Factsheet for PGSC0003DMT400000080

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g094270.2.1	Tomato	cytosol, plastid	94.44	91.75
PGSC0003DMT400088659	Potato	cytosol	30.07	77.97
KRH40500	Soybean	cytosol, nucleus	53.27	55.44
PGSC0003DMT400000078	Potato	cytosol	54.25	55.33
PGSC0003DMT400000067	Potato	golgi, peroxisome	52.61	55.33
KRH65114	Soybean	cytosol	52.61	54.76
PGSC0003DMT400026580	Potato	cytosol	54.58	53.87
AT2G24190.2	Thale cress	cytosol	52.94	53.82
CDY48937	Canola	cytosol	51.96	53.72
CDX71758	Canola	cytosol	51.96	53.72
Bra007585.1-P	Field mustard	cytosol	51.96	53.72
AT1G01800.1	Thale cress	cytosol	50.65	52.54
Bra032567.1-P	Field mustard	cytosol	19.93	52.14
CDY15148	Canola	cytosol	49.67	51.53
Bra033230.1-P	Field mustard	cytosol	49.67	51.53
CDX89104	Canola	cytosol	46.41	51.45
Bra014448.1-P	Field mustard	cytosol	49.67	51.18
OQU82017	Sorghum	extracellular	27.45	50.91
CDX90062	Canola	cytosol	49.02	50.85
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	53.27	49.85
CDY56927	Canola	endoplasmic reticulum, golgi	49.02	49.02
PGSC0003DMT400048179	Potato	cytosol	47.39	48.49
PGSC0003DMT400048181	Potato	cytosol	46.73	47.83
Bra032573.1-P	Field mustard	cytosol	20.91	47.76
PGSC0003DMT400048175	Potato	cytosol, peroxisome, plastid	19.28	46.46
TraesCS7A01G114100.1	Wheat	cytosol	46.41	46.25
PGSC0003DMT400047834	Potato	cytosol	45.1	46.15
EES11171	Sorghum	cytosol	46.73	45.98
TraesCS2B01G388700.1	Wheat	cytosol, plastid	45.75	45.75
TraesCS2D01G367800.1	Wheat	cytosol, plastid	45.42	45.42
TraesCS2A01G370900.1	Wheat	cytosol	45.75	45.31
TraesCS2D01G367200.1	Wheat	cytosol	45.75	45.31
Os04t0532400-01	Rice	cytosol	45.1	44.95
Os04t0531900-01	Rice	cytosol, plastid	45.1	44.95
HORVU7Hr1G024270.5	Barley	cytosol	45.1	44.95
TraesCS2B01G388300.1	Wheat	cytosol	45.42	44.55
EES11175	Sorghum	cytosol, plastid	43.46	44.48
Os04t0532100-01	Rice	cytosol	44.77	44.34
TraesCS2A01G371300.1	Wheat	cytosol	43.46	44.33
TraesCS2A01G371100.1	Wheat	cytosol	44.12	44.26
TraesCS2A01G371000.1	Wheat	cytosol	44.44	44.16
Os04t0531700-01	Rice	mitochondrion	15.69	44.04
EES11167	Sorghum	cytosol	44.44	43.87
TraesCS2B01G388600.1	Wheat	cytosol, plastid	43.79	43.79
EES11173	Sorghum	cytosol	44.44	43.73
HORVU2Hr1G091460.1	Barley	cytosol, mitochondrion, plastid	44.77	43.63
HORVU1Hr1G064390.1	Barley	cytosol	44.12	43.55
EES11174	Sorghum	cytosol	44.12	43.55
TraesCS2B01G388100.1	Wheat	cytosol	44.77	43.49
KXG26779	Sorghum	cytosol	44.12	43.41
TraesCS2D01G367700.1	Wheat	mitochondrion	43.79	43.37
TraesCS2B01G388200.2	Wheat	cytosol	38.24	43.33
TraesCS2A01G371400.1	Wheat	cytosol, plastid	43.14	43.14
TraesCS2A01G099800.1	Wheat	cytosol	44.12	42.99
EER93229	Sorghum	cytosol	43.79	42.68
TraesCS2D01G099300.1	Wheat	cytosol	43.46	42.36
TraesCS2A01G371200.1	Wheat	cytosol	42.16	42.3
TraesCS2D01G517700.1	Wheat	cytosol	42.48	42.21
EES07552	Sorghum	cytosol	42.48	42.21
HORVU2Hr1G091430.7	Barley	cytosol	42.81	41.85
TraesCS2A01G516200.2	Wheat	mitochondrion	41.5	41.78
KXG31187	Sorghum	mitochondrion	40.52	41.75
HORVU5Hr1G031560.1	Barley	cytosol	17.32	41.73
TraesCS2B01G116700.1	Wheat	mitochondrion	42.81	41.72
EES07551	Sorghum	cytosol	41.18	41.58
TraesCS2B01G544800.1	Wheat	cytosol	41.83	41.56
TraesCS7A01G111500.1	Wheat	cytosol	30.07	41.44
TraesCS2D01G367600.2	Wheat	plastid	42.48	41.4
PGSC0003DMT400065718	Potato	cytosol, mitochondrion	37.25	41.3
EES07554	Sorghum	cytosol	41.5	41.23
TraesCS2A01G371500.1	Wheat	plastid	45.1	41.19
EES07553	Sorghum	cytosol	41.5	41.1
KXG31133	Sorghum	cytosol	38.89	41.03
EES09734	Sorghum	cytosol	41.5	40.84
EES17690	Sorghum	cytosol	22.22	40.72
TraesCS2D01G367400.1	Wheat	plastid	45.42	39.94
HORVU2Hr1G091440.3	Barley	mitochondrion	46.41	39.89
TraesCS1D01G415900.1	Wheat	cytosol	40.52	39.74
EER97757	Sorghum	cytosol	42.48	39.27
GSMUA_Achr5P12200_001	Banana	cytosol	40.2	39.05
HORVU1Hr1G089830.1	Barley	cytosol	39.54	38.78
TraesCS1B01G437500.1	Wheat	cytosol	39.22	38.46
TraesCS2B01G388500.1	Wheat	cytosol, mitochondrion, nucleus	19.61	37.74
PGSC0003DMT400036929	Potato	cytoskeleton, cytosol, nucleus	38.24	37.38
PGSC0003DMT400037433	Potato	cytosol	37.91	36.83
PGSC0003DMT400022011	Potato	cytosol, peroxisome, plastid	14.71	36.59
TraesCS1A01G408800.1	Wheat	cytosol	39.54	35.69
Os07t0685800-01	Rice	plastid	43.46	35.66
HORVU2Hr1G114340.4	Barley	endoplasmic reticulum, golgi	41.83	35.07
OQU85768	Sorghum	cytosol	40.85	34.82
HORVU2Hr1G017120.1	Barley	plastid	41.5	34.6
KXG36979	Sorghum	plastid	42.16	34.49
TraesCS2D01G099500.1	Wheat	plastid	41.83	34.04
TraesCS2A01G100000.2	Wheat	plastid	41.18	33.51
TraesCS2B01G117000.1	Wheat	plastid	41.18	33.42
HORVU5Hr1G031520.2	Barley	cytosol	28.1	30.71
Os02t0640600-00	Rice	mitochondrion	33.99	27.96
GSMUA_Achr5P12210_001	Banana	mitochondrion	40.2	20.03
Os04t0531750-00	Rice	mitochondrion	2.94	2.72

Protein Annotations

EnsemblPlants:PGSC0003DMT400000080	EnsemblPlantsGene:PGSC0003DMG400000022	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	ncoils:Coil
PANTHER:PTHR43490	PANTHER:PTHR43490:SF58	PFAM:PF00106	PFAM:PF13561	PGSC:PGSC0003DMG400000022	PRINTS:PR00080
PRINTS:PR00081	SUPFAM:SSF51735	UniParc:UPI00029621BA	UniProt:M0ZG29	MapMan:50.1.1	:

Description

(+)-neomenthol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400000022]

Coordinates

chr1:+:71848964..71851318

Molecular Weight (calculated)

34053.9 Da

IEP (calculated)

7.137

GRAVY (calculated)

-0.174

Length

306 amino acids

Sequence
(BLAST)

001: MVRYAVVSGG NKGLGYETCK QLASKGVIVV LTSRDEKRGI EAIERLKKES NFTNDQVLFH QLDIMDPTSI SSLVDFINTK FGRLDILINN AGVGGLMVEG
101: DVLVLKEIIE GDFLTISTEN GKDGGTMKSY PEIVTNYELT KQCVETNYYG AKRMIEAFAP LLQLSNSPRI VNVASFLGKL KLLRNEWAKK VLSDEKSLTE
201: EKVEQVLNEF LKDFTENSIE SKGWPTNFTA YRVSKAALVA YTRILATKYP NFRVNSVCPG YCKTDVNANT GNLTAEKGAE SFVKLALLPN DGPSGLFFYR
301: QEVTFF

Best Arabidopsis Sequence Match ( AT3G61220.1 )
(BLAST)

001: MAEETPRYAV VTGANRGIGF EICRQLASEG IRVVLTSRDE NRGLEAVETL KKELEISDQS LLFHQLDVAD PASITSLAEF VKTQFGKLDI LVNNAGIGGI
101: ITDAEALRAG AGKEGFKWDE IITETYELTE ECIKINYYGP KRMCEAFIPL LKLSDSPRIV NVSSSMGQLK NVLNEWAKGI LSDAENLTEE RIDQVINQLL
201: NDFKEGTVKE KNWAKFMSAY VVSKASLNGY TRVLAKKHPE FRVNAVCPGF VKTDMNFKTG VLSVEEGASS PVRLALLPHQ ETPSGCFFSR KQVSEF

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.