Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033230.1-P | Field mustard | cytosol | 87.12 | 87.12 |
| CDX90062 | Canola | cytosol | 87.12 | 87.12 |
| CDY15148 | Canola | cytosol | 87.12 | 87.12 |
| Bra032567.1-P | Field mustard | cytosol | 33.56 | 84.62 |
| Bra032573.1-P | Field mustard | cytosol | 33.9 | 74.63 |
| AT2G24190.2 | Thale cress | cytosol | 60.68 | 59.47 |
| PGSC0003DMT400000078 | Potato | cytosol | 60.0 | 59.0 |
| Solyc01g094220.2.1 | Tomato | cytosol | 60.0 | 59.0 |
| Solyc01g099560.2.1 | Tomato | cytosol | 33.9 | 56.5 |
| KRH40500 | Soybean | cytosol, nucleus | 55.93 | 56.12 |
| AT3G61220.3 | Thale cress | endoplasmic reticulum, vacuole | 61.02 | 55.05 |
| Solyc01g094210.2.1 | Tomato | cytosol | 53.9 | 53.54 |
| KRH65114 | Soybean | cytosol | 53.22 | 53.4 |
| PGSC0003DMT400000067 | Potato | golgi, peroxisome | 52.54 | 53.26 |
| PGSC0003DMT400088659 | Potato | cytosol | 20.68 | 51.69 |
| PGSC0003DMT400000080 | Potato | cytosol, mitochondrion, plastid | 52.54 | 50.65 |
| Solyc01g094240.2.1 | Tomato | cytosol | 54.24 | 50.31 |
| Solyc01g094270.2.1 | Tomato | cytosol, plastid | 53.22 | 49.84 |
| Solyc01g094260.2.1 | Tomato | cytosol | 53.22 | 49.22 |
| Solyc01g094250.2.1 | Tomato | cytosol | 52.54 | 48.59 |
| HORVU5Hr1G031560.1 | Barley | cytosol | 20.34 | 47.24 |
| EES11175 | Sorghum | cytosol, plastid | 47.8 | 47.16 |
| KXG31187 | Sorghum | mitochondrion | 47.46 | 47.14 |
| PGSC0003DMT400026580 | Potato | cytosol | 48.14 | 45.81 |
| TraesCS2D01G517700.1 | Wheat | cytosol | 47.46 | 45.45 |
| TraesCS2A01G516200.2 | Wheat | mitochondrion | 46.78 | 45.39 |
| TraesCS2B01G544800.1 | Wheat | cytosol | 47.12 | 45.13 |
| TraesCS2A01G370900.1 | Wheat | cytosol | 46.78 | 44.66 |
| TraesCS2D01G367200.1 | Wheat | cytosol | 46.78 | 44.66 |
| TraesCS2A01G371100.1 | Wheat | cytosol | 46.1 | 44.59 |
| Os04t0531900-01 | Rice | cytosol, plastid | 46.1 | 44.3 |
| Solyc10g017570.2.1 | Tomato | cytosol | 46.44 | 44.19 |
| EES11174 | Sorghum | cytosol | 46.1 | 43.87 |
| Os04t0532100-01 | Rice | cytosol | 45.76 | 43.69 |
| TraesCS2B01G388300.1 | Wheat | cytosol | 45.76 | 43.27 |
| EES07551 | Sorghum | cytosol | 44.41 | 43.23 |
| EES07552 | Sorghum | cytosol | 45.08 | 43.18 |
| TraesCS2B01G388100.1 | Wheat | cytosol | 46.1 | 43.17 |
| Os04t0531700-01 | Rice | mitochondrion | 15.93 | 43.12 |
| KXG26779 | Sorghum | cytosol | 45.42 | 43.09 |
| TraesCS2B01G388200.2 | Wheat | cytosol | 39.32 | 42.96 |
| TraesCS2B01G388600.1 | Wheat | cytosol, plastid | 44.41 | 42.81 |
| TraesCS7A01G111500.1 | Wheat | cytosol | 32.2 | 42.79 |
| EES11173 | Sorghum | cytosol | 45.08 | 42.77 |
| TraesCS2A01G371000.1 | Wheat | cytosol | 44.41 | 42.53 |
| OQU82017 | Sorghum | extracellular | 23.73 | 42.42 |
| KXG31133 | Sorghum | cytosol | 41.69 | 42.41 |
| EES07553 | Sorghum | cytosol | 44.41 | 42.39 |
| TraesCS2D01G367700.1 | Wheat | mitochondrion | 44.41 | 42.39 |
| TraesCS7A01G114100.1 | Wheat | cytosol | 44.07 | 42.35 |
| HORVU7Hr1G024270.5 | Barley | cytosol | 44.07 | 42.35 |
| TraesCS2A01G371200.1 | Wheat | cytosol | 43.73 | 42.3 |
| EES11171 | Sorghum | cytosol | 44.41 | 42.12 |
| Os04t0532400-01 | Rice | cytosol | 43.73 | 42.02 |
| TraesCS1D01G415900.1 | Wheat | cytosol | 44.41 | 41.99 |
| EES07554 | Sorghum | cytosol | 43.73 | 41.88 |
| HORVU2Hr1G091430.7 | Barley | cytosol | 44.41 | 41.85 |
| TraesCS2A01G371400.1 | Wheat | cytosol, plastid | 43.39 | 41.83 |
| HORVU2Hr1G091460.1 | Barley | cytosol, mitochondrion, plastid | 44.07 | 41.4 |
| TraesCS2D01G367600.2 | Wheat | plastid | 43.73 | 41.08 |
| TraesCS1B01G437500.1 | Wheat | cytosol | 43.39 | 41.03 |
| HORVU1Hr1G064390.1 | Barley | cytosol | 43.05 | 40.97 |
| TraesCS2B01G388700.1 | Wheat | cytosol, plastid | 42.37 | 40.85 |
| EES09734 | Sorghum | cytosol | 43.05 | 40.84 |
| HORVU1Hr1G089830.1 | Barley | cytosol | 43.05 | 40.71 |
| EES11167 | Sorghum | cytosol | 42.71 | 40.65 |
| TraesCS2D01G367800.1 | Wheat | cytosol, plastid | 42.03 | 40.52 |
| TraesCS2A01G099800.1 | Wheat | cytosol | 42.71 | 40.13 |
| GSMUA_Achr5P12200_001 | Banana | cytosol | 42.71 | 40.0 |
| TraesCS2D01G099300.1 | Wheat | cytosol | 42.37 | 39.81 |
| EER93229 | Sorghum | cytosol | 42.37 | 39.81 |
| TraesCS2B01G116700.1 | Wheat | mitochondrion | 42.37 | 39.81 |
| TraesCS2A01G371300.1 | Wheat | cytosol | 40.0 | 39.33 |
| HORVU2Hr1G091440.3 | Barley | mitochondrion | 46.78 | 38.76 |
| EER97757 | Sorghum | cytosol | 43.05 | 38.37 |
| TraesCS2D01G367400.1 | Wheat | plastid | 45.08 | 38.22 |
| HORVU2Hr1G114340.4 | Barley | endoplasmic reticulum, golgi | 47.12 | 38.08 |
| TraesCS1A01G408800.1 | Wheat | cytosol | 43.73 | 38.05 |
| AT5G61830.1 | Thale cress | cytosol | 40.68 | 37.97 |
| HORVU2Hr1G017120.1 | Barley | plastid | 46.1 | 37.06 |
| Os07t0685800-01 | Rice | plastid | 46.78 | 37.0 |
| AT5G51030.1 | Thale cress | cytosol | 39.32 | 36.94 |
| OQU85768 | Sorghum | cytosol | 44.75 | 36.77 |
| TraesCS2B01G117000.1 | Wheat | plastid | 46.78 | 36.6 |
| TraesCS2A01G371500.1 | Wheat | plastid | 41.36 | 36.42 |
| TraesCS2D01G099500.1 | Wheat | plastid | 46.1 | 36.17 |
| TraesCS2A01G100000.2 | Wheat | plastid | 46.1 | 36.17 |
| KXG36979 | Sorghum | plastid | 44.41 | 35.03 |
| TraesCS2B01G388500.1 | Wheat | cytosol, mitochondrion, nucleus | 17.63 | 32.7 |
| AT3G59710.2 | Thale cress | cytosol, peroxisome, plastid | 34.58 | 31.78 |
| EES17690 | Sorghum | cytosol | 17.63 | 31.14 |
| HORVU5Hr1G031520.2 | Barley | cytosol | 29.49 | 31.07 |
| Os02t0640600-00 | Rice | mitochondrion | 38.31 | 30.38 |
| GSMUA_Achr5P12210_001 | Banana | mitochondrion | 44.07 | 21.17 |
| Os04t0531750-00 | Rice | mitochondrion | 2.37 | 2.11 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | EntrezGene:839259 | UniProt:A0A178WIX4 | ProteinID:AEE27336.1 | EMBL:AF370343 |
| EMBL:AK317147 | ArrayExpress:AT1G01800 | EnsemblPlantsGene:AT1G01800 | RefSeq:AT1G01800 | TAIR:AT1G01800 | RefSeq:AT1G01800-TAIR-G |
| EnsemblPlants:AT1G01800.1 | TAIR:AT1G01800.1 | EMBL:AY133796 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0009505 | GO:GO:0030312 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_563635.1 | ProteinID:OAP18329.1 | PFAM:PF00106 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00080 | PRINTS:PR00081 | PANTHER:PTHR43490 | PANTHER:PTHR43490:SF43 | UniProt:Q94K30 | InterPro:SDR_fam |
| SUPFAM:SSF51735 | UniParc:UPI00000A398D | SEG:seg | : | : | : |
Description
AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
Coordinates
chr1:+:293246..295086
Molecular Weight (calculated)
31662.0 Da
IEP (calculated)
5.030
GRAVY (calculated)
0.021
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.