CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025922_P001	Maize	nucleus	89.39	89.39
EES11173	Sorghum	cytosol	76.21	76.21
EES11167	Sorghum	cytosol	75.56	75.81
EES11174	Sorghum	cytosol	74.6	74.84
Os04t0532100-01	Rice	cytosol	72.03	72.49
EES11175	Sorghum	cytosol, plastid	68.17	70.9
EER93229	Sorghum	cytosol	66.24	65.61
EES09734	Sorghum	cytosol	64.63	64.63
OQU82017	Sorghum	extracellular	34.08	64.24
EES17690	Sorghum	cytosol	32.8	61.08
EES07551	Sorghum	cytosol	56.27	57.76
EES07552	Sorghum	cytosol	56.59	57.14
EES07553	Sorghum	cytosol	55.63	55.99
EES07554	Sorghum	cytosol	54.98	55.52
KXG31133	Sorghum	cytosol	51.77	55.52
KRH40499	Soybean	cytosol	19.29	54.55
KXG26779	Sorghum	cytosol	54.02	54.02
Bra032567.1-P	Field mustard	cytosol	19.94	52.99
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	50.48	52.86
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	50.48	52.86
VIT_15s0046g03650.t01	Wine grape	cytosol	49.84	52.01
VIT_15s0046g03570.t01	Wine grape	plastid	49.52	51.85
KRH48198	Soybean	cytosol	47.91	51.56
VIT_15s0046g03550.t01	Wine grape	cytosol	48.87	51.01
PGSC0003DMT400000067	Potato	golgi, peroxisome	47.59	50.86
KRH00696	Soybean	mitochondrion	47.91	50.68
VIT_15s0046g03600.t01	Wine grape	cytosol	48.55	50.67
PGSC0003DMT400088659	Potato	cytosol	18.97	50.0
KRH48196	Soybean	cytosol	47.59	50.0
KRH00691	Soybean	cytosol	40.84	49.8
VIT_06s0061g00670.t01	Wine grape	plastid	48.55	49.67
KRH65113	Soybean	cytosol	47.59	49.5
KRH48194	Soybean	cytosol	47.27	49.33
KRH48202	Soybean	cytosol	47.27	49.16
KRH48206	Soybean	cytosol	47.91	48.85
OQU85768	Sorghum	cytosol	56.27	48.75
Bra032573.1-P	Field mustard	cytosol	20.9	48.51
CDX71758	Canola	cytosol	45.98	48.31
VIT_06s0061g00640.t01	Wine grape	cytosol	46.95	48.03
KRH40500	Soybean	cytosol, nucleus	45.34	47.96
Solyc11g071460.1.1	Tomato	cytosol	45.98	47.83
CDX89104	Canola	cytosol	42.44	47.83
Solyc01g094210.2.1	Tomato	cytosol	45.66	47.81
Bra014448.1-P	Field mustard	cytosol	45.66	47.81
Solyc01g094220.2.1	Tomato	cytosol	45.98	47.67
CDY48937	Canola	cytosol	45.34	47.64
Bra007585.1-P	Field mustard	cytosol	45.34	47.64
PGSC0003DMT400048181	Potato	cytosol	45.66	47.49
KRH65114	Soybean	cytosol	44.69	47.28
PGSC0003DMT400048179	Potato	cytosol	45.34	47.16
KRH17659	Soybean	cytosol	14.79	46.94
Solyc01g099560.2.1	Tomato	cytosol	26.69	46.89
KXG31187	Sorghum	mitochondrion	44.69	46.8
PGSC0003DMT400000080	Potato	cytosol, mitochondrion, plastid	45.98	46.73
PGSC0003DMT400000078	Potato	cytosol	45.02	46.67
PGSC0003DMT400047834	Potato	cytosol	44.69	46.49
CDY56927	Canola	endoplasmic reticulum, golgi	45.34	46.08
Solyc01g094270.2.1	Tomato	cytosol, plastid	46.3	45.71
KRH65115	Soybean	cytosol	47.59	45.54
VIT_02s0025g04510.t01	Wine grape	cytosol	28.94	45.23
AT2G24190.2	Thale cress	cytosol	43.73	45.18
Solyc01g094240.2.1	Tomato	cytosol	45.98	44.97
PGSC0003DMT400048175	Potato	cytosol, peroxisome, plastid	18.33	44.88
Solyc01g094260.2.1	Tomato	cytosol	45.66	44.51
AT1G01800.1	Thale cress	cytosol	42.12	44.41
Solyc01g094250.2.1	Tomato	cytosol	45.02	43.89
Bra033230.1-P	Field mustard	cytosol	41.48	43.73
CDY15148	Canola	cytosol	41.16	43.39
CDX90062	Canola	cytosol	40.84	43.05
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	44.69	42.51
EER97757	Sorghum	cytosol	44.37	41.69
Solyc10g017570.2.1	Tomato	cytosol	40.51	40.65
PGSC0003DMT400026580	Potato	cytosol	40.19	40.32
VIT_06s0009g01450.t01	Wine grape	plastid	31.51	38.89
OQU81866	Sorghum	cytosol, peroxisome, plastid	35.05	37.59
KRH40504	Soybean	endoplasmic reticulum	46.62	37.18
KXG36979	Sorghum	plastid	44.05	36.63
EES07125	Sorghum	cytosol, peroxisome, plastid	34.73	34.84
Solyc11g042710.1.1	Tomato	cytosol	17.68	34.81
EES04148	Sorghum	cytosol	32.15	30.86
VIT_15s0046g03530.t01	Wine grape	cytosol	24.12	21.93
VIT_06s0061g00620.t01	Wine grape	mitochondrion, plastid	48.87	20.46

Protein Annotations

EnsemblPlants:EES11171	EnsemblPlantsGene:SORBI_3006G158400	EntrezGene:8082883	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43490	PANTHER:PTHR43490:SF26	PFAM:PF00106	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ProteinID:EES11171	ProteinID:EES11171.1	RefSeq:XP_002446843.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0001A86EED
UniProt:C5YCW3	MapMan:50.1.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:51684396..51686118

Molecular Weight (calculated)

34167.4 Da

IEP (calculated)

4.649

GRAVY (calculated)

-0.185

Length

311 amino acids

Sequence
(BLAST)

001: MEGAISTFPS ARIAVVTGGN KGIGLEVCRQ LARNGTTVVL TARDETRGAA AVEELRELGL SDVMFHQLDI TDASSIARLA DFLKTRFGRL DILINNAAFG
101: GVEYARDPAG DGSVTSEEEL SGMDRDQRLE WLWRNTRETY DAAKKGLQTN YYGTKHVIEA LLPLLQASSD GRIVNVSSDF GLLRYFRNEE LKQELYNVDK
201: LTEERLDELL DMFLKDFEAG EVDARGWPAA FSAYKVAKAA MNAYSRILAT KQPALRVNCV HPGYIKTDIT LHSGLLTPEE GAANVVKVAL LPEGGVTGAF
301: FFEDSEEASF V

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.