFGDRDGYR GGPRGGDEKG GAPADFQPSF QGGGGRPGFG RGAGGYSAAA PSGSGFP
Arabidopsis Description
RPS10A40S ribosomal protein S10-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW09]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.