Factsheet for GSMUA_Achr5P12200_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002845_P001	Maize	cytosol	9.52	51.72
KRH40499	Soybean	cytosol	17.78	50.91
Bra032567.1-P	Field mustard	cytosol	18.73	50.43
KRH48202	Soybean	cytosol	46.98	49.5
KRH48194	Soybean	cytosol	46.67	49.33
PGSC0003DMT400000067	Potato	golgi, peroxisome	45.08	48.8
KRH65113	Soybean	cytosol	46.03	48.49
KRH48206	Soybean	cytosol	46.67	48.2
KRH00691	Soybean	cytosol	38.41	47.45
KRH48196	Soybean	cytosol	44.44	47.3
Bra032573.1-P	Field mustard	cytosol	20.0	47.01
KRH17659	Soybean	cytosol	14.6	46.94
Solyc01g099560.2.1	Tomato	cytosol	26.03	46.33
CDX71758	Canola	cytosol	43.17	45.95
KRH00696	Soybean	mitochondrion	42.86	45.92
Solyc01g094210.2.1	Tomato	cytosol	43.17	45.79
KRH40500	Soybean	cytosol, nucleus	42.22	45.24
Bra007585.1-P	Field mustard	cytosol	42.22	44.93
CDY48937	Canola	cytosol	42.22	44.93
VIT_02s0025g04510.t01	Wine grape	cytosol	27.94	44.22
KRH48198	Soybean	cytosol	40.0	43.6
AT2G24190.2	Thale cress	cytosol	41.59	43.52
Bra014448.1-P	Field mustard	cytosol	40.95	43.43
PGSC0003DMT400000078	Potato	cytosol	40.95	43.0
AT1G01800.1	Thale cress	cytosol	40.0	42.71
Bra033230.1-P	Field mustard	cytosol	40.0	42.71
Solyc01g094220.2.1	Tomato	cytosol	40.63	42.67
CDY15148	Canola	cytosol	39.68	42.37
CDX90062	Canola	cytosol	39.68	42.37
CDX89104	Canola	cytosol	36.83	42.03
KRH65114	Soybean	cytosol	39.05	41.84
CDY56927	Canola	endoplasmic reticulum, golgi	40.63	41.83
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	42.22	40.67
PGSC0003DMT400000080	Potato	cytosol, mitochondrion, plastid	39.05	40.2
Solyc01g094270.2.1	Tomato	cytosol, plastid	40.0	40.0
KRH65115	Soybean	cytosol	40.63	39.38
GSMUA_Achr10P...	Banana	plastid	43.49	39.26
PGSC0003DMT400026580	Potato	cytosol	38.41	39.03
Solyc10g017570.2.1	Tomato	cytosol	37.78	38.39
GSMUA_Achr5P12210_001	Banana	mitochondrion	74.6	38.27
Solyc01g094250.2.1	Tomato	cytosol	38.73	38.24
PGSC0003DMT400088659	Potato	cytosol	14.29	38.14
Solyc01g094260.2.1	Tomato	cytosol	38.41	37.93
Solyc01g094240.2.1	Tomato	cytosol	37.78	37.42
KRH40504	Soybean	endoplasmic reticulum	43.17	34.87
GSMUA_Achr4P15900_001	Banana	cytosol	33.02	32.91
GSMUA_Achr8P28970_001	Banana	peroxisome	27.62	29.49

Protein Annotations

EnsemblPlants:GSMUA_Achr5P12200_001	EnsemblPlants:GSMUA_Achr5T12200_001	EnsemblPlantsGene:GSMUA_Achr5G12200_001	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43490	PANTHER:PTHR43490:SF43	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002967A30	UniProt:M0SXU9	MapMan:50.1.1	:	:

Description

(+)-neomenthol dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr5G12200_001]

Coordinates

chr5:+:8795274..8798223

Molecular Weight (calculated)

34954.9 Da

IEP (calculated)

4.950

GRAVY (calculated)

-0.035

Length

315 amino acids

Sequence
(BLAST)

001: MEGAIHTTTS KMIALVTGAN KGIGLEICRQ LLSKGSMVIL TARDEQRGHA AIANLQASGA SDSDVLFHQL DVADSASVAS LADFVRDQFG KLDVLVNNAA
101: VSGLALSPEI LSSFEQVRDR LTDYANSITE TYDMVEECLY INYYGTKAVT EALIPLLQSS QSPRIVNLSS FYGRLRYIPG DRIKEEMRNV DVLSEDRLNE
201: LLQSFLNDFK ERKLEENGWP TRICAYKVSK VAVSAYTRIL AKKYPNICIN CVHPGVVKTD INWNTGELPV EEGAQGPVFV ALLPDGSPSG QFYDMKEVSS
301: FERIMFFFVI QKIFI

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.