Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90062 Canola cytosol 97.29 97.29
Bra032567.1-P Field mustard cytosol 37.63 94.87
AT1G01800.1 Thale cress cytosol 87.12 87.12
Bra032573.1-P Field mustard cytosol 38.64 85.07
Solyc01g094220.2.1 Tomato cytosol 58.31 57.33
PGSC0003DMT400000078 Potato cytosol 58.31 57.33
CDX71758 Canola cytosol 55.25 55.07
CDY48937 Canola cytosol 54.58 54.39
Solyc01g099560.2.1 Tomato cytosol 32.54 54.24
Solyc01g094210.2.1 Tomato cytosol 53.56 53.2
KRH40500 Soybean cytosol, nucleus 52.88 53.06
PGSC0003DMT400000067 Potato golgi, peroxisome 52.2 52.92
KRH65114 Soybean cytosol 52.2 52.38
CDX89104 Canola cytosol 48.81 52.17
CDY56927 Canola endoplasmic reticulum, golgi 52.88 50.98
Solyc01g094240.2.1 Tomato cytosol 53.56 49.69
PGSC0003DMT400000080 Potato cytosol, mitochondrion, plastid 51.53 49.67
PGSC0003DMT400088659 Potato cytosol 19.66 49.15
Solyc01g094260.2.1 Tomato cytosol 52.54 48.59
Solyc01g094270.2.1 Tomato cytosol, plastid 51.86 48.57
Solyc01g094250.2.1 Tomato cytosol 51.86 47.96
PGSC0003DMT400026580 Potato cytosol 48.81 46.45
EES11175 Sorghum cytosol, plastid 46.1 45.48
TraesCS2D01G517700.1 Wheat cytosol 47.12 45.13
KXG31187 Sorghum mitochondrion 45.42 45.12
Solyc10g017570.2.1 Tomato cytosol 47.12 44.84
TraesCS2B01G544800.1 Wheat cytosol 46.78 44.81
TraesCS2A01G516200.2 Wheat mitochondrion 46.1 44.74
EES07552 Sorghum cytosol 46.44 44.48
HORVU5Hr1G031560.1 Barley cytosol 18.98 44.09
TraesCS2D01G367200.1 Wheat cytosol 46.1 44.01
TraesCS2A01G370900.1 Wheat cytosol 46.1 44.01
Os04t0531700-01 Rice mitochondrion 15.93 43.12
KXG26779 Sorghum cytosol 45.42 43.09
TraesCS1D01G415900.1 Wheat cytosol 45.42 42.95
Os04t0532100-01 Rice cytosol 44.75 42.72
EES07553 Sorghum cytosol 44.75 42.72
OQU82017 Sorghum extracellular 23.73 42.42
EES07551 Sorghum cytosol 43.39 42.24
TraesCS2B01G388100.1 Wheat cytosol 45.08 42.22
EES07554 Sorghum cytosol 44.07 42.21
Os04t0531900-01 Rice cytosol, plastid 43.73 42.02
TraesCS1B01G437500.1 Wheat cytosol 44.41 41.99
TraesCS2A01G371100.1 Wheat cytosol 43.39 41.97
HORVU1Hr1G089830.1 Barley cytosol 44.07 41.67
EES11174 Sorghum cytosol 43.73 41.61
EES11173 Sorghum cytosol 43.73 41.48
HORVU2Hr1G091460.1 Barley cytosol, mitochondrion, plastid 44.07 41.4
TraesCS2B01G388300.1 Wheat cytosol 43.73 41.35
TraesCS2B01G388700.1 Wheat cytosol, plastid 42.71 41.18
TraesCS2B01G388600.1 Wheat cytosol, plastid 42.71 41.18
EES11171 Sorghum cytosol 43.39 41.16
TraesCS7A01G114100.1 Wheat cytosol 42.37 40.72
Os04t0532400-01 Rice cytosol 42.37 40.72
KXG31133 Sorghum cytosol 40.0 40.69
TraesCS2A01G371000.1 Wheat cytosol 42.37 40.58
TraesCS7A01G111500.1 Wheat cytosol 30.51 40.54
TraesCS2D01G367800.1 Wheat cytosol, plastid 42.03 40.52
HORVU7Hr1G024270.5 Barley cytosol 42.03 40.39
EES11167 Sorghum cytosol 42.37 40.32
TraesCS2A01G371400.1 Wheat cytosol, plastid 41.69 40.2
TraesCS2D01G367700.1 Wheat mitochondrion 42.03 40.13
TraesCS2A01G099800.1 Wheat cytosol 42.71 40.13
TraesCS2A01G371300.1 Wheat cytosol 40.68 40.0
TraesCS2A01G371200.1 Wheat cytosol 41.36 40.0
HORVU2Hr1G091430.7 Barley cytosol 42.37 39.94
EES09734 Sorghum cytosol 42.03 39.87
TraesCS2B01G116700.1 Wheat mitochondrion 42.37 39.81
GSMUA_Achr5P12200_001 Banana cytosol 42.37 39.68
TraesCS2D01G099300.1 Wheat cytosol 42.03 39.49
TraesCS2D01G367600.2 Wheat plastid 42.03 39.49
TraesCS2B01G388200.2 Wheat cytosol 35.93 39.26
HORVU1Hr1G064390.1 Barley cytosol 41.02 39.03
TraesCS1A01G408800.1 Wheat cytosol 44.75 38.94
EER93229 Sorghum cytosol 41.36 38.85
EER97757 Sorghum cytosol 42.71 38.07
CDY45793 Canola cytosol 39.66 37.74
CDY05983 Canola cytosol, peroxisome, plastid 37.29 37.67
CDX71880 Canola peroxisome 37.29 37.67
CDX67809 Canola peroxisome 37.63 37.63
HORVU2Hr1G114340.4 Barley endoplasmic reticulum, golgi 46.44 37.53
CDX84895 Canola cytosol 39.32 37.42
HORVU2Hr1G091440.3 Barley mitochondrion 44.41 36.8
Os07t0685800-01 Rice plastid 46.44 36.73
TraesCS2D01G367400.1 Wheat plastid 43.05 36.49
TraesCS2A01G371500.1 Wheat plastid 41.36 36.42
OQU85768 Sorghum cytosol 43.73 35.93
CDY53157 Canola cytosol 38.31 35.76
HORVU2Hr1G017120.1 Barley plastid 44.41 35.69
CDY00233 Canola cytosol 37.97 35.44
TraesCS2B01G117000.1 Wheat plastid 45.08 35.28
TraesCS2D01G099500.1 Wheat plastid 44.75 35.11
TraesCS2A01G100000.2 Wheat plastid 44.75 35.11
KXG36979 Sorghum plastid 44.41 35.03
EES17690 Sorghum cytosol 17.97 31.74
TraesCS2B01G388500.1 Wheat cytosol, mitochondrion, nucleus 16.95 31.45
HORVU5Hr1G031520.2 Barley cytosol 28.47 30.0
Os02t0640600-00 Rice mitochondrion 35.93 28.49
GSMUA_Achr5P12210_001 Banana mitochondrion 43.39 20.85
Os04t0531750-00 Rice mitochondrion 2.37 2.11
Protein Annotations
EnsemblPlants:CDY15148EnsemblPlantsGene:GSBRNA2T00085319001Gene3D:3.40.50.720GO:A0A078FS95InterPro:NAD(P)-bd_dom_sfInterPro:SDR_fam
PANTHER:PTHR43490PANTHER:PTHR43490:SF43PFAM:PF00106PRINTS:PR00080PRINTS:PR00081ProteinID:CDY15148
ProteinID:CDY15148.1SEG:segSUPFAM:SSF51735UniParc:UPI0004EF1CB4UniProt:A0A078FS95MapMan:50.1.1
Description
BnaC05g00270DBnaC05g00270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FS95]
Coordinates
chrLK032052:-:134850..136423
Molecular Weight (calculated)
31865.4 Da
IEP (calculated)
5.041
GRAVY (calculated)
0.013
Length
295 amino acids
Sequence
(BLAST)
001: MADSRVAVVS GSNKGIGFEI CRQLAKNGMT VILTARDEKK GLEAVEKLKR ENGFSDQAIL FHLLDVSNPD SIASLASFVK SHFGKLDILV NNAGVGGANV
101: NVDVLKSQIA EAGAPTDISK IMSDTYEIVE EAIRTNYYGV KRMCEAMIPL LEASDSPRIV SIASTMGMLQ NVSNEWAKGV LGDAENLTLE KIDEVMNEYL
201: KDYREGSLQD KGWPTVMSGY ILSKAGVIAL TRVLAKQNKT IIINCVCPGF VNTEINFNTG ILTVEEGAAS PVKLALVPNG HPSGLFFDRT NVSNF
Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)
001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
Arabidopsis Description
AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.